RNA–Protein interactions for RNA: ENST00000497026.5

CSMD3-208, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 1,406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-208ENST00000497026 TANGO6Q9C0B7 1094 aa5.65□□□□□ -1.5
CSMD3-208ENST00000497026 CDIP1Q9H305 208 aa5.65□□□□□ -1.5
CSMD3-208ENST00000497026 EPB41L1Q9H4G0 881 aa5.65□□□□□ -1.5
CSMD3-208ENST00000497026 SH2D4AQ9H788 454 aa5.65□□□□□ -1.5
CSMD3-208ENST00000497026 ZNF287Q9HBT7 754 aa5.65□□□□□ -1.5
CSMD3-208ENST00000497026 IGSF5Q9NSI5 407 aa5.65□□□□□ -1.5
CSMD3-208ENST00000497026 TMEM51Q9NW97 253 aa5.65□□□□□ -1.5
CSMD3-208ENST00000497026 MYOTQ9UBF9 498 aa5.65□□□□□ -1.5
CSMD3-208ENST00000497026 CLIP2Q9UDT6 1046 aa5.65□□□□□ -1.5
CSMD3-208ENST00000497026 NOL7Q9UMY1 257 aaKnown RBP5.65□□□□□ -1.5
CSMD3-208ENST00000497026 ADAMTS5Q9UNA0 930 aa5.65□□□□□ -1.5
CSMD3-208ENST00000497026 ZKSCAN5Q9Y2L8 839 aa5.65□□□□□ -1.5
CSMD3-208ENST00000497026 KIF3AQ9Y496 699 aa5.65□□□□□ -1.5
CSMD3-208ENST00000497026 ZNFX1Q9P2E3 1918 aaKnown RBP5.65□□□□□ -1.5
CSMD3-208ENST00000497026 MKI67P46013 3256 aaKnown RBP5.65□□□□□ -1.5
CSMD3-208ENST00000497026 PLXNA1Q9UIW2 1896 aa5.65□□□□□ -1.5
CSMD3-208ENST00000497026 LCTP09848 1927 aa5.65□□□□□ -1.51
CSMD3-208ENST00000497026 TSPY2A6NKD2 308 aa5.65□□□□□ -1.51
CSMD3-208ENST00000497026 F5H6K3 240 aa5.65□□□□□ -1.51
CSMD3-208ENST00000497026 SLC27A2O14975 620 aa5.65□□□□□ -1.51
CSMD3-208ENST00000497026 FLOT1O75955 427 aa5.65□□□□□ -1.51
CSMD3-208ENST00000497026 TTLL1O95922 423 aa5.65□□□□□ -1.51
CSMD3-208ENST00000497026 SLC3A2P08195 630 aaKnown RBP5.65□□□□□ -1.51
CSMD3-208ENST00000497026 PABPC1P11940 636 aaKnown RBP5.65□□□□□ -1.51
CSMD3-208ENST00000497026 HOXD10P28358 340 aa5.65□□□□□ -1.51
CSMD3-208ENST00000497026 PTH1RQ03431 593 aa5.65□□□□□ -1.51
CSMD3-208ENST00000497026 GABPB1Q06547 395 aaPredicted RBP5.65□□□□□ -1.51
CSMD3-208ENST00000497026 KLRC3Q07444 240 aa5.65□□□□□ -1.51
CSMD3-208ENST00000497026 RAB33AQ14088 237 aa5.65□□□□□ -1.51
CSMD3-208ENST00000497026 TMEM132BQ14DG7 1078 aa5.65□□□□□ -1.51
CSMD3-208ENST00000497026 AKNAD1Q5T1N1 836 aa5.65□□□□□ -1.51
CSMD3-208ENST00000497026 ZFYVE27Q5T4F4 411 aa5.65□□□□□ -1.51
CSMD3-208ENST00000497026 TEPPQ6URK8 271 aa5.65□□□□□ -1.51
CSMD3-208ENST00000497026 ZNF771Q7L3S4 317 aaPredicted RBP5.65□□□□□ -1.51
CSMD3-208ENST00000497026 GMCL1P1Q8NEA9 526 aa5.65□□□□□ -1.51
CSMD3-208ENST00000497026 MYRIPQ8NFW9 859 aa5.65□□□□□ -1.51
CSMD3-208ENST00000497026 RAET1EQ8TD07 263 aa5.65□□□□□ -1.51
CSMD3-208ENST00000497026 STAG1Q8WVM7 1258 aa5.65□□□□□ -1.51
CSMD3-208ENST00000497026 TRIB2Q92519 343 aa5.65□□□□□ -1.51
CSMD3-208ENST00000497026 USP6NLQ92738 828 aa5.65□□□□□ -1.51
CSMD3-208ENST00000497026 COA7Q96BR5 231 aa5.65□□□□□ -1.51
CSMD3-208ENST00000497026 MOV10L1Q9BXT6 1211 aaKnown RBP5.65□□□□□ -1.51
CSMD3-208ENST00000497026 DTLQ9NZJ0 730 aa5.65□□□□□ -1.51
CSMD3-208ENST00000497026 CROTQ9UKG9 612 aa5.65□□□□□ -1.51
CSMD3-208ENST00000497026 SYNPO2Q9UMS6 1093 aa5.65□□□□□ -1.51
CSMD3-208ENST00000497026 WASF3Q9UPY6 502 aa5.65□□□□□ -1.51
CSMD3-208ENST00000497026 SMCHD1A6NHR9 2005 aa5.64□□□□□ -1.51
CSMD3-208ENST00000497026 VWA5AO00534 786 aa5.64□□□□□ -1.51
CSMD3-208ENST00000497026 ADCY3O60266 1144 aa5.64□□□□□ -1.51
CSMD3-208ENST00000497026 RANBP6O60518 1105 aaKnown RBP5.64□□□□□ -1.51
CSMD3-208ENST00000497026 LRG1P02750 347 aa5.64□□□□□ -1.51
CSMD3-208ENST00000497026 CYP21A2P08686 494 aa5.64□□□□□ -1.51
CSMD3-208ENST00000497026 CYP2B6P20813 491 aa5.64□□□□□ -1.51
CSMD3-208ENST00000497026 MAPK4P31152 587 aa5.64□□□□□ -1.51
CSMD3-208ENST00000497026 GRB14Q14449 540 aa5.64□□□□□ -1.51
CSMD3-208ENST00000497026 NAALADL2Q58DX5 795 aa5.64□□□□□ -1.51
CSMD3-208ENST00000497026 EMC4Q5J8M3 183 aa5.64□□□□□ -1.51
CSMD3-208ENST00000497026 RRP12Q5JTH9 1297 aaKnown RBP5.64□□□□□ -1.51
CSMD3-208ENST00000497026 NSMFQ6X4W1 530 aa5.64□□□□□ -1.51
CSMD3-208ENST00000497026 PLEKHH3Q7Z736 793 aa5.64□□□□□ -1.51
CSMD3-208ENST00000497026 CREBRFQ8IUR6 639 aa5.64□□□□□ -1.51
CSMD3-208ENST00000497026 TXNDC5Q8NBS9 432 aaKnown RBP5.64□□□□□ -1.51
CSMD3-208ENST00000497026 SOCS4Q8WXH5 440 aa5.64□□□□□ -1.51
CSMD3-208ENST00000497026 SPATC1LQ9H0A9 340 aa5.64□□□□□ -1.51
CSMD3-208ENST00000497026 GPR27Q9NS67 375 aa5.64□□□□□ -1.51
CSMD3-208ENST00000497026 TCP11L1Q9NUJ3 509 aa5.64□□□□□ -1.51
CSMD3-208ENST00000497026 HOXC10Q9NYD6 342 aa5.64□□□□□ -1.51
CSMD3-208ENST00000497026 STX8Q9UNK0 236 aa5.64□□□□□ -1.51
CSMD3-208ENST00000497026 ALPK3Q96L96 1907 aa5.64□□□□□ -1.51
CSMD3-208ENST00000497026 LRRC37A2A6NM11 1700 aa5.63□□□□□ -1.51
CSMD3-208ENST00000497026 B4E1Z4 1266 aa5.63□□□□□ -1.51
CSMD3-208ENST00000497026 ZNF213O14771 459 aa5.63□□□□□ -1.51
CSMD3-208ENST00000497026 STK10O94804 968 aaKnown RBP5.63□□□□□ -1.51
CSMD3-208ENST00000497026 LTFP02788 710 aa5.63□□□□□ -1.51
CSMD3-208ENST00000497026 PCP11498 1178 aaKnown RBP5.63□□□□□ -1.51
CSMD3-208ENST00000497026 CCL5P13501 91 aa5.63□□□□□ -1.51
CSMD3-208ENST00000497026 EN2P19622 333 aaPredicted RBP5.63□□□□□ -1.51
CSMD3-208ENST00000497026 FAM193AP78312 1265 aa5.63□□□□□ -1.51
CSMD3-208ENST00000497026 CCNA1P78396 465 aa5.63□□□□□ -1.51
CSMD3-208ENST00000497026 CCL14Q16627 93 aa5.63□□□□□ -1.51
CSMD3-208ENST00000497026 BMP2KLQ5H9B9 411 aa5.63□□□□□ -1.51
CSMD3-208ENST00000497026 PRR31Q5SQ13 230 aa5.63□□□□□ -1.51
CSMD3-208ENST00000497026 MAP3K21Q5TCX8 1036 aa5.63□□□□□ -1.51
CSMD3-208ENST00000497026 SLFN13Q68D06 897 aa5.63□□□□□ -1.51
CSMD3-208ENST00000497026 MFSD6Q6ZSS7 791 aa5.63□□□□□ -1.51
CSMD3-208ENST00000497026 STOX1Q6ZVD7 989 aa5.63□□□□□ -1.51
CSMD3-208ENST00000497026 SPATC1Q76KD6 591 aa5.63□□□□□ -1.51
CSMD3-208ENST00000497026 MB21D1Q8N884 522 aa5.63□□□□□ -1.51
CSMD3-208ENST00000497026 SHCBP1Q8NEM2 672 aa5.63□□□□□ -1.51
CSMD3-208ENST00000497026 CLEC4DQ8WXI8 215 aa5.63□□□□□ -1.51
CSMD3-208ENST00000497026 CHMP4CQ96CF2 233 aa5.63□□□□□ -1.51
CSMD3-208ENST00000497026 SGSM3Q96HU1 749 aa5.63□□□□□ -1.51
CSMD3-208ENST00000497026 SLF1Q9BQI6 1058 aa5.63□□□□□ -1.51
CSMD3-208ENST00000497026 TMEM47Q9BQJ4 181 aa5.63□□□□□ -1.51
CSMD3-208ENST00000497026 TMPRSS5Q9H3S3 457 aa5.63□□□□□ -1.51
CSMD3-208ENST00000497026 PCDH18Q9HCL0 1135 aa5.63□□□□□ -1.51
CSMD3-208ENST00000497026 TOMM22Q9NS69 142 aa5.63□□□□□ -1.51
CSMD3-208ENST00000497026 FLRT1Q9NZU1 646 aa5.63□□□□□ -1.51
CSMD3-208ENST00000497026 ASH2LQ9UBL3 628 aa5.63□□□□□ -1.51
CSMD3-208ENST00000497026 PFDN2Q9UHV9 154 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms