RNA–Protein interactions for RNA: ENST00000497289.5

RPN1-207, Transcript of ribophorin I, humanhuman

TSL 2 BASIC

Gene RPN1, Length 2,137 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-207ENST00000497289 ZNF446Q9NWS9 450 aa16.87■□□□□ 0.29
RPN1-207ENST00000497289 ITGA11Q9UKX5 1188 aa16.87■□□□□ 0.29
RPN1-207ENST00000497289 MYADML2A6NDP7 307 aa16.87■□□□□ 0.29
RPN1-207ENST00000497289 MIF4GDA9UHW6 222 aaKnown RBP16.87■□□□□ 0.29
RPN1-207ENST00000497289 HOXA11P31270 313 aaPredicted RBP16.87■□□□□ 0.29
RPN1-207ENST00000497289 VSNL1P62760 191 aa16.87■□□□□ 0.29
RPN1-207ENST00000497289 NOMO3P69849 1222 aa16.87■□□□□ 0.29
RPN1-207ENST00000497289 ZNF200P98182 395 aaPredicted RBP16.87■□□□□ 0.29
RPN1-207ENST00000497289 PRKCZQ05513 592 aa16.87■□□□□ 0.29
RPN1-207ENST00000497289 REM2Q8IYK8 340 aaPredicted RBP16.87■□□□□ 0.29
RPN1-207ENST00000497289 USP38Q8NB14 1042 aa16.87■□□□□ 0.29
RPN1-207ENST00000497289 HNRNPLLQ8WVV9 542 aaKnown RBP16.87■□□□□ 0.29
RPN1-207ENST00000497289 CPA5Q8WXQ8 436 aa16.87■□□□□ 0.29
RPN1-207ENST00000497289 CYFIP2Q96F07 1278 aa16.87■□□□□ 0.29
RPN1-207ENST00000497289 BCO2Q9BYV7 579 aa16.87■□□□□ 0.29
RPN1-207ENST00000497289 RBM12Q9NTZ6 932 aaKnown RBP16.87■□□□□ 0.29
RPN1-207ENST00000497289 NXF1Q9UBU9 619 aaKnown RBP16.87■□□□□ 0.29
RPN1-207ENST00000497289 POLIQ9UNA4 740 aa16.87■□□□□ 0.29
RPN1-207ENST00000497289 ALG6Q9Y672 507 aa16.87■□□□□ 0.29
RPN1-207ENST00000497289 PGRMC1O00264 195 aaKnown RBP16.86■□□□□ 0.29
RPN1-207ENST00000497289 DDX3YO15523 660 aaKnown RBP16.86■□□□□ 0.29
RPN1-207ENST00000497289 MESDQ14696 234 aa16.86■□□□□ 0.29
RPN1-207ENST00000497289 SNX17Q15036 470 aa16.86■□□□□ 0.29
RPN1-207ENST00000497289 GNASQ5JWF2 1037 aa16.86■□□□□ 0.29
RPN1-207ENST00000497289 RASGEF1CQ8N431 466 aa16.86■□□□□ 0.29
RPN1-207ENST00000497289 ZNF606Q8WXB4 792 aa16.86■□□□□ 0.29
RPN1-207ENST00000497289 RUBCNQ92622 972 aa16.86■□□□□ 0.29
RPN1-207ENST00000497289 RPS6KC1Q96S38 1066 aa16.86■□□□□ 0.29
RPN1-207ENST00000497289 VRTNQ9H8Y1 702 aa16.86■□□□□ 0.29
RPN1-207ENST00000497289 PLEKHA5Q9HAU0 1116 aa16.86■□□□□ 0.29
RPN1-207ENST00000497289 DERAQ9Y315 318 aa16.86■□□□□ 0.29
RPN1-207ENST00000497289 TMEM110-MUSTN1A8MSY1 372 aa16.85■□□□□ 0.29
RPN1-207ENST00000497289 ZRANB2O95218 330 aaKnown RBP eCLIP16.85■□□□□ 0.29
RPN1-207ENST00000497289 WEE2P0C1S8 567 aa16.85■□□□□ 0.29
RPN1-207ENST00000497289 P4HA1P13674 534 aa16.85■□□□□ 0.29
RPN1-207ENST00000497289 YARSP54577 528 aaKnown RBP16.85■□□□□ 0.29
RPN1-207ENST00000497289 WDR72Q3MJ13 1102 aa16.85■□□□□ 0.29
RPN1-207ENST00000497289 LIN9Q5TKA1 542 aa16.85■□□□□ 0.29
RPN1-207ENST00000497289 C8orf74Q6P047 294 aa16.85■□□□□ 0.29
RPN1-207ENST00000497289 MON1BQ7L1V2 547 aa16.85■□□□□ 0.29
RPN1-207ENST00000497289 PASD1Q8IV76 773 aa16.85■□□□□ 0.29
RPN1-207ENST00000497289 CXorf38Q8TB03 319 aa16.85■□□□□ 0.29
RPN1-207ENST00000497289 KIF12Q96FN5 646 aa16.85■□□□□ 0.29
RPN1-207ENST00000497289 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.85■□□□□ 0.293e-7■■□□□ 14.3
RPN1-207ENST00000497289 DPP3Q9NY33 737 aa16.85■□□□□ 0.29
RPN1-207ENST00000497289 CHORDC1Q9UHD1 332 aaPredicted RBP16.85■□□□□ 0.29
RPN1-207ENST00000497289 SEPT4O43236 478 aa16.85■□□□□ 0.29
RPN1-207ENST00000497289 AOC2O75106 756 aa16.85■□□□□ 0.29
RPN1-207ENST00000497289 SEC31AO94979 1220 aaKnown RBP16.85■□□□□ 0.29
RPN1-207ENST00000497289 RARBP10826 455 aa16.85■□□□□ 0.29
RPN1-207ENST00000497289 POLR2BP30876 1174 aaKnown RBP16.85■□□□□ 0.29
RPN1-207ENST00000497289 CRYBB1P53674 252 aaPredicted RBP16.85■□□□□ 0.29
RPN1-207ENST00000497289 TNNC1P63316 161 aa16.85■□□□□ 0.29
RPN1-207ENST00000497289 GLE1Q53GS7 698 aaKnown RBP16.85■□□□□ 0.29
RPN1-207ENST00000497289 TAF2Q6P1X5 1199 aa16.85■□□□□ 0.29
RPN1-207ENST00000497289 PHF13Q86YI8 300 aaPredicted RBP16.85■□□□□ 0.29
RPN1-207ENST00000497289 UBL4BQ8N7F7 174 aa16.85■□□□□ 0.29
RPN1-207ENST00000497289 VCPIP1Q96JH7 1222 aa16.85■□□□□ 0.29
RPN1-207ENST00000497289 TRIM6Q9C030 488 aaPredicted RBP16.85■□□□□ 0.29
RPN1-207ENST00000497289 CARD9Q9H257 536 aa16.85■□□□□ 0.29
RPN1-207ENST00000497289 SNTG2Q9NY99 539 aa16.85■□□□□ 0.29
RPN1-207ENST00000497289 NOC2LQ9Y3T9 749 aaKnown RBP16.85■□□□□ 0.29
RPN1-207ENST00000497289 ATP8B1O43520 1251 aa16.84■□□□□ 0.29
RPN1-207ENST00000497289 LSM8O95777 96 aaKnown RBP16.84■□□□□ 0.29
RPN1-207ENST00000497289 CFHP08603 1231 aa16.84■□□□□ 0.29
RPN1-207ENST00000497289 RNASE9P60153 205 aaKnown RBP16.84■□□□□ 0.29
RPN1-207ENST00000497289 RBP5P82980 135 aa16.84■□□□□ 0.29
RPN1-207ENST00000497289 SNX27Q96L92 541 aa16.84■□□□□ 0.29
RPN1-207ENST00000497289 LRRC1Q9BTT6 524 aa16.84■□□□□ 0.29
RPN1-207ENST00000497289 EIF2AQ9BY44 585 aaKnown RBP16.84■□□□□ 0.29
RPN1-207ENST00000497289 WNT8AQ9H1J5 351 aa16.84■□□□□ 0.29
RPN1-207ENST00000497289 AGAP1Q9UPQ3 857 aa16.84■□□□□ 0.29
RPN1-207ENST00000497289 PIN4Q9Y237 131 aaKnown RBP16.84■□□□□ 0.29
RPN1-207ENST00000497289 TOMM70O94826 608 aa16.84■□□□□ 0.29
RPN1-207ENST00000497289 STAU1O95793 577 aaKnown RBP16.84■□□□□ 0.29
RPN1-207ENST00000497289 COMTP21964 271 aa16.84■□□□□ 0.29
RPN1-207ENST00000497289 RRM1P23921 792 aa16.84■□□□□ 0.29
RPN1-207ENST00000497289 BRD2P25440 801 aaKnown RBP16.84■□□□□ 0.29
RPN1-207ENST00000497289 RAP1GAPP47736 663 aa16.84■□□□□ 0.29
RPN1-207ENST00000497289 NKX3-2P78367 333 aa16.84■□□□□ 0.29
RPN1-207ENST00000497289 SP3Q02447 781 aa16.84■□□□□ 0.29
RPN1-207ENST00000497289 ZNF394Q53GI3 561 aa16.84■□□□□ 0.29
RPN1-207ENST00000497289 TMEM40Q8WWA1 233 aa16.84■□□□□ 0.29
RPN1-207ENST00000497289 HPDLQ96IR7 371 aa16.84■□□□□ 0.29
RPN1-207ENST00000497289 C11orf70Q9BRQ4 267 aa16.84■□□□□ 0.29
RPN1-207ENST00000497289 CYP3A43Q9HB55 503 aa16.84■□□□□ 0.29
RPN1-207ENST00000497289 ADAM22Q9P0K1 906 aa16.84■□□□□ 0.29
RPN1-207ENST00000497289 TMEM59LQ9UK28 342 aa16.84■□□□□ 0.29
RPN1-207ENST00000497289 PGK1P00558 417 aa16.83■□□□□ 0.28
RPN1-207ENST00000497289 SSTR3P32745 418 aaPredicted RBP16.83■□□□□ 0.28
RPN1-207ENST00000497289 C1QBPQ07021 282 aaKnown RBP16.83■□□□□ 0.28
RPN1-207ENST00000497289 CACNB2Q08289 660 aaPredicted RBP16.83■□□□□ 0.28
RPN1-207ENST00000497289 CLUL1Q15846 466 aa16.83■□□□□ 0.28
RPN1-207ENST00000497289 DEFB115Q30KQ5 88 aa16.83■□□□□ 0.28
RPN1-207ENST00000497289 CAPNS2Q96L46 248 aa16.83■□□□□ 0.28
RPN1-207ENST00000497289 ZSWIM1Q9BR11 485 aa16.83■□□□□ 0.28
RPN1-207ENST00000497289 GTF2IRD1Q9UHL9 959 aa16.83■□□□□ 0.28
RPN1-207ENST00000497289 ANAPC7Q9UJX3 599 aa16.83■□□□□ 0.28
RPN1-207ENST00000497289 TTC7AQ9ULT0 858 aaPredicted RBP16.83■□□□□ 0.28
RPN1-207ENST00000497289 PCDHGC3Q9UN70 934 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms