RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 ATG4AQ8WYN0 398 aa17.42■□□□□ 0.38
COL6A1-206ENST00000498614 TGS1Q96RS0 853 aaKnown RBP17.42■□□□□ 0.38
COL6A1-206ENST00000498614 COL11A1P12107 1806 aaPredicted RBP17.42■□□□□ 0.38
COL6A1-206ENST00000498614 HNRNPDLO14979 420 aaKnown RBP17.42■□□□□ 0.38
COL6A1-206ENST00000498614 USP2O75604 605 aaPredicted RBP17.42■□□□□ 0.38
COL6A1-206ENST00000498614 TTC4O95801 387 aa17.42■□□□□ 0.38
COL6A1-206ENST00000498614 CYP1A2P05177 515 aa17.42■□□□□ 0.38
COL6A1-206ENST00000498614 CETPP11597 493 aa17.42■□□□□ 0.38
COL6A1-206ENST00000498614 KRT5P13647 590 aa17.42■□□□□ 0.38
COL6A1-206ENST00000498614 SGO2Q562F6 1265 aa17.42■□□□□ 0.38
COL6A1-206ENST00000498614 SNRNP48Q6IEG0 339 aaKnown RBP17.42■□□□□ 0.38
COL6A1-206ENST00000498614 KIFAP3Q92845 792 aa17.42■□□□□ 0.38
COL6A1-206ENST00000498614 KLRG1Q96E93 195 aa17.42■□□□□ 0.38
COL6A1-206ENST00000498614 MFSD14AQ96MC6 490 aa17.42■□□□□ 0.38
COL6A1-206ENST00000498614 ZNF408Q9H9D4 720 aa17.42■□□□□ 0.38
COL6A1-206ENST00000498614 CHST7Q9NS84 486 aa17.42■□□□□ 0.38
COL6A1-206ENST00000498614 PARP14Q460N5 1801 aa17.41■□□□□ 0.38
COL6A1-206ENST00000498614 IVDP26440 423 aa17.41■□□□□ 0.38
COL6A1-206ENST00000498614 ATP5DP30049 168 aa17.41■□□□□ 0.38
COL6A1-206ENST00000498614 ADCY1Q08828 1119 aa17.41■□□□□ 0.38
COL6A1-206ENST00000498614 SUPT20HL1Q3ZLR7 823 aa17.41■□□□□ 0.38
COL6A1-206ENST00000498614 DCAF15Q66K64 600 aa17.41■□□□□ 0.38
COL6A1-206ENST00000498614 LMBRD2Q68DH5 695 aaPredicted RBP17.41■□□□□ 0.38
COL6A1-206ENST00000498614 BICD1Q96G01 975 aa17.41■□□□□ 0.38
COL6A1-206ENST00000498614 IFT74Q96LB3 600 aa17.41■□□□□ 0.38
COL6A1-206ENST00000498614 FAM213AQ9BRX8 229 aa17.41■□□□□ 0.38
COL6A1-206ENST00000498614 SLC24A3Q9HC58 644 aa17.41■□□□□ 0.38
COL6A1-206ENST00000498614 ADAM22Q9P0K1 906 aa17.41■□□□□ 0.38
COL6A1-206ENST00000498614 TBK1Q9UHD2 729 aa17.41■□□□□ 0.38
COL6A1-206ENST00000498614 SEPT9Q9UHD8 586 aaPredicted RBP17.41■□□□□ 0.38
COL6A1-206ENST00000498614 GTF3C4Q9UKN8 822 aa17.41■□□□□ 0.38
COL6A1-206ENST00000498614 ARID2Q68CP9 1835 aa17.41■□□□□ 0.38
COL6A1-206ENST00000498614 FSCN2O14926 492 aa17.4■□□□□ 0.38
COL6A1-206ENST00000498614 RGS20O76081 388 aa17.4■□□□□ 0.38
COL6A1-206ENST00000498614 STBD1O95210 358 aa17.4■□□□□ 0.38
COL6A1-206ENST00000498614 KCNA2P16389 499 aa17.4■□□□□ 0.38
COL6A1-206ENST00000498614 ITIH2P19823 946 aa17.4■□□□□ 0.38
COL6A1-206ENST00000498614 ITGA8P53708 1063 aa17.4■□□□□ 0.38
COL6A1-206ENST00000498614 TMC2Q8TDI7 906 aa17.4■□□□□ 0.38
COL6A1-206ENST00000498614 SPIRE2Q8WWL2 714 aa17.4■□□□□ 0.38
COL6A1-206ENST00000498614 DDX1Q92499 740 aaKnown RBP17.4■□□□□ 0.38
COL6A1-206ENST00000498614 SLCO2A1Q92959 643 aa17.4■□□□□ 0.38
COL6A1-206ENST00000498614 GPRASP2Q96D09 838 aa17.4■□□□□ 0.38
COL6A1-206ENST00000498614 FBXL18Q96ME1 805 aa17.4■□□□□ 0.38
COL6A1-206ENST00000498614 BATF3Q9NR55 127 aa17.4■□□□□ 0.38
COL6A1-206ENST00000498614 SLC5A4Q9NY91 659 aa17.4■□□□□ 0.38
COL6A1-206ENST00000498614 STX2P32856 288 aa17.4■□□□□ 0.38
COL6A1-206ENST00000498614 ECHDC2Q86YB7 292 aa17.4■□□□□ 0.38
COL6A1-206ENST00000498614 CCDC60Q8IWA6 550 aaPredicted RBP17.4■□□□□ 0.38
COL6A1-206ENST00000498614 GPD1LQ8N335 351 aa17.4■□□□□ 0.38
COL6A1-206ENST00000498614 RDM1Q8NG50 284 aa17.4■□□□□ 0.38
COL6A1-206ENST00000498614 CDCA5Q96FF9 252 aa17.4■□□□□ 0.38
COL6A1-206ENST00000498614 SNF8Q96H20 258 aa17.4■□□□□ 0.38
COL6A1-206ENST00000498614 NTPCRQ9BSD7 190 aaKnown RBP17.4■□□□□ 0.38
COL6A1-206ENST00000498614 HERPUD2Q9BSE4 406 aa17.4■□□□□ 0.38
COL6A1-206ENST00000498614 XPNPEP1Q9NQW7 623 aa17.4■□□□□ 0.38
COL6A1-206ENST00000498614 NINJ2Q9NZG7 142 aa17.4■□□□□ 0.38
COL6A1-206ENST00000498614 THAP12O43422 761 aa17.39■□□□□ 0.38
COL6A1-206ENST00000498614 BACE1P56817 501 aa17.39■□□□□ 0.38
COL6A1-206ENST00000498614 MCCD1P59942 119 aaPredicted RBP17.39■□□□□ 0.38
COL6A1-206ENST00000498614 TAS1R3Q7RTX0 852 aa17.39■□□□□ 0.38
COL6A1-206ENST00000498614 ZC3H15Q8WU90 426 aaKnown RBP17.39■□□□□ 0.38
COL6A1-206ENST00000498614 CNKSR2Q8WXI2 1034 aa17.39■□□□□ 0.38
COL6A1-206ENST00000498614 ATP6V0A1Q93050 837 aa17.39■□□□□ 0.38
COL6A1-206ENST00000498614 PLCD4Q9BRC7 762 aa17.39■□□□□ 0.38
COL6A1-206ENST00000498614 FOXN2P32314 431 aa17.39■□□□□ 0.37
COL6A1-206ENST00000498614 VPS41P49754 854 aa17.39■□□□□ 0.37
COL6A1-206ENST00000498614 PRKCEQ02156 737 aa17.39■□□□□ 0.37
COL6A1-206ENST00000498614 TTLL12Q14166 644 aaPredicted RBP17.39■□□□□ 0.37
COL6A1-206ENST00000498614 ACAD10Q6JQN1 1059 aa17.39■□□□□ 0.37
COL6A1-206ENST00000498614 PHLDB2Q86SQ0 1253 aa17.39■□□□□ 0.37
COL6A1-206ENST00000498614 SRRM1Q8IYB3 904 aaKnown RBP17.39■□□□□ 0.37
COL6A1-206ENST00000498614 SENP7Q9BQF6 1050 aa17.39■□□□□ 0.37
COL6A1-206ENST00000498614 PPP2R3BQ9Y5P8 575 aa17.39■□□□□ 0.37
COL6A1-206ENST00000498614 PSAPP07602 524 aa17.38■□□□□ 0.37
COL6A1-206ENST00000498614 CCNB1P14635 433 aa17.38■□□□□ 0.37
COL6A1-206ENST00000498614 HMGCS2P54868 508 aa17.38■□□□□ 0.37
COL6A1-206ENST00000498614 LACTBP83111 547 aaPredicted RBP17.38■□□□□ 0.37
COL6A1-206ENST00000498614 PTK6Q13882 451 aa17.38■□□□□ 0.37
COL6A1-206ENST00000498614 RNF43Q68DV7 783 aa17.38■□□□□ 0.37
COL6A1-206ENST00000498614 MAGEB18Q96M61 343 aa17.38■□□□□ 0.37
COL6A1-206ENST00000498614 POLR3FQ9H1D9 316 aaPredicted RBP17.38■□□□□ 0.37
COL6A1-206ENST00000498614 JPH1Q9HDC5 661 aaPredicted RBP17.38■□□□□ 0.37
COL6A1-206ENST00000498614 KLHL14Q9P2G3 628 aa17.38■□□□□ 0.37
COL6A1-206ENST00000498614 UVRAGQ9P2Y5 699 aa17.38■□□□□ 0.37
COL6A1-206ENST00000498614 NAALADL1Q9UQQ1 740 aa17.38■□□□□ 0.37
COL6A1-206ENST00000498614 SCN4AP35499 1836 aa17.38■□□□□ 0.37
COL6A1-206ENST00000498614 TAC1P20366 129 aa17.38■□□□□ 0.37
COL6A1-206ENST00000498614 MTFR1Q15390 333 aa17.38■□□□□ 0.37
COL6A1-206ENST00000498614 CLEC16AQ2KHT3 1053 aa17.38■□□□□ 0.37
COL6A1-206ENST00000498614 MTERF2Q49AM1 385 aa17.38■□□□□ 0.37
COL6A1-206ENST00000498614 XRRA1Q6P2D8 792 aa17.38■□□□□ 0.37
COL6A1-206ENST00000498614 USP37Q86T82 979 aa17.38■□□□□ 0.37
COL6A1-206ENST00000498614 REPS2Q8NFH8 660 aa17.38■□□□□ 0.37
COL6A1-206ENST00000498614 ZNF516Q92618 1163 aa17.38■□□□□ 0.37
COL6A1-206ENST00000498614 UTP4Q969X6 686 aaKnown RBP17.38■□□□□ 0.37
COL6A1-206ENST00000498614 TRIM7Q9C029 511 aa17.38■□□□□ 0.37
COL6A1-206ENST00000498614 C17orf75Q9HAS0 396 aa17.38■□□□□ 0.37
COL6A1-206ENST00000498614 GINM1Q9NU53 330 aa17.38■□□□□ 0.37
COL6A1-206ENST00000498614 ZNF112Q9UJU3 913 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms