RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 PCDHGA8Q9Y5G5 932 aa4.22□□□□□ -1.73
PSPC1-205ENST00000497722 PCDHGA7Q9Y5G6 932 aa4.22□□□□□ -1.73
PSPC1-205ENST00000497722 PCDHGA6Q9Y5G7 932 aa4.22□□□□□ -1.73
PSPC1-205ENST00000497722 PCDHGA3Q9Y5H0 932 aa4.22□□□□□ -1.73
PSPC1-205ENST00000497722 EID1Q9Y6B2 187 aa4.22□□□□□ -1.73
PSPC1-205ENST00000497722 POLR2AP24928 1970 aaKnown RBP4.22□□□□□ -1.73
PSPC1-205ENST00000497722 CCDC154A6NI56 674 aa4.21□□□□□ -1.74
PSPC1-205ENST00000497722 MGST3O14880 152 aa4.21□□□□□ -1.74
PSPC1-205ENST00000497722 AKAP10O43572 662 aa4.21□□□□□ -1.74
PSPC1-205ENST00000497722 OFD1O75665 1012 aa4.21□□□□□ -1.74
PSPC1-205ENST00000497722 C1QL1O75973 258 aa4.21□□□□□ -1.74
PSPC1-205ENST00000497722 GPANK1O95872 356 aa4.21□□□□□ -1.74
PSPC1-205ENST00000497722 DDCP20711 480 aa4.21□□□□□ -1.74
PSPC1-205ENST00000497722 CXCR5P32302 372 aa4.21□□□□□ -1.74
PSPC1-205ENST00000497722 VAV2P52735 878 aa4.21□□□□□ -1.74
PSPC1-205ENST00000497722 SIM1P81133 766 aaPredicted RBP4.21□□□□□ -1.74
PSPC1-205ENST00000497722 MXRA7P84157 204 aa4.21□□□□□ -1.74
PSPC1-205ENST00000497722 SPDYE7PQ495Y7 208 aa4.21□□□□□ -1.74
PSPC1-205ENST00000497722 FBXO42Q6P3S6 717 aa4.21□□□□□ -1.74
PSPC1-205ENST00000497722 SYCE2Q6PIF2 218 aa4.21□□□□□ -1.74
PSPC1-205ENST00000497722 Q6ZNX1 250 aa4.21□□□□□ -1.74
PSPC1-205ENST00000497722 SLC44A3Q8N4M1 653 aa4.21□□□□□ -1.74
PSPC1-205ENST00000497722 CAMKK1Q8N5S9 505 aa4.21□□□□□ -1.74
PSPC1-205ENST00000497722 NUP133Q8WUM0 1156 aa4.21□□□□□ -1.74
PSPC1-205ENST00000497722 MARS2Q96GW9 593 aaKnown RBP4.21□□□□□ -1.74
PSPC1-205ENST00000497722 PDLIM2Q96JY6 352 aa4.21□□□□□ -1.74
PSPC1-205ENST00000497722 REXO4Q9GZR2 422 aaKnown RBP4.21□□□□□ -1.74
PSPC1-205ENST00000497722 GSTO2Q9H4Y5 243 aa4.21□□□□□ -1.74
PSPC1-205ENST00000497722 MAN1C1Q9NR34 630 aa4.21□□□□□ -1.74
PSPC1-205ENST00000497722 INSL6Q9Y581 213 aa4.21□□□□□ -1.74
PSPC1-205ENST00000497722 PCDHA13Q9Y5I0 950 aa4.21□□□□□ -1.74
PSPC1-205ENST00000497722 NOX1Q9Y5S8 564 aa4.21□□□□□ -1.74
PSPC1-205ENST00000497722 MYBBP1AQ9BQG0 1328 aaKnown RBP4.21□□□□□ -1.74
PSPC1-205ENST00000497722 TCRBV7S2A1N4TA0A589 114 aa4.2□□□□□ -1.74
PSPC1-205ENST00000497722 GOLGA6CA6NDK9 693 aa4.2□□□□□ -1.74
PSPC1-205ENST00000497722 GOLGA6BA6NDN3 693 aa4.2□□□□□ -1.74
PSPC1-205ENST00000497722 FZD9O00144 591 aa4.2□□□□□ -1.74
PSPC1-205ENST00000497722 ERN1O75460 977 aaKnown RBP4.2□□□□□ -1.74
PSPC1-205ENST00000497722 GOLGA6DP0CG33 693 aa4.2□□□□□ -1.74
PSPC1-205ENST00000497722 HSPA6P17066 643 aa4.2□□□□□ -1.74
PSPC1-205ENST00000497722 CYP2C19P33261 490 aa4.2□□□□□ -1.74
PSPC1-205ENST00000497722 RARRES1P49788 294 aa4.2□□□□□ -1.74
PSPC1-205ENST00000497722 CTXN1P60606 82 aa4.2□□□□□ -1.74
PSPC1-205ENST00000497722 TARDBPQ13148 414 aaKnown RBP eCLIP4.2□□□□□ -1.74
PSPC1-205ENST00000497722 TMEM240Q5SV17 173 aa4.2□□□□□ -1.74
PSPC1-205ENST00000497722 ZKSCAN2Q63HK3 967 aa4.2□□□□□ -1.74
PSPC1-205ENST00000497722 KIAA0895LQ68EN5 471 aa4.2□□□□□ -1.74
PSPC1-205ENST00000497722 RD3Q7Z3Z2 195 aa4.2□□□□□ -1.74
PSPC1-205ENST00000497722 FMNL3Q8IVF7 1028 aa4.2□□□□□ -1.74
PSPC1-205ENST00000497722 GRAMD1CQ8IYS0 662 aa4.2□□□□□ -1.74
PSPC1-205ENST00000497722 RNF31Q96EP0 1072 aa4.2□□□□□ -1.74
PSPC1-205ENST00000497722 TMX3Q96JJ7 454 aa4.2□□□□□ -1.74
PSPC1-205ENST00000497722 MAP3K14Q99558 947 aa4.2□□□□□ -1.74
PSPC1-205ENST00000497722 LRFN3Q9BTN0 628 aa4.2□□□□□ -1.74
PSPC1-205ENST00000497722 GOLGA6AQ9NYA3 693 aa4.2□□□□□ -1.74
PSPC1-205ENST00000497722 RUVBL1Q9Y265 456 aaKnown RBP4.2□□□□□ -1.74
PSPC1-205ENST00000497722 MASP2O00187 686 aa4.19□□□□□ -1.74
PSPC1-205ENST00000497722 SCGB1D2O95969 90 aa4.19□□□□□ -1.74
PSPC1-205ENST00000497722 FCER1AP12319 257 aa4.19□□□□□ -1.74
PSPC1-205ENST00000497722 ALAS1P13196 640 aa4.19□□□□□ -1.74
PSPC1-205ENST00000497722 ATF3P18847 181 aa4.19□□□□□ -1.74
PSPC1-205ENST00000497722 EDNRBP24530 442 aa4.19□□□□□ -1.74
PSPC1-205ENST00000497722 SMARCA1P28370 1054 aa4.19□□□□□ -1.74
PSPC1-205ENST00000497722 KRTAP10-7P60409 375 aaPredicted RBP4.19□□□□□ -1.74
PSPC1-205ENST00000497722 NHLH1Q02575 133 aa4.19□□□□□ -1.74
PSPC1-205ENST00000497722 THEMIS2Q5TEJ8 643 aa4.19□□□□□ -1.74
PSPC1-205ENST00000497722 SP5Q6BEB4 398 aaPredicted RBP4.19□□□□□ -1.74
PSPC1-205ENST00000497722 CATIPQ7Z7H3 387 aa4.19□□□□□ -1.74
PSPC1-205ENST00000497722 TTC7BQ86TV6 843 aa4.19□□□□□ -1.74
PSPC1-205ENST00000497722 MYO1HQ8N1T3 1032 aa4.19□□□□□ -1.74
PSPC1-205ENST00000497722 FITM2Q8N6M3 262 aa4.19□□□□□ -1.74
PSPC1-205ENST00000497722 IFI44Q8TCB0 444 aa4.19□□□□□ -1.74
PSPC1-205ENST00000497722 KAT5Q92993 513 aa4.19□□□□□ -1.74
PSPC1-205ENST00000497722 RAB24Q969Q5 203 aa4.19□□□□□ -1.74
PSPC1-205ENST00000497722 COA7Q96BR5 231 aa4.19□□□□□ -1.74
PSPC1-205ENST00000497722 MED15Q96RN5 788 aa4.19□□□□□ -1.74
PSPC1-205ENST00000497722 DMRTA2Q96SC8 542 aa4.19□□□□□ -1.74
PSPC1-205ENST00000497722 PNKPQ96T60 521 aa4.19□□□□□ -1.74
PSPC1-205ENST00000497722 NUP88Q99567 741 aaPredicted RBP4.19□□□□□ -1.74
PSPC1-205ENST00000497722 NMRK2Q9NPI5 230 aa4.19□□□□□ -1.74
PSPC1-205ENST00000497722 KMT5AQ9NQR1 393 aa4.19□□□□□ -1.74
PSPC1-205ENST00000497722 TBCCD1Q9NVR7 557 aa4.19□□□□□ -1.74
PSPC1-205ENST00000497722 PNMA8BQ9ULN7 279 aaPredicted RBP4.19□□□□□ -1.74
PSPC1-205ENST00000497722 THRAP3Q9Y2W1 955 aaKnown RBP4.19□□□□□ -1.74
PSPC1-205ENST00000497722 IPPQ9Y573 584 aa4.19□□□□□ -1.74
PSPC1-205ENST00000497722 A0A1W2PS29 197 aa4.18□□□□□ -1.74
PSPC1-205ENST00000497722 CDHR4A6H8M9 788 aa4.18□□□□□ -1.74
PSPC1-205ENST00000497722 HTRA2O43464 458 aaPredicted RBP4.18□□□□□ -1.74
PSPC1-205ENST00000497722 AP1G1O43747 822 aa4.18□□□□□ -1.74
PSPC1-205ENST00000497722 SBK3P0C264 359 aa4.18□□□□□ -1.74
PSPC1-205ENST00000497722 ZNF37AP17032 561 aaPredicted RBP4.18□□□□□ -1.74
PSPC1-205ENST00000497722 PDCP20941 246 aa4.18□□□□□ -1.74
PSPC1-205ENST00000497722 AKAP5P24588 427 aa4.18□□□□□ -1.74
PSPC1-205ENST00000497722 IL10RAQ13651 578 aa4.18□□□□□ -1.74
PSPC1-205ENST00000497722 GEN1Q17RS7 908 aa4.18□□□□□ -1.74
PSPC1-205ENST00000497722 PGS1Q32NB8 556 aa4.18□□□□□ -1.74
PSPC1-205ENST00000497722 MINDY4Q4G0A6 757 aa4.18□□□□□ -1.74
PSPC1-205ENST00000497722 ARHGAP29Q52LW3 1261 aa4.18□□□□□ -1.74
PSPC1-205ENST00000497722 HSP90AB2PQ58FF8 381 aa4.18□□□□□ -1.74
PSPC1-205ENST00000497722 KRTAP5-11Q6L8G4 156 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 152.2 ms