RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 DHDDSQ86SQ9 333 aa13.71□□□□□ -0.21
VEGFA-215ENST00000497139 ZNF384Q8TF68 577 aa13.71□□□□□ -0.21
VEGFA-215ENST00000497139 GAB3Q8WWW8 586 aa13.71□□□□□ -0.21
VEGFA-215ENST00000497139 PANX3Q96QZ0 392 aa13.71□□□□□ -0.21
VEGFA-215ENST00000497139 KLHL4Q9C0H6 718 aa13.71□□□□□ -0.21
VEGFA-215ENST00000497139 RMI1Q9H9A7 625 aa13.71□□□□□ -0.21
VEGFA-215ENST00000497139 CLIC5Q9NZA1 410 aa13.71□□□□□ -0.21
VEGFA-215ENST00000497139 DCTN4Q9UJW0 460 aa13.71□□□□□ -0.21
VEGFA-215ENST00000497139 LAMB2P55268 1798 aa13.71□□□□□ -0.21
VEGFA-215ENST00000497139 A0A0G2JND7 137 aa13.71□□□□□ -0.21
VEGFA-215ENST00000497139 EML1O00423 815 aa13.71□□□□□ -0.21
VEGFA-215ENST00000497139 EDIL3O43854 480 aa13.71□□□□□ -0.21
VEGFA-215ENST00000497139 ZNF862O60290 1169 aa13.71□□□□□ -0.21
VEGFA-215ENST00000497139 ZNF189O75820 626 aaPredicted RBP13.71□□□□□ -0.21
VEGFA-215ENST00000497139 CYP1A2P05177 515 aa13.71□□□□□ -0.21
VEGFA-215ENST00000497139 TSPY3P0CV98 308 aa13.71□□□□□ -0.21
VEGFA-215ENST00000497139 TSPY8P0CW00 308 aa13.71□□□□□ -0.21
VEGFA-215ENST00000497139 CYP2D6P10635 497 aa13.71□□□□□ -0.21
VEGFA-215ENST00000497139 SLC1A1P43005 524 aa13.71□□□□□ -0.21
VEGFA-215ENST00000497139 CASP5P51878 434 aa13.71□□□□□ -0.21
VEGFA-215ENST00000497139 PLCB3Q01970 1234 aa13.71□□□□□ -0.21
VEGFA-215ENST00000497139 SEPT7Q16181 437 aaKnown RBP13.71□□□□□ -0.21
VEGFA-215ENST00000497139 ARSHQ5FYA8 562 aa13.71□□□□□ -0.21
VEGFA-215ENST00000497139 CHSY1Q86X52 802 aa13.71□□□□□ -0.21
VEGFA-215ENST00000497139 FAM186BQ8IYM0 893 aa13.71□□□□□ -0.21
VEGFA-215ENST00000497139 C1orf54Q8WWF1 131 aa13.71□□□□□ -0.21
VEGFA-215ENST00000497139 HAS1Q92839 578 aa13.71□□□□□ -0.21
VEGFA-215ENST00000497139 OXNAD1Q96HP4 312 aaPredicted RBP13.71□□□□□ -0.21
VEGFA-215ENST00000497139 RBM15Q96T37 977 aaKnown RBP eCLIP13.71□□□□□ -0.212e-9■■■□□ 16.9
VEGFA-215ENST00000497139 TSSK1BQ9BXA7 367 aa13.71□□□□□ -0.21
VEGFA-215ENST00000497139 TMEM120AQ9BXJ8 343 aa13.71□□□□□ -0.21
VEGFA-215ENST00000497139 INTS2Q9H0H0 1204 aaKnown RBP13.71□□□□□ -0.21
VEGFA-215ENST00000497139 MANSC1Q9H8J5 431 aa13.71□□□□□ -0.21
VEGFA-215ENST00000497139 TMEM260Q9NX78 707 aa13.71□□□□□ -0.21
VEGFA-215ENST00000497139 PLA2G4CQ9UP65 541 aa13.71□□□□□ -0.21
VEGFA-215ENST00000497139 STK24Q9Y6E0 443 aa13.71□□□□□ -0.21
VEGFA-215ENST00000497139 CLDN3O15551 220 aa13.7□□□□□ -0.22
VEGFA-215ENST00000497139 EMP3P54852 163 aa13.7□□□□□ -0.22
VEGFA-215ENST00000497139 CHRNDQ07001 517 aa13.7□□□□□ -0.22
VEGFA-215ENST00000497139 CDK18Q07002 472 aa13.7□□□□□ -0.22
VEGFA-215ENST00000497139 UBE4AQ14139 1066 aa13.7□□□□□ -0.22
VEGFA-215ENST00000497139 CLEC16AQ2KHT3 1053 aa13.7□□□□□ -0.22
VEGFA-215ENST00000497139 SYDE2Q5VT97 1194 aa13.7□□□□□ -0.22
VEGFA-215ENST00000497139 PALB2Q86YC2 1186 aa13.7□□□□□ -0.22
VEGFA-215ENST00000497139 ZNF34Q8IZ26 560 aa13.7□□□□□ -0.22
VEGFA-215ENST00000497139 ZNF276Q8N554 614 aa13.7□□□□□ -0.22
VEGFA-215ENST00000497139 C9orf72Q96LT7 481 aa13.7□□□□□ -0.22
VEGFA-215ENST00000497139 USP29Q9HBJ7 922 aa13.7□□□□□ -0.22
VEGFA-215ENST00000497139 ARHGEF4Q9NR80 690 aa13.7□□□□□ -0.22
VEGFA-215ENST00000497139 LRRC4BQ9NT99 713 aa13.7□□□□□ -0.22
VEGFA-215ENST00000497139 DNAJC17Q9NVM6 304 aaKnown RBP13.7□□□□□ -0.22
VEGFA-215ENST00000497139 FAIMQ9NVQ4 179 aa13.7□□□□□ -0.22
VEGFA-215ENST00000497139 NR2E3Q9Y5X4 410 aa13.7□□□□□ -0.22
VEGFA-215ENST00000497139 NFASCO94856 1347 aa13.7□□□□□ -0.22
VEGFA-215ENST00000497139 NPHP3-ACAD11A0A0J9YXS1 232 aa13.7□□□□□ -0.22
VEGFA-215ENST00000497139 RBM47A0AV96 593 aaKnown RBP13.7□□□□□ -0.22
VEGFA-215ENST00000497139 EIF3DO15371 548 aaKnown RBP eCLIP13.7□□□□□ -0.22
VEGFA-215ENST00000497139 CAMTA2O94983 1202 aa13.7□□□□□ -0.22
VEGFA-215ENST00000497139 FGFR1P11362 822 aa13.7□□□□□ -0.22
VEGFA-215ENST00000497139 VCLP18206 1134 aa13.7□□□□□ -0.22
VEGFA-215ENST00000497139 EVX2Q03828 476 aa13.7□□□□□ -0.22
VEGFA-215ENST00000497139 PDK3Q15120 406 aa13.7□□□□□ -0.22
VEGFA-215ENST00000497139 KBTBD12Q3ZCT8 623 aa13.7□□□□□ -0.22
VEGFA-215ENST00000497139 CAVIN4Q5BKX8 364 aa13.7□□□□□ -0.22
VEGFA-215ENST00000497139 IZUMO3Q5VZ72 239 aa13.7□□□□□ -0.22
VEGFA-215ENST00000497139 DUS1LQ6P1R4 473 aaKnown RBP13.7□□□□□ -0.22
VEGFA-215ENST00000497139 UGT2A3Q6UWM9 527 aa13.7□□□□□ -0.22
VEGFA-215ENST00000497139 ULK2Q8IYT8 1036 aa13.7□□□□□ -0.22
VEGFA-215ENST00000497139 ZNF564Q8TBZ8 553 aaPredicted RBP13.7□□□□□ -0.22
VEGFA-215ENST00000497139 FNDC8Q8TC99 324 aa13.7□□□□□ -0.22
VEGFA-215ENST00000497139 JADE3Q92613 823 aa13.7□□□□□ -0.22
VEGFA-215ENST00000497139 TEKT1Q969V4 418 aa13.7□□□□□ -0.22
VEGFA-215ENST00000497139 MAF1Q9H063 256 aa13.7□□□□□ -0.22
VEGFA-215ENST00000497139 KCNK13Q9HB14 408 aa13.7□□□□□ -0.22
VEGFA-215ENST00000497139 TMOD3Q9NYL9 352 aa13.7□□□□□ -0.22
VEGFA-215ENST00000497139 B2RBV5 119 aa13.7□□□□□ -0.22
VEGFA-215ENST00000497139 PIK3CDO00329 1044 aa13.7□□□□□ -0.22
VEGFA-215ENST00000497139 FCHO1O14526 889 aa13.7□□□□□ -0.22
VEGFA-215ENST00000497139 MARCH6O60337 910 aa13.7□□□□□ -0.22
VEGFA-215ENST00000497139 DLDP09622 509 aaKnown RBP13.7□□□□□ -0.22
VEGFA-215ENST00000497139 PORP16435 677 aaPredicted RBP13.7□□□□□ -0.22
VEGFA-215ENST00000497139 RRM1P23921 792 aa13.7□□□□□ -0.22
VEGFA-215ENST00000497139 IL6STP40189 918 aaPredicted RBP13.7□□□□□ -0.22
VEGFA-215ENST00000497139 GJA8P48165 433 aa13.7□□□□□ -0.22
VEGFA-215ENST00000497139 PLOD1Q02809 727 aaPredicted RBP13.7□□□□□ -0.22
VEGFA-215ENST00000497139 TBL3Q12788 808 aaKnown RBP13.7□□□□□ -0.22
VEGFA-215ENST00000497139 CCDC142Q17RM4 750 aa13.7□□□□□ -0.22
VEGFA-215ENST00000497139 SFR1Q86XK3 245 aa13.7□□□□□ -0.22
VEGFA-215ENST00000497139 C4orf33Q8N1A6 199 aa13.7□□□□□ -0.22
VEGFA-215ENST00000497139 CEP95Q96GE4 821 aa13.7□□□□□ -0.22
VEGFA-215ENST00000497139 YIPF2Q9BWQ6 316 aa13.7□□□□□ -0.22
VEGFA-215ENST00000497139 MRPS26Q9BYN8 205 aaKnown RBP13.7□□□□□ -0.22
VEGFA-215ENST00000497139 RBM38Q9H0Z9 239 aaKnown RBP13.7□□□□□ -0.22
VEGFA-215ENST00000497139 S100A14Q9HCY8 104 aa13.7□□□□□ -0.22
VEGFA-215ENST00000497139 PPP1R1BQ9UD71 204 aaPredicted RBP13.7□□□□□ -0.22
VEGFA-215ENST00000497139 GTF3C4Q9UKN8 822 aa13.7□□□□□ -0.22
VEGFA-215ENST00000497139 TELO2Q9Y4R8 837 aa13.7□□□□□ -0.22
VEGFA-215ENST00000497139 TNRC6CQ9HCJ0 1690 aaKnown RBP13.69□□□□□ -0.22
VEGFA-215ENST00000497139 CAPN14A8MX76 684 aa13.69□□□□□ -0.22
VEGFA-215ENST00000497139 BAG2O95816 211 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms