RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 PNMA6AP0CW24 399 aaPredicted RBP11.69□□□□□ -0.54
AC055713.1-201ENST00000498967 RALAP11233 206 aa11.69□□□□□ -0.54
AC055713.1-201ENST00000498967 CXCR5P32302 372 aa11.69□□□□□ -0.54
AC055713.1-201ENST00000498967 PLA2G4AP47712 749 aa11.69□□□□□ -0.54
AC055713.1-201ENST00000498967 TTLL9Q3SXZ7 439 aa11.69□□□□□ -0.54
AC055713.1-201ENST00000498967 POLIQ9UNA4 740 aa11.69□□□□□ -0.54
AC055713.1-201ENST00000498967 PCDHGA4Q9Y5G9 962 aa11.69□□□□□ -0.54
AC055713.1-201ENST00000498967 FAM220BPB1ANY3 271 aa11.69□□□□□ -0.54
AC055713.1-201ENST00000498967 SMNDC1O75940 238 aaKnown RBP eCLIP11.69□□□□□ -0.54
AC055713.1-201ENST00000498967 NOS3P29474 1203 aa11.69□□□□□ -0.54
AC055713.1-201ENST00000498967 VHLP40337 213 aa11.69□□□□□ -0.54
AC055713.1-201ENST00000498967 DCAF4L1Q3SXM0 396 aa11.69□□□□□ -0.54
AC055713.1-201ENST00000498967 CHCHD6Q9BRQ6 235 aa11.69□□□□□ -0.54
AC055713.1-201ENST00000498967 PARD6BQ9BYG5 372 aa11.69□□□□□ -0.54
AC055713.1-201ENST00000498967 EPB41L4BQ9H329 900 aa11.69□□□□□ -0.54
AC055713.1-201ENST00000498967 SIK3Q9Y2K2 1263 aa11.69□□□□□ -0.54
AC055713.1-201ENST00000498967 MAP3K19Q56UN5 1328 aa11.69□□□□□ -0.54
AC055713.1-201ENST00000498967 SARSP49591 514 aaKnown RBP11.69□□□□□ -0.54
AC055713.1-201ENST00000498967 ICA1Q05084 483 aa11.69□□□□□ -0.54
AC055713.1-201ENST00000498967 ERAP2Q6P179 960 aa11.69□□□□□ -0.54
AC055713.1-201ENST00000498967 ARMCX6Q7L4S7 300 aa11.69□□□□□ -0.54
AC055713.1-201ENST00000498967 TMEM237Q96Q45 408 aa11.69□□□□□ -0.54
AC055713.1-201ENST00000498967 ZSCAN10Q96SZ4 725 aaPredicted RBP11.69□□□□□ -0.54
AC055713.1-201ENST00000498967 TAF1DQ9H5J8 278 aaPredicted RBP11.69□□□□□ -0.54
AC055713.1-201ENST00000498967 THAP9Q9H5L6 903 aa11.69□□□□□ -0.54
AC055713.1-201ENST00000498967 COPRSQ9NQ92 184 aa11.69□□□□□ -0.54
AC055713.1-201ENST00000498967 SKAP2O75563 359 aaPredicted RBP11.69□□□□□ -0.54
AC055713.1-201ENST00000498967 GRK3P35626 688 aa11.69□□□□□ -0.54
AC055713.1-201ENST00000498967 CDO1Q16878 200 aa11.69□□□□□ -0.54
AC055713.1-201ENST00000498967 ZNF658Q5TYW1 1059 aaPredicted RBP11.69□□□□□ -0.54
AC055713.1-201ENST00000498967 CC2D1AQ6P1N0 951 aaPredicted RBP11.69□□□□□ -0.54
AC055713.1-201ENST00000498967 DSN1Q9H410 356 aa11.69□□□□□ -0.54
AC055713.1-201ENST00000498967 GSTK1Q9Y2Q3 226 aa11.69□□□□□ -0.54
AC055713.1-201ENST00000498967 ZNF846Q147U1 533 aa11.69□□□□□ -0.54
AC055713.1-201ENST00000498967 IP6K2Q9UHH9 426 aa11.69□□□□□ -0.54
AC055713.1-201ENST00000498967 TTC7AQ9ULT0 858 aaPredicted RBP11.69□□□□□ -0.54
AC055713.1-201ENST00000498967 ING4Q9UNL4 249 aa11.69□□□□□ -0.54
AC055713.1-201ENST00000498967 KLRF2D3W0D1 207 aa11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 GFPT2O94808 682 aa11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 OSBPP22059 807 aa11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 BCAR1P56945 870 aa11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 SCARA3Q6AZY7 606 aa11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 CACTIN-AS1Q8N1I8 211 aa11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 RIBC1Q8N443 379 aaPredicted RBP11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 TSPYL6Q8N831 410 aa11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 RMND5AQ9H871 391 aa11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 PHF11Q9UIL8 331 aa11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 PNMA3Q9UL41 463 aa11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 PDE8AO60658 829 aa11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 CAND2O75155 1236 aa11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 GSTM1P09488 218 aa11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 MYL2P10916 166 aa11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 NPR3P17342 541 aa11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 GUCY1A2P33402 732 aa11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 ARHGEF7Q14155 803 aa11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 CERKLQ49MI3 558 aaPredicted RBP11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 MAP3K20Q9NYL2 800 aaKnown RBP11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 ZMYM3Q14202 1370 aa11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 AXIN1O15169 862 aa11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 NDUFB5O43674 189 aa11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 TUBA3CQ13748 450 aa11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 ALKBH5Q6P6C2 394 aaKnown RBP11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 EXOC3L1Q86VI1 746 aa11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 C17orf53Q8N3J3 647 aaPredicted RBP11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 RABGEF1Q9UJ41 708 aa11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 G3V2T6 193 aa11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 MFAP3LO75121 409 aa11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 SOAT1P35610 550 aa11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 MTTPP55157 894 aa11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 AP3B2Q13367 1082 aa11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 ZCCHC7Q8N3Z6 543 aaKnown RBP11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 CCDC33Q8N5R6 958 aa11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 VPS33BQ9H267 617 aa11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 SNX9Q9Y5X1 595 aa11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 C3orf70A6NLC5 250 aaPredicted RBP11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 ADCY6O43306 1168 aa11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 PRMT3O60678 531 aa11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 RTN3O95197 1032 aaPredicted RBP11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 AKT1P31749 480 aa11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 GPC5P78333 572 aa11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 SEMA3FQ13275 785 aa11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 BYSLQ13895 437 aaKnown RBP11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 RC3H1Q5TC82 1133 aaKnown RBP11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 EPHX4Q8IUS5 362 aa11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 ANKRD13CQ8N6S4 541 aa11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 TTC29Q8NA56 475 aaPredicted RBP11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 VPS35Q96QK1 796 aa11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 SLC9A2Q9UBY0 812 aa11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 CIDEBQ9UHD4 219 aa11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 BTN3A3O00478 584 aa11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 ZNF790Q6PG37 636 aa11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 MIGA2Q7L4E1 593 aa11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 SAMD3Q8N6K7 520 aa11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 FAM133AQ8N9E0 248 aa11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 SYMPKQ92797 1274 aaKnown RBP11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 FAM167AQ96KS9 214 aa11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 CEP170P1Q96L14 293 aa11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 FRMD8Q9BZ67 464 aaPredicted RBP11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 HSPBP1Q9NZL4 362 aa11.68□□□□□ -0.54
AC055713.1-201ENST00000498967 MED23Q9ULK4 1368 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms