RNA–Protein interactions for RNA: ENST00000498607.2

SCG5-209, Transcript of secretogranin V, humanhuman

TSL 2

Gene SCG5, Length 853 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG5-209ENST00000498607 FAXDC2Q96IV6 333 aa12.53□□□□□ -0.4
SCG5-209ENST00000498607 ZNF560Q96MR9 790 aa12.53□□□□□ -0.4
SCG5-209ENST00000498607 DNAJC7Q99615 494 aa12.53□□□□□ -0.4
SCG5-209ENST00000498607 NIF3L1Q9GZT8 377 aa12.53□□□□□ -0.4
SCG5-209ENST00000498607 NUCKS1Q9H1E3 243 aaKnown RBP12.53□□□□□ -0.4
SCG5-209ENST00000498607 APOBEC3GQ9HC16 384 aaKnown RBP12.53□□□□□ -0.4
SCG5-209ENST00000498607 UBE2TQ9NPD8 197 aaPredicted RBP12.53□□□□□ -0.4
SCG5-209ENST00000498607 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.53□□□□□ -0.4
SCG5-209ENST00000498607 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.53□□□□□ -0.4
SCG5-209ENST00000498607 KANSL3Q9P2N6 904 aa12.53□□□□□ -0.4
SCG5-209ENST00000498607 AJAP1Q9UKB5 411 aaPredicted RBP12.53□□□□□ -0.4
SCG5-209ENST00000498607 NUB1Q9Y5A7 615 aa12.53□□□□□ -0.4
SCG5-209ENST00000498607 PTPRSQ13332 1948 aa12.52□□□□□ -0.4
SCG5-209ENST00000498607 PIRO00625 290 aa12.52□□□□□ -0.41
SCG5-209ENST00000498607 PPEF2O14830 753 aa12.52□□□□□ -0.41
SCG5-209ENST00000498607 CLSTN1O94985 981 aa12.52□□□□□ -0.41
SCG5-209ENST00000498607 AMHP03971 560 aa12.52□□□□□ -0.41
SCG5-209ENST00000498607 ACRP10323 421 aa12.52□□□□□ -0.41
SCG5-209ENST00000498607 TBXAS1P24557 533 aaPredicted RBP12.52□□□□□ -0.41
SCG5-209ENST00000498607 RPL9P32969 192 aaKnown RBP12.52□□□□□ -0.41
SCG5-209ENST00000498607 PNPLA4P41247 253 aa12.52□□□□□ -0.41
SCG5-209ENST00000498607 MFAP3P55082 362 aa12.52□□□□□ -0.41
SCG5-209ENST00000498607 ADKP55263 362 aaKnown RBP12.52□□□□□ -0.41
SCG5-209ENST00000498607 JAM2P57087 298 aa12.52□□□□□ -0.41
SCG5-209ENST00000498607 WDR5P61964 334 aaKnown RBP12.52□□□□□ -0.41
SCG5-209ENST00000498607 GOLGA8FQ08AF8 430 aa12.52□□□□□ -0.41
SCG5-209ENST00000498607 GOLGA8DPQ0D2H9 430 aa12.52□□□□□ -0.41
SCG5-209ENST00000498607 MYO1EQ12965 1108 aa12.52□□□□□ -0.41
SCG5-209ENST00000498607 TUSC3Q13454 348 aa12.52□□□□□ -0.41
SCG5-209ENST00000498607 CUL2Q13617 745 aa12.52□□□□□ -0.41
SCG5-209ENST00000498607 RAPGEF1Q13905 1077 aa12.52□□□□□ -0.41
SCG5-209ENST00000498607 DRAP1Q14919 205 aaPredicted RBP12.52□□□□□ -0.41
SCG5-209ENST00000498607 ZNF667Q5HYK9 610 aa12.52□□□□□ -0.41
SCG5-209ENST00000498607 SCARA3Q6AZY7 606 aa12.52□□□□□ -0.41
SCG5-209ENST00000498607 SPOPLQ6IQ16 392 aa12.52□□□□□ -0.41
SCG5-209ENST00000498607 PSRC1Q6PGN9 363 aaPredicted RBP12.52□□□□□ -0.41
SCG5-209ENST00000498607 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.52□□□□□ -0.41
SCG5-209ENST00000498607 RRAGAQ7L523 313 aa12.52□□□□□ -0.41
SCG5-209ENST00000498607 FMNL3Q8IVF7 1028 aa12.52□□□□□ -0.41
SCG5-209ENST00000498607 TMEM130Q8N3G9 435 aa12.52□□□□□ -0.41
SCG5-209ENST00000498607 OR8K1Q8NGG5 319 aa12.52□□□□□ -0.41
SCG5-209ENST00000498607 SYN2Q92777 582 aaPredicted RBP12.52□□□□□ -0.41
SCG5-209ENST00000498607 KREMEN1Q96MU8 473 aa12.52□□□□□ -0.41
SCG5-209ENST00000498607 UROC1Q96N76 676 aa12.52□□□□□ -0.41
SCG5-209ENST00000498607 SPAG5Q96R06 1193 aa12.52□□□□□ -0.41
SCG5-209ENST00000498607 PANX2Q96RD6 677 aa12.52□□□□□ -0.41
SCG5-209ENST00000498607 MRPL9Q9BYD2 267 aaKnown RBP12.52□□□□□ -0.41
SCG5-209ENST00000498607 STK33Q9BYT3 514 aa12.52□□□□□ -0.41
SCG5-209ENST00000498607 GOLGA2P5Q9HBQ8 144 aa12.52□□□□□ -0.41
SCG5-209ENST00000498607 TBC1D13Q9NVG8 400 aa12.52□□□□□ -0.41
SCG5-209ENST00000498607 ZMYND8Q9ULU4 1186 aaPredicted RBP12.52□□□□□ -0.41
SCG5-209ENST00000498607 COL4A6Q14031 1691 aa12.51□□□□□ -0.41
SCG5-209ENST00000498607 LRRC53A6NM62 1247 aa12.51□□□□□ -0.41
SCG5-209ENST00000498607 F8VZ95 297 aa12.51□□□□□ -0.41
SCG5-209ENST00000498607 POMCP01189 267 aa12.51□□□□□ -0.41
SCG5-209ENST00000498607 FGBP02675 491 aa12.51□□□□□ -0.41
SCG5-209ENST00000498607 P4HA1P13674 534 aa12.51□□□□□ -0.41
SCG5-209ENST00000498607 SYN1P17600 705 aa12.51□□□□□ -0.41
SCG5-209ENST00000498607 FECHP22830 423 aa12.51□□□□□ -0.41
SCG5-209ENST00000498607 HNRNPH3P31942 346 aaKnown RBP12.51□□□□□ -0.41
SCG5-209ENST00000498607 KCNJ6P48051 423 aa12.51□□□□□ -0.41
SCG5-209ENST00000498607 DSC1Q08554 894 aa12.51□□□□□ -0.41
SCG5-209ENST00000498607 TSR1Q2NL82 804 aaKnown RBP12.51□□□□□ -0.41
SCG5-209ENST00000498607 SV2CQ496J9 727 aa12.51□□□□□ -0.41
SCG5-209ENST00000498607 TMEM240Q5SV17 173 aa12.51□□□□□ -0.41
SCG5-209ENST00000498607 ZNF365Q70YC5 407 aa12.51□□□□□ -0.41
SCG5-209ENST00000498607 C16orf59Q7L2K0 433 aa12.51□□□□□ -0.41
SCG5-209ENST00000498607 SHC3Q92529 594 aa12.51□□□□□ -0.41
SCG5-209ENST00000498607 DPF3Q92784 378 aa12.51□□□□□ -0.41
SCG5-209ENST00000498607 KAT5Q92993 513 aa12.51□□□□□ -0.41
SCG5-209ENST00000498607 JAKMIP2Q96AA8 810 aa12.51□□□□□ -0.41
SCG5-209ENST00000498607 ELMO3Q96BJ8 720 aa12.51□□□□□ -0.41
SCG5-209ENST00000498607 CASD1Q96PB1 797 aa12.51□□□□□ -0.41
SCG5-209ENST00000498607 LBHD1Q9BQE6 289 aaPredicted RBP12.51□□□□□ -0.41
SCG5-209ENST00000498607 BCO2Q9BYV7 579 aa12.51□□□□□ -0.41
SCG5-209ENST00000498607 ABHD10Q9NUJ1 306 aa12.51□□□□□ -0.41
SCG5-209ENST00000498607 DNAH12Q6ZR08 3092 aa12.5□□□□□ -0.41
SCG5-209ENST00000498607 CASTOR2A6NHX0 329 aa12.5□□□□□ -0.41
SCG5-209ENST00000498607 PODXLO00592 558 aa12.5□□□□□ -0.41
SCG5-209ENST00000498607 PAX3P23760 479 aa12.5□□□□□ -0.41
SCG5-209ENST00000498607 SOX5P35711 763 aa12.5□□□□□ -0.41
SCG5-209ENST00000498607 STAT1P42224 750 aa12.5□□□□□ -0.41
SCG5-209ENST00000498607 ASPAP45381 313 aa12.5□□□□□ -0.41
SCG5-209ENST00000498607 TAF6P49848 677 aa12.5□□□□□ -0.41
SCG5-209ENST00000498607 GATMP50440 423 aa12.5□□□□□ -0.41
SCG5-209ENST00000498607 YWHAEP62258 255 aaKnown RBP12.5□□□□□ -0.41
SCG5-209ENST00000498607 TNNC1P63316 161 aa12.5□□□□□ -0.41
SCG5-209ENST00000498607 DEFB103AP81534 67 aa12.5□□□□□ -0.41
SCG5-209ENST00000498607 RNASELQ05823 741 aaKnown RBP12.5□□□□□ -0.41
SCG5-209ENST00000498607 ARHGAP44Q17R89 818 aa12.5□□□□□ -0.41
SCG5-209ENST00000498607 WDR72Q3MJ13 1102 aa12.5□□□□□ -0.41
SCG5-209ENST00000498607 SFMBT2Q5VUG0 894 aa12.5□□□□□ -0.41
SCG5-209ENST00000498607 OTOP2Q7RTS6 562 aa12.5□□□□□ -0.41
SCG5-209ENST00000498607 LRRC8AQ8IWT6 810 aa12.5□□□□□ -0.41
SCG5-209ENST00000498607 LRRC43Q8N309 656 aa12.5□□□□□ -0.41
SCG5-209ENST00000498607 CCDC112Q8NEF3 446 aa12.5□□□□□ -0.41
SCG5-209ENST00000498607 TOP1MTQ969P6 601 aa12.5□□□□□ -0.41
SCG5-209ENST00000498607 EPAS1Q99814 870 aa12.5□□□□□ -0.41
SCG5-209ENST00000498607 CYP3A43Q9HB55 503 aa12.5□□□□□ -0.41
SCG5-209ENST00000498607 ZNHIT6Q9NWK9 470 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms