RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 SUMO1P63165 101 aaKnown RBP4.23□□□□□ -1.73
CLTC-209ENST00000498711 IRX3P78415 501 aaPredicted RBP4.23□□□□□ -1.73
CLTC-209ENST00000498711 RIPK1Q13546 671 aa4.23□□□□□ -1.73
CLTC-209ENST00000498711 LRRC41Q15345 812 aa4.23□□□□□ -1.73
CLTC-209ENST00000498711 EPHA7Q15375 998 aa4.23□□□□□ -1.73
CLTC-209ENST00000498711 HP1BP3Q5SSJ5 553 aaPredicted RBP4.23□□□□□ -1.73
CLTC-209ENST00000498711 TXNDC11Q6PKC3 985 aa4.23□□□□□ -1.73
CLTC-209ENST00000498711 ZNF571Q7Z3V5 609 aaPredicted RBP4.23□□□□□ -1.73
CLTC-209ENST00000498711 FAM228AQ86W67 206 aa4.23□□□□□ -1.73
CLTC-209ENST00000498711 PHACTR4Q8IZ21 702 aa4.23□□□□□ -1.73
CLTC-209ENST00000498711 RTKN2Q8IZC4 609 aa4.23□□□□□ -1.73
CLTC-209ENST00000498711 TTLL6Q8N841 843 aa4.23□□□□□ -1.73
CLTC-209ENST00000498711 FAM13CQ8NE31 585 aa4.23□□□□□ -1.73
CLTC-209ENST00000498711 ATP8B4Q8TF62 1192 aa4.23□□□□□ -1.73
CLTC-209ENST00000498711 SCFD1Q8WVM8 642 aa4.23□□□□□ -1.73
CLTC-209ENST00000498711 CCT6BQ92526 530 aa4.23□□□□□ -1.73
CLTC-209ENST00000498711 HPS3Q969F9 1004 aa4.23□□□□□ -1.73
CLTC-209ENST00000498711 LRRC45Q96CN5 670 aa4.23□□□□□ -1.73
CLTC-209ENST00000498711 DYNLL2Q96FJ2 89 aa4.23□□□□□ -1.73
CLTC-209ENST00000498711 MDFIQ99750 246 aa4.23□□□□□ -1.73
CLTC-209ENST00000498711 APBA2Q99767 749 aa4.23□□□□□ -1.73
CLTC-209ENST00000498711 WNT10AQ9GZT5 417 aa4.23□□□□□ -1.73
CLTC-209ENST00000498711 NEUROG2Q9H2A3 272 aa4.23□□□□□ -1.73
CLTC-209ENST00000498711 DEF6Q9H4E7 631 aa4.23□□□□□ -1.73
CLTC-209ENST00000498711 ZDHHC18Q9NUE0 388 aa4.23□□□□□ -1.73
CLTC-209ENST00000498711 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.23□□□□□ -1.73
CLTC-209ENST00000498711 SUCOQ9UBS9 1254 aaKnown RBP4.23□□□□□ -1.73
CLTC-209ENST00000498711 CNOT8Q9UFF9 292 aaKnown RBP4.23□□□□□ -1.73
CLTC-209ENST00000498711 DDX20Q9UHI6 824 aaKnown RBP4.23□□□□□ -1.73
CLTC-209ENST00000498711 SFMBT1Q9UHJ3 866 aa4.23□□□□□ -1.73
CLTC-209ENST00000498711 CNOT7Q9UIV1 285 aaKnown RBP4.23□□□□□ -1.73
CLTC-209ENST00000498711 PCDHA3Q9Y5H8 950 aa4.23□□□□□ -1.73
CLTC-209ENST00000498711 SLX4Q8IY92 1834 aa4.23□□□□□ -1.73
CLTC-209ENST00000498711 MYH7BA7E2Y1 1941 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 F8W031 263 aaPredicted RBP4.22□□□□□ -1.73
CLTC-209ENST00000498711 H0YIN7 160 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 LINC01387J3KSC0 135 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 ASAP2O43150 1006 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 TSPAN6O43657 245 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 RASGRP1O95267 797 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 LDHCP07864 332 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 PDHBP11177 359 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 DPEP1P16444 411 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 MRPL12P52815 198 aaKnown RBP4.22□□□□□ -1.73
CLTC-209ENST00000498711 EIF3BP55884 814 aaKnown RBP4.22□□□□□ -1.73
CLTC-209ENST00000498711 PPP2R2AP63151 447 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 GUCY2DQ02846 1103 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 SPIRE1Q08AE8 756 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 TRADDQ15628 312 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 CALCRLQ16602 461 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 IFI16Q16666 785 aaKnown RBP4.22□□□□□ -1.73
CLTC-209ENST00000498711 ASPRV1Q53RT3 343 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 ERMARDQ5T6L9 678 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 DUPD1Q68J44 220 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 HEATR3Q7Z4Q2 680 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 NT5DC3Q86UY8 548 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 AMIGO3Q86WK7 504 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 C12orf40Q86WS4 652 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 CCDC50Q8IVM0 306 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 MCATQ8IVS2 390 aaKnown RBP4.22□□□□□ -1.73
CLTC-209ENST00000498711 SH2D3CQ8N5H7 860 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 ZKSCAN4Q969J2 545 aaPredicted RBP4.22□□□□□ -1.73
CLTC-209ENST00000498711 CYFIP2Q96F07 1278 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 WDR89Q96FK6 387 aaPredicted RBP4.22□□□□□ -1.73
CLTC-209ENST00000498711 GDAP1L1Q96MZ0 367 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 ZNF317Q96PQ6 595 aaPredicted RBP4.22□□□□□ -1.73
CLTC-209ENST00000498711 PLIN2Q99541 437 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 LSM14BQ9BX40 385 aaKnown RBP4.22□□□□□ -1.73
CLTC-209ENST00000498711 FAM129AQ9BZQ8 928 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 NT5C3AQ9H0P0 336 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 MMRN2Q9H8L6 949 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 CNOT10Q9H9A5 744 aaKnown RBP4.22□□□□□ -1.73
CLTC-209ENST00000498711 ZNF287Q9HBT7 754 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 FAM114A2Q9NRY5 505 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 FAM207AQ9NSI2 230 aaPredicted RBP4.22□□□□□ -1.73
CLTC-209ENST00000498711 MCM9Q9NXL9 1143 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 KDM3AQ9Y4C1 1321 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 FRMPD4Q14CM0 1322 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 CDC14CA4D256 554 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 ANKRD65E5RJM6 399 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 F8VZ95 297 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 DNM1LO00429 736 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 PDXKO00764 312 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 NDUFAB1O14561 156 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 TBX3O15119 743 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 PPP1R11O60927 126 aaPredicted RBP4.22□□□□□ -1.73
CLTC-209ENST00000498711 OAS1P00973 400 aaKnown RBP4.22□□□□□ -1.73
CLTC-209ENST00000498711 KRT14P02533 472 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 EPHX1P07099 455 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 CTSBP07858 339 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 FGFR1P11362 822 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 ALADP13716 330 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 CYP11B2P19099 503 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 PON1P27169 355 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 NAPAP54920 295 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 GUCY1A3Q02108 690 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 ITIH4Q14624 930 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 RPS6KA1Q15418 735 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 CLUL1Q15846 466 aa4.22□□□□□ -1.73
CLTC-209ENST00000498711 ASIC2Q16515 512 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms