RNA–Protein interactions for RNA: ENST00000496514.5

PDE6B-212, Transcript of phosphodiesterase 6B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDE6B, Length 3,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-212ENST00000496514 VTNP04004 478 aa13.1□□□□□ -0.31
PDE6B-212ENST00000496514 TXNP10599 105 aaKnown RBP13.1□□□□□ -0.31
PDE6B-212ENST00000496514 CREB1P16220 341 aa13.1□□□□□ -0.31
PDE6B-212ENST00000496514 MDH1P40925 334 aaKnown RBP13.1□□□□□ -0.31
PDE6B-212ENST00000496514 QPCTQ16769 361 aa13.1□□□□□ -0.31
PDE6B-212ENST00000496514 EFCAB13Q8IY85 973 aa13.1□□□□□ -0.31
PDE6B-212ENST00000496514 ZNF606Q8WXB4 792 aa13.1□□□□□ -0.31
PDE6B-212ENST00000496514 RPS6KC1Q96S38 1066 aa13.1□□□□□ -0.31
PDE6B-212ENST00000496514 RASAL2Q9UJF2 1139 aa13.1□□□□□ -0.31
PDE6B-212ENST00000496514 MTUS1Q9ULD2 1270 aa13.1□□□□□ -0.31
PDE6B-212ENST00000496514 ECEL1O95672 775 aa13.09□□□□□ -0.31
PDE6B-212ENST00000496514 CTNNA2P26232 953 aa13.09□□□□□ -0.31
PDE6B-212ENST00000496514 CHRNA3P32297 505 aa13.09□□□□□ -0.31
PDE6B-212ENST00000496514 NOMO3P69849 1222 aa13.09□□□□□ -0.31
PDE6B-212ENST00000496514 LRRC14Q15048 493 aa13.09□□□□□ -0.31
PDE6B-212ENST00000496514 ZNF568Q3ZCX4 644 aa13.09□□□□□ -0.31
PDE6B-212ENST00000496514 DENND2CQ68D51 928 aa13.09□□□□□ -0.31
PDE6B-212ENST00000496514 KDM7AQ6ZMT4 941 aa13.09□□□□□ -0.31
PDE6B-212ENST00000496514 RIOX2Q8IUF8 465 aa13.09□□□□□ -0.31
PDE6B-212ENST00000496514 FMNL3Q8IVF7 1028 aa13.09□□□□□ -0.31
PDE6B-212ENST00000496514 EMC1Q8N766 993 aa13.09□□□□□ -0.31
PDE6B-212ENST00000496514 OPTNQ96CV9 577 aa13.09□□□□□ -0.31
PDE6B-212ENST00000496514 FGD4Q96M96 766 aa13.09□□□□□ -0.31
PDE6B-212ENST00000496514 HMGXB4Q9UGU5 601 aa13.09□□□□□ -0.31
PDE6B-212ENST00000496514 EBAG9O00559 213 aa13.09□□□□□ -0.31
PDE6B-212ENST00000496514 HGSO14964 777 aaPredicted RBP13.09□□□□□ -0.31
PDE6B-212ENST00000496514 MSCO60682 206 aa13.09□□□□□ -0.31
PDE6B-212ENST00000496514 ATG7O95352 703 aa13.09□□□□□ -0.31
PDE6B-212ENST00000496514 MAMLD1Q13495 774 aa13.09□□□□□ -0.31
PDE6B-212ENST00000496514 TRPC3Q13507 836 aa13.09□□□□□ -0.31
PDE6B-212ENST00000496514 RNF187Q5TA31 235 aaPredicted RBP13.09□□□□□ -0.31
PDE6B-212ENST00000496514 EFCAB12Q6NXP0 572 aa13.09□□□□□ -0.31
PDE6B-212ENST00000496514 MON1BQ7L1V2 547 aa13.09□□□□□ -0.31
PDE6B-212ENST00000496514 DNERQ8NFT8 737 aa13.09□□□□□ -0.31
PDE6B-212ENST00000496514 CGRRF1Q99675 332 aa13.09□□□□□ -0.31
PDE6B-212ENST00000496514 GPR20Q99678 358 aa13.09□□□□□ -0.31
PDE6B-212ENST00000496514 UVRAGQ9P2Y5 699 aa13.09□□□□□ -0.31
PDE6B-212ENST00000496514 FAM169AQ9Y6X4 670 aa13.09□□□□□ -0.31
PDE6B-212ENST00000496514 SOCS7O14512 581 aa13.09□□□□□ -0.31
PDE6B-212ENST00000496514 POTEJP0CG39 1038 aa13.09□□□□□ -0.31
PDE6B-212ENST00000496514 SNRPFP62306 86 aaKnown RBP13.09□□□□□ -0.31
PDE6B-212ENST00000496514 OGDHQ02218 1023 aa13.09□□□□□ -0.31
PDE6B-212ENST00000496514 KCTD2Q14681 263 aa13.09□□□□□ -0.31
PDE6B-212ENST00000496514 GPAT2Q6NUI2 795 aa13.09□□□□□ -0.31
PDE6B-212ENST00000496514 ABRAQ8N0Z2 381 aa13.09□□□□□ -0.31
PDE6B-212ENST00000496514 LRRN4Q8WUT4 740 aa13.09□□□□□ -0.31
PDE6B-212ENST00000496514 IMPG2Q9BZV3 1241 aa13.09□□□□□ -0.31
PDE6B-212ENST00000496514 CISHQ9NSE2 258 aa13.09□□□□□ -0.31
PDE6B-212ENST00000496514 ARID2Q68CP9 1835 aa13.08□□□□□ -0.31
PDE6B-212ENST00000496514 HMGB1P1B2RPK0 211 aaPredicted RBP13.08□□□□□ -0.32
PDE6B-212ENST00000496514 ZBTB42B2RXF5 422 aa13.08□□□□□ -0.32
PDE6B-212ENST00000496514 TMEM191BP0C7N4 346 aa13.08□□□□□ -0.32
PDE6B-212ENST00000496514 ADCY8P40145 1251 aa13.08□□□□□ -0.32
PDE6B-212ENST00000496514 NRLP54845 237 aa13.08□□□□□ -0.32
PDE6B-212ENST00000496514 PLCB4Q15147 1175 aa13.08□□□□□ -0.32
PDE6B-212ENST00000496514 TARBP2Q15633 366 aaKnown RBP13.08□□□□□ -0.32
PDE6B-212ENST00000496514 PTGISQ16647 500 aa13.08□□□□□ -0.32
PDE6B-212ENST00000496514 MAPK6Q16659 721 aa13.08□□□□□ -0.32
PDE6B-212ENST00000496514 KYNUQ16719 465 aa13.08□□□□□ -0.32
PDE6B-212ENST00000496514 METTL7BQ6UX53 244 aa13.08□□□□□ -0.32
PDE6B-212ENST00000496514 GSTA5Q7RTV2 222 aa13.08□□□□□ -0.32
PDE6B-212ENST00000496514 C9orf72Q96LT7 481 aa13.08□□□□□ -0.32
PDE6B-212ENST00000496514 SCLT1Q96NL6 688 aa13.08□□□□□ -0.32
PDE6B-212ENST00000496514 MMP19Q99542 508 aa13.08□□□□□ -0.32
PDE6B-212ENST00000496514 CXCL16Q9H2A7 254 aa13.08□□□□□ -0.32
PDE6B-212ENST00000496514 ZWILCHQ9H900 591 aa13.08□□□□□ -0.32
PDE6B-212ENST00000496514 ERLIN2O94905 339 aa13.08□□□□□ -0.32
PDE6B-212ENST00000496514 SKOR1P84550 965 aa13.08□□□□□ -0.32
PDE6B-212ENST00000496514 NEDD9Q14511 834 aa13.08□□□□□ -0.32
PDE6B-212ENST00000496514 WDR72Q3MJ13 1102 aa13.08□□□□□ -0.32
PDE6B-212ENST00000496514 FAM160B1Q5W0V3 765 aa13.08□□□□□ -0.32
PDE6B-212ENST00000496514 DCUN1D2Q6PH85 259 aa13.08□□□□□ -0.32
PDE6B-212ENST00000496514 TAX1BP1Q86VP1 789 aa13.08□□□□□ -0.32
PDE6B-212ENST00000496514 DDX27Q96GQ7 796 aaKnown RBP13.08□□□□□ -0.32
PDE6B-212ENST00000496514 CCT8L2Q96SF2 557 aa13.08□□□□□ -0.32
PDE6B-212ENST00000496514 IVNS1ABPQ9Y6Y0 642 aa13.08□□□□□ -0.32
PDE6B-212ENST00000496514 PAPPA2Q9BXP8 1791 aa13.08□□□□□ -0.32
PDE6B-212ENST00000496514 ADGRA2Q96PE1 1338 aa13.08□□□□□ -0.32
PDE6B-212ENST00000496514 BHMG1C9JSJ3 638 aaPredicted RBP13.07□□□□□ -0.32
PDE6B-212ENST00000496514 GOLGA8MH3BSY2 632 aa13.07□□□□□ -0.32
PDE6B-212ENST00000496514 PPFIA2O75334 1257 aa13.07□□□□□ -0.32
PDE6B-212ENST00000496514 MAFO75444 373 aaPredicted RBP13.07□□□□□ -0.32
PDE6B-212ENST00000496514 NFICP08651 508 aa13.07□□□□□ -0.32
PDE6B-212ENST00000496514 ICAM3P32942 547 aa13.07□□□□□ -0.32
PDE6B-212ENST00000496514 ITGA8P53708 1063 aa13.07□□□□□ -0.32
PDE6B-212ENST00000496514 CALCOCO2Q13137 446 aa13.07□□□□□ -0.32
PDE6B-212ENST00000496514 DHX34Q14147 1143 aaKnown RBP13.07□□□□□ -0.32
PDE6B-212ENST00000496514 CYP4F22Q6NT55 531 aa13.07□□□□□ -0.32
PDE6B-212ENST00000496514 MICALL1Q8N3F8 863 aa13.07□□□□□ -0.32
PDE6B-212ENST00000496514 SEC14L1Q92503 715 aa13.07□□□□□ -0.32
PDE6B-212ENST00000496514 CDCA5Q96FF9 252 aa13.07□□□□□ -0.32
PDE6B-212ENST00000496514 CXorf56Q9H5V9 222 aa13.07□□□□□ -0.32
PDE6B-212ENST00000496514 BRCA1P38398 1863 aaKnown RBP13.07□□□□□ -0.32
PDE6B-212ENST00000496514 BANF1O75531 89 aa13.07□□□□□ -0.32
PDE6B-212ENST00000496514 IFNB1P01574 187 aa13.07□□□□□ -0.32
PDE6B-212ENST00000496514 CYP1A1P04798 512 aaPredicted RBP13.07□□□□□ -0.32
PDE6B-212ENST00000496514 HADHBP55084 474 aaKnown RBP13.07□□□□□ -0.32
PDE6B-212ENST00000496514 ZNF699Q32M78 642 aa13.07□□□□□ -0.32
PDE6B-212ENST00000496514 RAB6CQ53S08 254 aa13.07□□□□□ -0.32
PDE6B-212ENST00000496514 SH3D19Q5HYK7 790 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms