RNA–Protein interactions for RNA: ENST00000496340.1

NEPRO-224, Transcript of nucleolus and neural progenitor protein, humanhuman

TSL 4

Gene NEPRO, Length 520 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEPRO-224ENST00000496340 FAM13BQ9NYF5 915 aa11.8□□□□□ -0.52
NEPRO-224ENST00000496340 DNMT3BQ9UBC3 853 aaKnown RBP11.8□□□□□ -0.52
NEPRO-224ENST00000496340 SIX4Q9UIU6 781 aa11.8□□□□□ -0.52
NEPRO-224ENST00000496340 NUB1Q9Y5A7 615 aa11.8□□□□□ -0.52
NEPRO-224ENST00000496340 SYN3O14994 580 aa11.79□□□□□ -0.52
NEPRO-224ENST00000496340 HCRTO43612 131 aa11.79□□□□□ -0.52
NEPRO-224ENST00000496340 TRAPPC3O43617 180 aa11.79□□□□□ -0.52
NEPRO-224ENST00000496340 EXTL3O43909 919 aa11.79□□□□□ -0.52
NEPRO-224ENST00000496340 ALADP13716 330 aa11.79□□□□□ -0.52
NEPRO-224ENST00000496340 KYAT1Q16773 422 aa11.79□□□□□ -0.52
NEPRO-224ENST00000496340 PTPN21Q16825 1174 aa11.79□□□□□ -0.52
NEPRO-224ENST00000496340 CCDC142Q17RM4 750 aa11.79□□□□□ -0.52
NEPRO-224ENST00000496340 SLC5A9Q2M3M2 681 aa11.79□□□□□ -0.52
NEPRO-224ENST00000496340 KMT5BQ4FZB7 885 aa11.79□□□□□ -0.52
NEPRO-224ENST00000496340 CTXN3Q4LDR2 81 aa11.79□□□□□ -0.52
NEPRO-224ENST00000496340 LRRTM3Q86VH5 581 aa11.79□□□□□ -0.52
NEPRO-224ENST00000496340 ZDHHC14Q8IZN3 488 aa11.79□□□□□ -0.52
NEPRO-224ENST00000496340 SYCP3Q8IZU3 236 aa11.79□□□□□ -0.52
NEPRO-224ENST00000496340 ZNF461Q8TAF7 563 aa11.79□□□□□ -0.52
NEPRO-224ENST00000496340 C1QTNF1Q9BXJ1 281 aa11.79□□□□□ -0.52
NEPRO-224ENST00000496340 AGPAT3Q9NRZ7 376 aa11.79□□□□□ -0.52
NEPRO-224ENST00000496340 ZDHHC7Q9NXF8 308 aa11.79□□□□□ -0.52
NEPRO-224ENST00000496340 RBAKQ9NYW8 714 aaPredicted RBP11.79□□□□□ -0.52
NEPRO-224ENST00000496340 HSPBP1Q9NZL4 362 aa11.79□□□□□ -0.52
NEPRO-224ENST00000496340 DERAQ9Y315 318 aa11.79□□□□□ -0.52
NEPRO-224ENST00000496340 C2CD2Q9Y426 696 aa11.79□□□□□ -0.52
NEPRO-224ENST00000496340 CLUHO75153 1309 aa11.79□□□□□ -0.52
NEPRO-224ENST00000496340 COL4A3Q01955 1670 aa11.78□□□□□ -0.52
NEPRO-224ENST00000496340 PVALEFA0A1B0GWK0 134 aa11.78□□□□□ -0.52
NEPRO-224ENST00000496340 SPDYE4A6NLX3 237 aa11.78□□□□□ -0.52
NEPRO-224ENST00000496340 EIF3DO15371 548 aaKnown RBP eCLIP11.78□□□□□ -0.52
NEPRO-224ENST00000496340 NARSO43776 548 aaKnown RBP11.78□□□□□ -0.52
NEPRO-224ENST00000496340 SOAT2O75908 522 aa11.78□□□□□ -0.52
NEPRO-224ENST00000496340 ATF2P15336 505 aa11.78□□□□□ -0.52
NEPRO-224ENST00000496340 ABCD1P33897 745 aa11.78□□□□□ -0.52
NEPRO-224ENST00000496340 CCR2P41597 374 aa11.78□□□□□ -0.52
NEPRO-224ENST00000496340 AMPD3Q01432 767 aa11.78□□□□□ -0.52
NEPRO-224ENST00000496340 CREMQ03060 361 aa11.78□□□□□ -0.52
NEPRO-224ENST00000496340 POSTNQ15063 836 aa11.78□□□□□ -0.52
NEPRO-224ENST00000496340 BMT2Q1RMZ1 405 aa11.78□□□□□ -0.52
NEPRO-224ENST00000496340 IER5LQ5T953 404 aa11.78□□□□□ -0.52
NEPRO-224ENST00000496340 ARMCX5Q6P1M9 558 aa11.78□□□□□ -0.52
NEPRO-224ENST00000496340 TRIM67Q6ZTA4 783 aa11.78□□□□□ -0.52
NEPRO-224ENST00000496340 CCDC149Q6ZUS6 474 aa11.78□□□□□ -0.52
NEPRO-224ENST00000496340 CD302Q8IX05 232 aa11.78□□□□□ -0.52
NEPRO-224ENST00000496340 FSIP1Q8NA03 581 aa11.78□□□□□ -0.52
NEPRO-224ENST00000496340 TDRD5Q8NAT2 981 aaKnown RBP11.78□□□□□ -0.52
NEPRO-224ENST00000496340 RDH13Q8NBN7 331 aa11.78□□□□□ -0.52
NEPRO-224ENST00000496340 BEST2Q8NFU1 509 aa11.78□□□□□ -0.52
NEPRO-224ENST00000496340 NOC3LQ8WTT2 800 aaKnown RBP11.78□□□□□ -0.52
NEPRO-224ENST00000496340 ZNF516Q92618 1163 aa11.78□□□□□ -0.52
NEPRO-224ENST00000496340 ELMO3Q96BJ8 720 aa11.78□□□□□ -0.52
NEPRO-224ENST00000496340 PGLYRP2Q96PD5 576 aa11.78□□□□□ -0.52
NEPRO-224ENST00000496340 TMEM206Q9H813 350 aa11.78□□□□□ -0.52
NEPRO-224ENST00000496340 KCNK12Q9HB15 430 aa11.78□□□□□ -0.52
NEPRO-224ENST00000496340 CEP72Q9P209 647 aa11.78□□□□□ -0.52
NEPRO-224ENST00000496340 EXOC7Q9UPT5 735 aa11.78□□□□□ -0.52
NEPRO-224ENST00000496340 USTQ9Y2C2 406 aa11.78□□□□□ -0.52
NEPRO-224ENST00000496340 A0A1W2PQ27 194 aa11.77□□□□□ -0.53
NEPRO-224ENST00000496340 A0A1W2PQ64 194 aa11.77□□□□□ -0.53
NEPRO-224ENST00000496340 A0A1W2PQD8 194 aa11.77□□□□□ -0.53
NEPRO-224ENST00000496340 ARHGEF37A1IGU5 675 aa11.77□□□□□ -0.53
NEPRO-224ENST00000496340 PRR33A8MZF0 331 aa11.77□□□□□ -0.53
NEPRO-224ENST00000496340 TULP1O00294 542 aaPredicted RBP11.77□□□□□ -0.53
NEPRO-224ENST00000496340 MOSPD3O75425 235 aa11.77□□□□□ -0.53
NEPRO-224ENST00000496340 CST3P01034 146 aaPredicted RBP11.77□□□□□ -0.53
NEPRO-224ENST00000496340 ITGB3P05106 788 aa11.77□□□□□ -0.53
NEPRO-224ENST00000496340 POLR2BP30876 1174 aaKnown RBP11.77□□□□□ -0.53
NEPRO-224ENST00000496340 SYKP43405 635 aa11.77□□□□□ -0.53
NEPRO-224ENST00000496340 CASP4P49662 377 aa11.77□□□□□ -0.53
NEPRO-224ENST00000496340 TFAMQ00059 246 aaKnown RBP11.77□□□□□ -0.53
NEPRO-224ENST00000496340 POU5F1Q01860 360 aaKnown RBP11.77□□□□□ -0.53
NEPRO-224ENST00000496340 ADCY1Q08828 1119 aa11.77□□□□□ -0.53
NEPRO-224ENST00000496340 DPYDQ12882 1025 aa11.77□□□□□ -0.53
NEPRO-224ENST00000496340 SNW1Q13573 536 aaKnown RBP11.77□□□□□ -0.53
NEPRO-224ENST00000496340 ALCAMQ13740 583 aa11.77□□□□□ -0.53
NEPRO-224ENST00000496340 PPM1LQ5SGD2 360 aa11.77□□□□□ -0.53
NEPRO-224ENST00000496340 WSCD1Q658N2 575 aa11.77□□□□□ -0.53
NEPRO-224ENST00000496340 PDXDC1Q6P996 788 aa11.77□□□□□ -0.53
NEPRO-224ENST00000496340 DSTYKQ6XUX3 929 aa11.77□□□□□ -0.53
NEPRO-224ENST00000496340 HS6ST3Q8IZP7 471 aa11.77□□□□□ -0.53
NEPRO-224ENST00000496340 GPD1LQ8N335 351 aa11.77□□□□□ -0.53
NEPRO-224ENST00000496340 ATAD1Q8NBU5 361 aa11.77□□□□□ -0.53
NEPRO-224ENST00000496340 ENGASEQ8NFI3 743 aa11.77□□□□□ -0.53
NEPRO-224ENST00000496340 ERCC4Q92889 916 aaPredicted RBP11.77□□□□□ -0.53
NEPRO-224ENST00000496340 TCEAL4Q96EI5 215 aa11.77□□□□□ -0.53
NEPRO-224ENST00000496340 TSPAN18Q96SJ8 248 aa11.77□□□□□ -0.53
NEPRO-224ENST00000496340 MTMR12Q9C0I1 747 aa11.77□□□□□ -0.53
NEPRO-224ENST00000496340 LRRC27Q9C0I9 530 aa11.77□□□□□ -0.53
NEPRO-224ENST00000496340 DNAJC25Q9H1X3 360 aa11.77□□□□□ -0.53
NEPRO-224ENST00000496340 KCTD10Q9H3F6 313 aa11.77□□□□□ -0.53
NEPRO-224ENST00000496340 MAGEF1Q9HAY2 307 aa11.77□□□□□ -0.53
NEPRO-224ENST00000496340 TMLHEQ9NVH6 421 aa11.77□□□□□ -0.53
NEPRO-224ENST00000496340 SLC27A5Q9Y2P5 690 aa11.77□□□□□ -0.53
NEPRO-224ENST00000496340 NR2E1Q9Y466 385 aa11.77□□□□□ -0.53
NEPRO-224ENST00000496340 NME7Q9Y5B8 376 aa11.77□□□□□ -0.53
NEPRO-224ENST00000496340 DMDP11532 3685 aa11.77□□□□□ -0.53
NEPRO-224ENST00000496340 ZNF318Q5VUA4 2279 aa11.76□□□□□ -0.53
NEPRO-224ENST00000496340 TMEM221A6NGB7 291 aa11.76□□□□□ -0.53
NEPRO-224ENST00000496340 M0R296 226 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms