RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, human

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11A-222	ENST00000498810	ZNF131	P52739	623 aa		11.61	□□□□□ -0.55
CDK11A-222	ENST00000498810	AMPD3	Q01432	767 aa		11.61	□□□□□ -0.55
CDK11A-222	ENST00000498810	MCL1	Q07820	350 aa		11.61	□□□□□ -0.55
CDK11A-222	ENST00000498810	TMEM31	Q5JXX7	168 aa		11.61	□□□□□ -0.55
CDK11A-222	ENST00000498810	SYCE2	Q6PIF2	218 aa		11.61	□□□□□ -0.55
CDK11A-222	ENST00000498810	PRSS55	Q6UWB4	352 aa	Predicted RBP	11.61	□□□□□ -0.55
CDK11A-222	ENST00000498810	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	11.61	□□□□□ -0.55
CDK11A-222	ENST00000498810	STXBP4	Q6ZWJ1	553 aa		11.61	□□□□□ -0.55
CDK11A-222	ENST00000498810	TAS1R1	Q7RTX1	841 aa		11.61	□□□□□ -0.55
CDK11A-222	ENST00000498810	PALB2	Q86YC2	1186 aa		11.61	□□□□□ -0.55
CDK11A-222	ENST00000498810	CCDC65	Q8IXS2	484 aa		11.61	□□□□□ -0.55
CDK11A-222	ENST00000498810	LRRC15	Q8TF66	581 aa		11.61	□□□□□ -0.55
CDK11A-222	ENST00000498810	DHX58	Q96C10	678 aa		11.61	□□□□□ -0.55
CDK11A-222	ENST00000498810	HVCN1	Q96D96	273 aa		11.61	□□□□□ -0.55
CDK11A-222	ENST00000498810	PPP1R10	Q96QC0	940 aa	Known RBP	11.61	□□□□□ -0.55
CDK11A-222	ENST00000498810	ADAM7	Q9H2U9	754 aa		11.61	□□□□□ -0.55
CDK11A-222	ENST00000498810	CD320	Q9NPF0	282 aa		11.61	□□□□□ -0.55
CDK11A-222	ENST00000498810	TBC1D7	Q9P0N9	293 aa		11.61	□□□□□ -0.55
CDK11A-222	ENST00000498810	FAM86C2P	A6NEL3	165 aa		11.6	□□□□□ -0.55
CDK11A-222	ENST00000498810	MYMK	A6NI61	221 aa		11.6	□□□□□ -0.55
CDK11A-222	ENST00000498810	OGT	O15294	1046 aa		11.6	□□□□□ -0.55
CDK11A-222	ENST00000498810	CLTA	P09496	248 aa		11.6	□□□□□ -0.55
CDK11A-222	ENST00000498810	ASIC1	P78348	528 aa		11.6	□□□□□ -0.55
CDK11A-222	ENST00000498810	KCNC3	Q14003	757 aa		11.6	□□□□□ -0.55
CDK11A-222	ENST00000498810	HERC4	Q5GLZ8	1057 aa	Predicted RBP	11.6	□□□□□ -0.55
CDK11A-222	ENST00000498810	ATL3	Q6DD88	541 aa		11.6	□□□□□ -0.55
CDK11A-222	ENST00000498810	ADAL	Q6DHV7	355 aa		11.6	□□□□□ -0.55
CDK11A-222	ENST00000498810	SLFN12L	Q6IEE8	588 aa		11.6	□□□□□ -0.55
CDK11A-222	ENST00000498810	DCLRE1A	Q6PJP8	1040 aa		11.6	□□□□□ -0.55
CDK11A-222	ENST00000498810	CCDC149	Q6ZUS6	474 aa		11.6	□□□□□ -0.55
CDK11A-222	ENST00000498810	RNF135	Q8IUD6	432 aa		11.6	□□□□□ -0.55
CDK11A-222	ENST00000498810	MAP4K3	Q8IVH8	894 aa		11.6	□□□□□ -0.55
CDK11A-222	ENST00000498810	IQUB	Q8NA54	791 aa		11.6	□□□□□ -0.55
CDK11A-222	ENST00000498810	SLC22A17	Q8WUG5	538 aa		11.6	□□□□□ -0.55
CDK11A-222	ENST00000498810	POMGNT1	Q8WZA1	660 aa		11.6	□□□□□ -0.55
CDK11A-222	ENST00000498810	ACSF2	Q96CM8	615 aa	Predicted RBP	11.6	□□□□□ -0.55
CDK11A-222	ENST00000498810	CXCL16	Q9H2A7	254 aa		11.6	□□□□□ -0.55
CDK11A-222	ENST00000498810	CUEDC2	Q9H467	287 aa		11.6	□□□□□ -0.55
CDK11A-222	ENST00000498810	POMK	Q9H5K3	350 aa		11.6	□□□□□ -0.55
CDK11A-222	ENST00000498810	EPHX3	Q9H6B9	360 aa		11.6	□□□□□ -0.55
CDK11A-222	ENST00000498810	PTPRH	Q9HD43	1115 aa		11.6	□□□□□ -0.55
CDK11A-222	ENST00000498810	PANK4	Q9NVE7	773 aa		11.6	□□□□□ -0.55
CDK11A-222	ENST00000498810	CNTN3	Q9P232	1028 aa		11.6	□□□□□ -0.55
CDK11A-222	ENST00000498810	MUTYH	Q9UIF7	546 aa		11.6	□□□□□ -0.55
CDK11A-222	ENST00000498810	ATP6V1D	Q9Y5K8	247 aa		11.6	□□□□□ -0.55
CDK11A-222	ENST00000498810	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	11.6	□□□□□ -0.55
CDK11A-222	ENST00000498810	MORC2	Q9Y6X9	1032 aa	Predicted RBP	11.6	□□□□□ -0.55
CDK11A-222	ENST00000498810	BDP1	A6H8Y1	2624 aa		11.6	□□□□□ -0.55
CDK11A-222	ENST00000498810	SPTBN5	Q9NRC6	3674 aa	Known RBP	11.6	□□□□□ -0.55
CDK11A-222	ENST00000498810	C5orf42	Q9H799	3197 aa		11.59	□□□□□ -0.55
CDK11A-222	ENST00000498810	TMEM189-UBE2V1	I3L0A0	370 aa		11.59	□□□□□ -0.55
CDK11A-222	ENST00000498810	BRD1	O95696	1058 aa		11.59	□□□□□ -0.55
CDK11A-222	ENST00000498810	SPATA31D3	P0C874	917 aa		11.59	□□□□□ -0.55
CDK11A-222	ENST00000498810	KRT85	P78386	507 aa		11.59	□□□□□ -0.55
CDK11A-222	ENST00000498810	SPAG1	Q07617	926 aa		11.59	□□□□□ -0.55
CDK11A-222	ENST00000498810	ALCAM	Q13740	583 aa		11.59	□□□□□ -0.55
CDK11A-222	ENST00000498810	TMEM259	Q4ZIN3	620 aa		11.59	□□□□□ -0.55
CDK11A-222	ENST00000498810	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	11.59	□□□□□ -0.55
CDK11A-222	ENST00000498810	RTP2	Q5QGT7	225 aa		11.59	□□□□□ -0.55
CDK11A-222	ENST00000498810	KIAA0319	Q5VV43	1072 aa		11.59	□□□□□ -0.55
CDK11A-222	ENST00000498810	SPATA31D4	Q6ZUB0	917 aa		11.59	□□□□□ -0.55
CDK11A-222	ENST00000498810	RNF168	Q8IYW5	571 aa	Predicted RBP	11.59	□□□□□ -0.55
CDK11A-222	ENST00000498810	CCDC116	Q8IYX3	515 aa		11.59	□□□□□ -0.55
CDK11A-222	ENST00000498810	CEP57L1	Q8IYX8	460 aa		11.59	□□□□□ -0.55
CDK11A-222	ENST00000498810	PIK3R5	Q8WYR1	880 aa		11.59	□□□□□ -0.55
CDK11A-222	ENST00000498810	SUSD6	Q92537	303 aa		11.59	□□□□□ -0.55
CDK11A-222	ENST00000498810	SMG7	Q92540	1137 aa	Known RBP	11.59	□□□□□ -0.55
CDK11A-222	ENST00000498810	STAM	Q92783	540 aa		11.59	□□□□□ -0.55
CDK11A-222	ENST00000498810	C18orf25	Q96B23	403 aa	Predicted RBP	11.59	□□□□□ -0.55
CDK11A-222	ENST00000498810	ACCS	Q96QU6	501 aa		11.59	□□□□□ -0.55
CDK11A-222	ENST00000498810	PYM1	Q9BRP8	204 aa	Known RBP	11.59	□□□□□ -0.55
CDK11A-222	ENST00000498810	S1PR5	Q9H228	398 aa		11.59	□□□□□ -0.55
CDK11A-222	ENST00000498810	TNMD	Q9H2S6	317 aa		11.59	□□□□□ -0.55
CDK11A-222	ENST00000498810	FNIP2	Q9P278	1114 aa		11.59	□□□□□ -0.55
CDK11A-222	ENST00000498810	TUBGCP4	Q9UGJ1	667 aa		11.59	□□□□□ -0.55
CDK11A-222	ENST00000498810	CDH22	Q9UJ99	828 aa		11.59	□□□□□ -0.55
CDK11A-222	ENST00000498810	UBQLN1	Q9UMX0	589 aa	Known RBP	11.59	□□□□□ -0.55
CDK11A-222	ENST00000498810	POLI	Q9UNA4	740 aa		11.59	□□□□□ -0.55
CDK11A-222	ENST00000498810	CCDC195	A0A1B0GUA6	201 aa		11.58	□□□□□ -0.56
CDK11A-222	ENST00000498810		I3L4J1	428 aa		11.58	□□□□□ -0.56
CDK11A-222	ENST00000498810	ABLIM1	O14639	778 aa		11.58	□□□□□ -0.56
CDK11A-222	ENST00000498810	PIGR	P01833	764 aa		11.58	□□□□□ -0.56
CDK11A-222	ENST00000498810	KCNE1	P15382	129 aa		11.58	□□□□□ -0.56
CDK11A-222	ENST00000498810	TKT	P29401	623 aa	Known RBP	11.58	□□□□□ -0.56
CDK11A-222	ENST00000498810	GBP2	P32456	591 aa	Predicted RBP	11.58	□□□□□ -0.56
CDK11A-222	ENST00000498810	RPL9	P32969	192 aa	Known RBP	11.58	□□□□□ -0.56
CDK11A-222	ENST00000498810	TNFSF9	P41273	254 aa		11.58	□□□□□ -0.56
CDK11A-222	ENST00000498810	BRCC3	P46736	316 aa		11.58	□□□□□ -0.56
CDK11A-222	ENST00000498810	ARPP19	P56211	112 aa		11.58	□□□□□ -0.56
CDK11A-222	ENST00000498810	GTF2B	Q00403	316 aa		11.58	□□□□□ -0.56
CDK11A-222	ENST00000498810	DNM1	Q05193	864 aa	Known RBP	11.58	□□□□□ -0.56
CDK11A-222	ENST00000498810	PTK2	Q05397	1052 aa		11.58	□□□□□ -0.56
CDK11A-222	ENST00000498810	SOX4	Q06945	474 aa	Predicted RBP	11.58	□□□□□ -0.56
CDK11A-222	ENST00000498810	PKP1	Q13835	747 aa		11.58	□□□□□ -0.56
CDK11A-222	ENST00000498810	NAB2	Q15742	525 aa		11.58	□□□□□ -0.56
CDK11A-222	ENST00000498810	UPP1	Q16831	310 aa		11.58	□□□□□ -0.56
CDK11A-222	ENST00000498810	PPM1L	Q5SGD2	360 aa		11.58	□□□□□ -0.56
CDK11A-222	ENST00000498810	L1TD1	Q5T7N2	865 aa	Known RBP	11.58	□□□□□ -0.56
CDK11A-222	ENST00000498810	KANK3	Q6NY19	840 aa		11.58	□□□□□ -0.56
CDK11A-222	ENST00000498810	ANKS3	Q6ZW76	656 aa		11.58	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms