RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 MSL3Q8N5Y2 521 aaKnown RBP6.65□□□□□ -1.34
TMEM39A-212ENST00000497993 CLRN3Q8NCR9 226 aa6.65□□□□□ -1.34
TMEM39A-212ENST00000497993 DEPTORQ8TB45 409 aa6.65□□□□□ -1.34
TMEM39A-212ENST00000497993 DCAF4Q8WV16 495 aa6.65□□□□□ -1.34
TMEM39A-212ENST00000497993 SLC5A5Q92911 643 aa6.65□□□□□ -1.34
TMEM39A-212ENST00000497993 PPM1MQ96MI6 270 aa6.65□□□□□ -1.34
TMEM39A-212ENST00000497993 SLF1Q9BQI6 1058 aa6.65□□□□□ -1.34
TMEM39A-212ENST00000497993 CRB3Q9BUF7 120 aa6.65□□□□□ -1.34
TMEM39A-212ENST00000497993 LGR4Q9BXB1 951 aa6.65□□□□□ -1.34
TMEM39A-212ENST00000497993 SLC38A10Q9HBR0 1119 aa6.65□□□□□ -1.34
TMEM39A-212ENST00000497993 CYP26B1Q9NR63 512 aa6.65□□□□□ -1.34
TMEM39A-212ENST00000497993 DIAPH3Q9NSV4 1193 aa6.65□□□□□ -1.34
TMEM39A-212ENST00000497993 SPTLC3Q9NUV7 552 aa6.65□□□□□ -1.34
TMEM39A-212ENST00000497993 FEM1BQ9UK73 627 aa6.65□□□□□ -1.34
TMEM39A-212ENST00000497993 PCDHA9Q9Y5H5 950 aa6.65□□□□□ -1.34
TMEM39A-212ENST00000497993 RPTORQ8N122 1335 aa6.65□□□□□ -1.35
TMEM39A-212ENST00000497993 J3KRW8 73 aa6.64□□□□□ -1.35
TMEM39A-212ENST00000497993 CYP26A1O43174 497 aa6.64□□□□□ -1.35
TMEM39A-212ENST00000497993 MSCO60682 206 aa6.64□□□□□ -1.35
TMEM39A-212ENST00000497993 PQBP1O60828 265 aaKnown RBP6.64□□□□□ -1.35
TMEM39A-212ENST00000497993 HIP1RO75146 1068 aa6.64□□□□□ -1.35
TMEM39A-212ENST00000497993 SGPL1O95470 568 aa6.64□□□□□ -1.35
TMEM39A-212ENST00000497993 CPP00450 1065 aa6.64□□□□□ -1.35
TMEM39A-212ENST00000497993 TGFB1P01137 390 aa6.64□□□□□ -1.35
TMEM39A-212ENST00000497993 CYBAP13498 195 aa6.64□□□□□ -1.35
TMEM39A-212ENST00000497993 CCL5P13501 91 aa6.64□□□□□ -1.35
TMEM39A-212ENST00000497993 FOSL1P15407 271 aa6.64□□□□□ -1.35
TMEM39A-212ENST00000497993 TNFAIP3P21580 790 aa6.64□□□□□ -1.35
TMEM39A-212ENST00000497993 STAT2P52630 851 aa6.64□□□□□ -1.35
TMEM39A-212ENST00000497993 TFAP4Q01664 338 aa6.64□□□□□ -1.35
TMEM39A-212ENST00000497993 TOMM20Q15388 145 aa6.64□□□□□ -1.35
TMEM39A-212ENST00000497993 ANKRD39Q53RE8 183 aa6.64□□□□□ -1.35
TMEM39A-212ENST00000497993 MZT2BQ6NZ67 158 aa6.64□□□□□ -1.35
TMEM39A-212ENST00000497993 CCDC149Q6ZUS6 474 aa6.64□□□□□ -1.35
TMEM39A-212ENST00000497993 MTDHQ86UE4 582 aaKnown RBP6.64□□□□□ -1.35
TMEM39A-212ENST00000497993 RASSF3Q86WH2 238 aa6.64□□□□□ -1.35
TMEM39A-212ENST00000497993 TOP6BLQ8N6T0 577 aa6.64□□□□□ -1.35
TMEM39A-212ENST00000497993 U2AF1L4Q8WU68 220 aaKnown RBP6.64□□□□□ -1.35
TMEM39A-212ENST00000497993 RUFY2Q8WXA3 655 aa6.64□□□□□ -1.35
TMEM39A-212ENST00000497993 DIO2Q92813 273 aa6.64□□□□□ -1.35
TMEM39A-212ENST00000497993 CCDC74BQ96LY2 380 aa6.64□□□□□ -1.35
TMEM39A-212ENST00000497993 TEX13BQ9BXU2 312 aa6.64□□□□□ -1.35
TMEM39A-212ENST00000497993 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.64□□□□□ -1.35
TMEM39A-212ENST00000497993 RASSF1Q9NS23 344 aa6.64□□□□□ -1.35
TMEM39A-212ENST00000497993 B4GALT6Q9UBX8 382 aa6.64□□□□□ -1.35
TMEM39A-212ENST00000497993 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.64□□□□□ -1.35
TMEM39A-212ENST00000497993 CTNNA3Q9UI47 895 aa6.64□□□□□ -1.35
TMEM39A-212ENST00000497993 OGDHLQ9ULD0 1010 aa6.64□□□□□ -1.35
TMEM39A-212ENST00000497993 NEDD4P46934 1319 aa6.64□□□□□ -1.35
TMEM39A-212ENST00000497993 WDR19Q8NEZ3 1342 aa6.64□□□□□ -1.35
TMEM39A-212ENST00000497993 TANC1Q9C0D5 1861 aa6.64□□□□□ -1.35
TMEM39A-212ENST00000497993 TRIP12Q14669 1992 aaPredicted RBP6.64□□□□□ -1.35
TMEM39A-212ENST00000497993 TSPY2A6NKD2 308 aa6.63□□□□□ -1.35
TMEM39A-212ENST00000497993 PRSS47A8MTI9 375 aa6.63□□□□□ -1.35
TMEM39A-212ENST00000497993 ZNF536O15090 1300 aa6.63□□□□□ -1.35
TMEM39A-212ENST00000497993 SNX2O60749 519 aa6.63□□□□□ -1.35
TMEM39A-212ENST00000497993 LEFTY1O75610 366 aa6.63□□□□□ -1.35
TMEM39A-212ENST00000497993 PRDM1O75626 825 aa6.63□□□□□ -1.35
TMEM39A-212ENST00000497993 SNRPB2P08579 225 aaKnown RBP6.63□□□□□ -1.35
TMEM39A-212ENST00000497993 PDHBP11177 359 aa6.63□□□□□ -1.35
TMEM39A-212ENST00000497993 TOP1P11387 765 aaKnown RBP6.63□□□□□ -1.35
TMEM39A-212ENST00000497993 ITGA4P13612 1032 aa6.63□□□□□ -1.35
TMEM39A-212ENST00000497993 ADORA2AP29274 412 aa6.63□□□□□ -1.35
TMEM39A-212ENST00000497993 MYH9P35579 1960 aaKnown RBP6.63□□□□□ -1.35
TMEM39A-212ENST00000497993 NKX3-2P78367 333 aa6.63□□□□□ -1.35
TMEM39A-212ENST00000497993 GHRHRQ02643 423 aa6.63□□□□□ -1.35
TMEM39A-212ENST00000497993 ACAP2Q15057 778 aa6.63□□□□□ -1.35
TMEM39A-212ENST00000497993 CLUL1Q15846 466 aa6.63□□□□□ -1.35
TMEM39A-212ENST00000497993 ZNF792Q3KQV3 632 aa6.63□□□□□ -1.35
TMEM39A-212ENST00000497993 PRAMEF13Q5VWM6 474 aa6.63□□□□□ -1.35
TMEM39A-212ENST00000497993 GTF2IRD2BQ6EKJ0 949 aa6.63□□□□□ -1.35
TMEM39A-212ENST00000497993 CWC27Q6UX04 472 aaKnown RBP6.63□□□□□ -1.35
TMEM39A-212ENST00000497993 MAMDC4Q6UXC1 1216 aa6.63□□□□□ -1.35
TMEM39A-212ENST00000497993 MFSD6Q6ZSS7 791 aa6.63□□□□□ -1.35
TMEM39A-212ENST00000497993 USP53Q70EK8 1073 aa6.63□□□□□ -1.35
TMEM39A-212ENST00000497993 GTF2IRD2Q86UP8 949 aa6.63□□□□□ -1.35
TMEM39A-212ENST00000497993 SLC41A1Q8IVJ1 513 aa6.63□□□□□ -1.35
TMEM39A-212ENST00000497993 ZC3H7AQ8IWR0 971 aaKnown RBP6.63□□□□□ -1.35
TMEM39A-212ENST00000497993 ARHGEF39Q8N4T4 335 aa6.63□□□□□ -1.35
TMEM39A-212ENST00000497993 IGSF22Q8N9C0 903 aa6.63□□□□□ -1.35
TMEM39A-212ENST00000497993 GIMAP8Q8ND71 665 aaPredicted RBP6.63□□□□□ -1.35
TMEM39A-212ENST00000497993 CHST13Q8NET6 341 aa6.63□□□□□ -1.35
TMEM39A-212ENST00000497993 CHURC1Q8WUH1 139 aa6.63□□□□□ -1.35
TMEM39A-212ENST00000497993 CHTF18Q8WVB6 975 aa6.63□□□□□ -1.35
TMEM39A-212ENST00000497993 ESR2Q92731 530 aa6.63□□□□□ -1.35
TMEM39A-212ENST00000497993 MAP4K1Q92918 833 aa6.63□□□□□ -1.35
TMEM39A-212ENST00000497993 RILPL2Q969X0 211 aa6.63□□□□□ -1.35
TMEM39A-212ENST00000497993 DOCK5Q9H7D0 1870 aa6.63□□□□□ -1.35
TMEM39A-212ENST00000497993 AGO4Q9HCK5 861 aaKnown RBP6.63□□□□□ -1.35
TMEM39A-212ENST00000497993 FBXO28Q9NVF7 368 aa6.63□□□□□ -1.35
TMEM39A-212ENST00000497993 CLIP2Q9UDT6 1046 aa6.63□□□□□ -1.35
TMEM39A-212ENST00000497993 FBXO40Q9UH90 709 aa6.63□□□□□ -1.35
TMEM39A-212ENST00000497993 TRAF6Q9Y4K3 522 aa6.63□□□□□ -1.35
TMEM39A-212ENST00000497993 PCDHGB3Q9Y5G1 929 aa6.63□□□□□ -1.35
TMEM39A-212ENST00000497993 LAMA3Q16787 3333 aa6.62□□□□□ -1.35
TMEM39A-212ENST00000497993 ITIH6Q6UXX5 1313 aa6.62□□□□□ -1.35
TMEM39A-212ENST00000497993 RASA4BC9J798 803 aa6.62□□□□□ -1.35
TMEM39A-212ENST00000497993 ZNF213O14771 459 aa6.62□□□□□ -1.35
TMEM39A-212ENST00000497993 RASA4O43374 803 aa6.62□□□□□ -1.35
TMEM39A-212ENST00000497993 PCDHGA12O60330 932 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms