RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 PRAMEF9Q5VWM5 478 aa4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 TSHZ3Q63HK5 1081 aa4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 TLDC1Q6P9B6 456 aa4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 TRMT10BQ6PF06 316 aaKnown RBP4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 Q6ZUG5 572 aa4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 ESPNLQ6ZVH7 1005 aa4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 LARP4Q71RC2 724 aaKnown RBP eCLIP4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 SRGAP1Q7Z6B7 1085 aa4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 TBC1D1Q86TI0 1168 aaPredicted RBP4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 MYCT1Q8N699 235 aa4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 NAXEQ8NCW5 288 aa4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 PPP1R35Q8TAP8 253 aa4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 DEPTORQ8TB45 409 aa4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 CALML6Q8TD86 181 aa4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 NSUN6Q8TEA1 469 aaKnown RBP4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 NELL1Q92832 810 aa4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 TEKT5Q96M29 485 aa4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 FDXACB1Q9BRP7 624 aaPredicted RBP4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 APOL5Q9BWW9 433 aa4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 MTG2Q9H4K7 406 aa4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 BLOC1S4Q9NUP1 217 aa4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 ADAM29Q9UKF5 820 aa4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 SLC4A7Q9Y6M7 1214 aa4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 NUMBLQ9Y6R0 609 aa4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 NRXN1Q9ULB1 1477 aa4.3□□□□□ -1.72
EXOSC3-208ENST00000496910 DCCP43146 1447 aa4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 MYPNQ86TC9 1320 aa4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 SBF1O95248 1867 aa4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 KRTAP9-6A0A140TA67 174 aa4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 A0A1W2PPC1 479 aa4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 BICDL2A1A5D9 508 aa4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 C9orf118A6NHY6 69 aa4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 RASA4BC9J798 803 aa4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 NCAM2O15394 837 aa4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 RASA4O43374 803 aa4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 DHX16O60231 1041 aaKnown RBP4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 OFD1O75665 1012 aa4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 CYP7B1O75881 506 aa4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 SEC24DO94855 1032 aaPredicted RBP4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 CFBP00751 764 aa4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 CD4P01730 458 aa4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 RPN1P04843 607 aaKnown RBP4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 HSD3B1P14060 373 aa4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 ADCY8P40145 1251 aa4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 MTNR1BP49286 362 aa4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 BCAR1P56945 870 aa4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 JAG1P78504 1218 aa4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 MPP1Q00013 466 aa4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 FAPQ12884 760 aa4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 NFATC3Q12968 1075 aa4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 G3BP1Q13283 466 aaKnown RBP eCLIP4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 SEMA5AQ13591 1074 aa4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 CT83Q5H943 113 aa4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 INTS11Q5TA45 600 aaKnown RBP4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 TCERG1LQ5VWI1 586 aa4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 CIAPIN1Q6FI81 312 aa4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 GRAMD4Q6IC98 578 aa4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 DPP8Q6V1X1 898 aaPredicted RBP4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 TTLL7Q6ZT98 887 aa4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 CCDC149Q6ZUS6 474 aa4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 BMP8AQ7Z5Y6 402 aa4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 TMEM151BQ8IW70 566 aa4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 TSPEARQ8WU66 669 aa4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 RIPOR3Q96MK2 946 aa4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 FAM193BQ96PV7 902 aaPredicted RBP4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 ANO3Q9BYT9 981 aa4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 GTPBP4Q9BZE4 634 aaKnown RBP4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 WNT8AQ9H1J5 351 aa4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 BHMT2Q9H2M3 363 aa4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 KIAA1586Q9HCI6 787 aa4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 AGO4Q9HCK5 861 aaKnown RBP4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 SMYD2Q9NRG4 433 aa4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 ZNF277Q9NRM2 450 aaPredicted RBP4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 RASSF1Q9NS23 344 aa4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 SMC4Q9NTJ3 1288 aa4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 CCM2LQ9NUG4 571 aaPredicted RBP4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 KCMF1Q9P0J7 381 aa4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 PDP2Q9P2J9 529 aa4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 CDC23Q9UJX2 597 aa4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 GJD2Q9UKL4 321 aa4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 TPCN1Q9ULQ1 816 aa4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 NOC2LQ9Y3T9 749 aaKnown RBP4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 ACACBO00763 2458 aa4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 MAP1BP46821 2468 aaKnown RBP4.29□□□□□ -1.72
EXOSC3-208ENST00000496910 ABCA12Q86UK0 2595 aa4.28□□□□□ -1.72
EXOSC3-208ENST00000496910 RBBP6Q7Z6E9 1792 aaKnown RBP4.28□□□□□ -1.72
EXOSC3-208ENST00000496910 ITPR3Q14573 2671 aa4.28□□□□□ -1.72
EXOSC3-208ENST00000496910 A0A0G2JNJ9 132 aa4.28□□□□□ -1.72
EXOSC3-208ENST00000496910 CUTAO60888 179 aa4.28□□□□□ -1.72
EXOSC3-208ENST00000496910 MBD4O95243 580 aa4.28□□□□□ -1.72
EXOSC3-208ENST00000496910 PTMAP06454 111 aaKnown RBP4.28□□□□□ -1.72
EXOSC3-208ENST00000496910 IFIT1P09914 478 aaKnown RBP4.28□□□□□ -1.72
EXOSC3-208ENST00000496910 ZNF888P0CJ79 500 aaPredicted RBP4.28□□□□□ -1.72
EXOSC3-208ENST00000496910 AKAP5P24588 427 aa4.28□□□□□ -1.72
EXOSC3-208ENST00000496910 SCAND1P57086 179 aa4.28□□□□□ -1.72
EXOSC3-208ENST00000496910 APBA1Q02410 837 aa4.28□□□□□ -1.72
EXOSC3-208ENST00000496910 GRM1Q13255 1194 aa4.28□□□□□ -1.72
EXOSC3-208ENST00000496910 WDR72Q3MJ13 1102 aa4.28□□□□□ -1.72
EXOSC3-208ENST00000496910 FAM133BQ5BKY9 247 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms