RNA–Protein interactions for RNA: ENST00000496925.5

PSMD2-220, Transcript of proteasome 26S subunit, non-ATPase 2, human

TSL 2

Gene PSMD2, Length 723 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD2-220	ENST00000496925	ATP2C1	P98194	919 aa	Predicted RBP	11.11	□□□□□ -0.63
PSMD2-220	ENST00000496925	GRIN1	Q05586	938 aa		11.11	□□□□□ -0.63
PSMD2-220	ENST00000496925	PPP2R3A	Q06190	1150 aa		11.11	□□□□□ -0.63
PSMD2-220	ENST00000496925	MCL1	Q07820	350 aa		11.11	□□□□□ -0.63
PSMD2-220	ENST00000496925	TPGS2	Q68CL5	300 aa		11.11	□□□□□ -0.63
PSMD2-220	ENST00000496925	HEATR6	Q6AI08	1181 aa	Known RBP	11.11	□□□□□ -0.63
PSMD2-220	ENST00000496925	JADE1	Q6IE81	842 aa		11.11	□□□□□ -0.63
PSMD2-220	ENST00000496925	TTC9B	Q8N6N2	239 aa		11.11	□□□□□ -0.63
PSMD2-220	ENST00000496925	SHKBP1	Q8TBC3	707 aa		11.11	□□□□□ -0.63
PSMD2-220	ENST00000496925	GIPC2	Q8TF65	315 aa		11.11	□□□□□ -0.63
PSMD2-220	ENST00000496925	LRRC15	Q8TF66	581 aa		11.11	□□□□□ -0.63
PSMD2-220	ENST00000496925	RSPRY1	Q96DX4	576 aa		11.11	□□□□□ -0.63
PSMD2-220	ENST00000496925	ZFYVE19	Q96K21	471 aa		11.11	□□□□□ -0.63
PSMD2-220	ENST00000496925	NELL2	Q99435	816 aa		11.11	□□□□□ -0.63
PSMD2-220	ENST00000496925	REEP2	Q9BRK0	252 aa		11.11	□□□□□ -0.63
PSMD2-220	ENST00000496925	MSTO1	Q9BUK6	570 aa		11.11	□□□□□ -0.63
PSMD2-220	ENST00000496925	IKZF4	Q9H2S9	585 aa		11.11	□□□□□ -0.63
PSMD2-220	ENST00000496925	ATXN3L	Q9H3M9	355 aa		11.11	□□□□□ -0.63
PSMD2-220	ENST00000496925	C17orf75	Q9HAS0	396 aa		11.11	□□□□□ -0.63
PSMD2-220	ENST00000496925	FBXO4	Q9UKT5	387 aa		11.11	□□□□□ -0.63
PSMD2-220	ENST00000496925	USP18	Q9UMW8	372 aa		11.11	□□□□□ -0.63
PSMD2-220	ENST00000496925	YIPF1	Q9Y548	306 aa		11.11	□□□□□ -0.63
PSMD2-220	ENST00000496925	PIAS3	Q9Y6X2	628 aa		11.11	□□□□□ -0.63
PSMD2-220	ENST00000496925	NCAN	O14594	1321 aa		11.1	□□□□□ -0.63
PSMD2-220	ENST00000496925	TTC26	A0AVF1	554 aa		11.1	□□□□□ -0.63
PSMD2-220	ENST00000496925	SLC38A8	A6NNN8	435 aa		11.1	□□□□□ -0.63
PSMD2-220	ENST00000496925	ANKRD63	C9JTQ0	380 aa		11.1	□□□□□ -0.63
PSMD2-220	ENST00000496925	DPYSL4	O14531	572 aa		11.1	□□□□□ -0.63
PSMD2-220	ENST00000496925	SPTLC1	O15269	473 aa		11.1	□□□□□ -0.63
PSMD2-220	ENST00000496925	CD2BP2	O95400	341 aa	Known RBP	11.1	□□□□□ -0.63
PSMD2-220	ENST00000496925	PSMC3	P17980	439 aa		11.1	□□□□□ -0.63
PSMD2-220	ENST00000496925	UBA7	P41226	1012 aa		11.1	□□□□□ -0.63
PSMD2-220	ENST00000496925	ACOT2	P49753	483 aa		11.1	□□□□□ -0.63
PSMD2-220	ENST00000496925	EPHB3	P54753	998 aa		11.1	□□□□□ -0.63
PSMD2-220	ENST00000496925	FOXK2	Q01167	660 aa		11.1	□□□□□ -0.63
PSMD2-220	ENST00000496925	DMWD	Q09019	674 aa		11.1	□□□□□ -0.63
PSMD2-220	ENST00000496925	SRSF5	Q13243	272 aa	Known RBP	11.1	□□□□□ -0.63
PSMD2-220	ENST00000496925	KARS	Q15046	597 aa	Known RBP	11.1	□□□□□ -0.63
PSMD2-220	ENST00000496925	ENOX2	Q16206	610 aa	Known RBP	11.1	□□□□□ -0.63
PSMD2-220	ENST00000496925	C8orf34	Q49A92	452 aa		11.1	□□□□□ -0.63
PSMD2-220	ENST00000496925	TMEM119	Q4V9L6	283 aa		11.1	□□□□□ -0.63
PSMD2-220	ENST00000496925	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	11.1	□□□□□ -0.63
PSMD2-220	ENST00000496925	RILPL1	Q5EBL4	403 aa		11.1	□□□□□ -0.63
PSMD2-220	ENST00000496925	OVOS1	Q6IE37	1185 aa		11.1	□□□□□ -0.63
PSMD2-220	ENST00000496925	ARMCX5	Q6P1M9	558 aa		11.1	□□□□□ -0.63
PSMD2-220	ENST00000496925	ZPBP2	Q6X784	338 aa		11.1	□□□□□ -0.63
PSMD2-220	ENST00000496925	PRR23B	Q6ZRT6	265 aa		11.1	□□□□□ -0.63
PSMD2-220	ENST00000496925	RTL10	Q7L3V2	364 aa		11.1	□□□□□ -0.63
PSMD2-220	ENST00000496925	ERMP1	Q7Z2K6	904 aa		11.1	□□□□□ -0.63
PSMD2-220	ENST00000496925	TTC16	Q8NEE8	873 aa		11.1	□□□□□ -0.63
PSMD2-220	ENST00000496925	CSGALNACT1	Q8TDX6	532 aa		11.1	□□□□□ -0.63
PSMD2-220	ENST00000496925	NOC3L	Q8WTT2	800 aa	Known RBP	11.1	□□□□□ -0.63
PSMD2-220	ENST00000496925	IRF7	Q92985	503 aa		11.1	□□□□□ -0.63
PSMD2-220	ENST00000496925	CLDN23	Q96B33	292 aa		11.1	□□□□□ -0.63
PSMD2-220	ENST00000496925	CALML4	Q96GE6	196 aa		11.1	□□□□□ -0.63
PSMD2-220	ENST00000496925	TMX3	Q96JJ7	454 aa		11.1	□□□□□ -0.63
PSMD2-220	ENST00000496925	SENP8	Q96LD8	212 aa		11.1	□□□□□ -0.63
PSMD2-220	ENST00000496925	SEPT5	Q99719	369 aa	Predicted RBP	11.1	□□□□□ -0.63
PSMD2-220	ENST00000496925	TIPIN	Q9BVW5	301 aa		11.1	□□□□□ -0.63
PSMD2-220	ENST00000496925	OSBPL6	Q9BZF3	934 aa		11.1	□□□□□ -0.63
PSMD2-220	ENST00000496925	SMG9	Q9H0W8	520 aa	Known RBP	11.1	□□□□□ -0.63
PSMD2-220	ENST00000496925	AVEN	Q9NQS1	362 aa	Predicted RBP	11.1	□□□□□ -0.63
PSMD2-220	ENST00000496925	ZSCAN32	Q9NX65	697 aa		11.1	□□□□□ -0.63
PSMD2-220	ENST00000496925	TBX20	Q9UMR3	447 aa		11.1	□□□□□ -0.63
PSMD2-220	ENST00000496925	UBQLN1	Q9UMX0	589 aa	Known RBP	11.1	□□□□□ -0.63
PSMD2-220	ENST00000496925	SMC3	Q9UQE7	1217 aa		11.1	□□□□□ -0.63
PSMD2-220	ENST00000496925	CHURC1-FNTB	B4DL54	471 aa		11.09	□□□□□ -0.63
PSMD2-220	ENST00000496925	MAN2B1	O00754	1011 aa		11.09	□□□□□ -0.63
PSMD2-220	ENST00000496925	HNRNPDL	O14979	420 aa	Known RBP	11.09	□□□□□ -0.63
PSMD2-220	ENST00000496925	CENPB	P07199	599 aa	Predicted RBP	11.09	□□□□□ -0.63
PSMD2-220	ENST00000496925	NFIC	P08651	508 aa		11.09	□□□□□ -0.63
PSMD2-220	ENST00000496925	LRPAP1	P30533	357 aa		11.09	□□□□□ -0.63
PSMD2-220	ENST00000496925	FNTB	P49356	437 aa		11.09	□□□□□ -0.63
PSMD2-220	ENST00000496925	NCKAP1L	P55160	1127 aa		11.09	□□□□□ -0.63
PSMD2-220	ENST00000496925	CYP4F8	P98187	520 aa		11.09	□□□□□ -0.63
PSMD2-220	ENST00000496925	SATB1	Q01826	763 aa		11.09	□□□□□ -0.63
PSMD2-220	ENST00000496925	SLC39A12	Q504Y0	691 aa		11.09	□□□□□ -0.63
PSMD2-220	ENST00000496925	HYI	Q5T013	277 aa		11.09	□□□□□ -0.63
PSMD2-220	ENST00000496925	GPR158	Q5T848	1215 aa		11.09	□□□□□ -0.63
PSMD2-220	ENST00000496925	LARP1B	Q659C4	914 aa	Known RBP	11.09	□□□□□ -0.63
PSMD2-220	ENST00000496925	DYM	Q7RTS9	669 aa		11.09	□□□□□ -0.63
PSMD2-220	ENST00000496925	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	11.09	□□□□□ -0.63
PSMD2-220	ENST00000496925	ARID3B	Q8IVW6	561 aa	Predicted RBP	11.09	□□□□□ -0.63
PSMD2-220	ENST00000496925	BEST2	Q8NFU1	509 aa		11.09	□□□□□ -0.63
PSMD2-220	ENST00000496925	LRRC3B	Q96PB8	259 aa		11.09	□□□□□ -0.63
PSMD2-220	ENST00000496925	LPIN3	Q9BQK8	851 aa		11.09	□□□□□ -0.63
PSMD2-220	ENST00000496925	DNAJC25	Q9H1X3	360 aa		11.09	□□□□□ -0.63
PSMD2-220	ENST00000496925	PLEKHA5	Q9HAU0	1116 aa		11.09	□□□□□ -0.63
PSMD2-220	ENST00000496925	TBC1D7	Q9P0N9	293 aa		11.09	□□□□□ -0.63
PSMD2-220	ENST00000496925	LARS	Q9P2J5	1176 aa	Known RBP	11.09	□□□□□ -0.63
PSMD2-220	ENST00000496925	KCNG1	Q9UIX4	513 aa		11.09	□□□□□ -0.63
PSMD2-220	ENST00000496925	SMG5	Q9UPR3	1016 aa	Known RBP	11.09	□□□□□ -0.63
PSMD2-220	ENST00000496925	KIF3A	Q9Y496	699 aa		11.09	□□□□□ -0.63
PSMD2-220	ENST00000496925	DOCK8	Q8NF50	2099 aa		11.08	□□□□□ -0.63
PSMD2-220	ENST00000496925	RIF1	Q5UIP0	2472 aa	Known RBP	11.08	□□□□□ -0.64
PSMD2-220	ENST00000496925	DCDC2B	A2VCK2	349 aa		11.08	□□□□□ -0.64
PSMD2-220	ENST00000496925	MTMR11	A4FU01	709 aa		11.08	□□□□□ -0.64
PSMD2-220	ENST00000496925		M0QZQ0	153 aa		11.08	□□□□□ -0.64
PSMD2-220	ENST00000496925	CYB561D2	O14569	222 aa		11.08	□□□□□ -0.64
PSMD2-220	ENST00000496925	OGT	O15294	1046 aa		11.08	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms