RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 PTPAQ15257 358 aa10.65□□□□□ -0.7
SMARCAL1-213ENST00000496037 ARHGAP29Q52LW3 1261 aa10.65□□□□□ -0.7
SMARCAL1-213ENST00000496037 USP39Q53GS9 565 aaKnown RBP10.65□□□□□ -0.7
SMARCAL1-213ENST00000496037 PRR16Q569H4 304 aa10.65□□□□□ -0.7
SMARCAL1-213ENST00000496037 ANKRD45Q5TZF3 282 aa10.65□□□□□ -0.7
SMARCAL1-213ENST00000496037 ZNF843Q8N446 348 aa10.65□□□□□ -0.7
SMARCAL1-213ENST00000496037 GSTCDQ8NEC7 633 aa10.65□□□□□ -0.7
SMARCAL1-213ENST00000496037 PSPC1Q8WXF1 523 aaKnown RBP10.65□□□□□ -0.7
SMARCAL1-213ENST00000496037 SLC7A3Q8WY07 619 aa10.65□□□□□ -0.7
SMARCAL1-213ENST00000496037 CRELD1Q96HD1 420 aa10.65□□□□□ -0.7
SMARCAL1-213ENST00000496037 CSRNP2Q9H175 543 aa10.65□□□□□ -0.7
SMARCAL1-213ENST00000496037 MINDY3Q9H8M7 445 aa10.65□□□□□ -0.7
SMARCAL1-213ENST00000496037 ASAH2Q9NR71 780 aa10.65□□□□□ -0.7
SMARCAL1-213ENST00000496037 PARP2Q9UGN5 583 aa10.65□□□□□ -0.7
SMARCAL1-213ENST00000496037 CFAP46Q8IYW2 2715 aa10.64□□□□□ -0.71
SMARCAL1-213ENST00000496037 ACACAQ13085 2346 aa10.64□□□□□ -0.71
SMARCAL1-213ENST00000496037 SMCO2A6NFE2 343 aa10.64□□□□□ -0.71
SMARCAL1-213ENST00000496037 CCDC69A6NI79 296 aa10.64□□□□□ -0.71
SMARCAL1-213ENST00000496037 TSPAN1O60635 241 aa10.64□□□□□ -0.71
SMARCAL1-213ENST00000496037 GAS7O60861 476 aa10.64□□□□□ -0.71
SMARCAL1-213ENST00000496037 CYP3A4P08684 503 aa10.64□□□□□ -0.71
SMARCAL1-213ENST00000496037 GJA1P17302 382 aa10.64□□□□□ -0.71
SMARCAL1-213ENST00000496037 RXRAP19793 462 aa10.64□□□□□ -0.71
SMARCAL1-213ENST00000496037 GCGRP47871 477 aa10.64□□□□□ -0.71
SMARCAL1-213ENST00000496037 DGKEP52429 567 aa10.64□□□□□ -0.71
SMARCAL1-213ENST00000496037 FAM193AP78312 1265 aa10.64□□□□□ -0.71
SMARCAL1-213ENST00000496037 PCBP1Q15365 356 aaKnown RBP eCLIP10.64□□□□□ -0.71
SMARCAL1-213ENST00000496037 TEAD2Q15562 447 aa10.64□□□□□ -0.71
SMARCAL1-213ENST00000496037 MAPK6Q16659 721 aa10.64□□□□□ -0.71
SMARCAL1-213ENST00000496037 JAKMIP3Q5VZ66 844 aa10.64□□□□□ -0.71
SMARCAL1-213ENST00000496037 ANKS3Q6ZW76 656 aa10.64□□□□□ -0.71
SMARCAL1-213ENST00000496037 LSM14AQ8ND56 463 aaKnown RBP10.64□□□□□ -0.71
SMARCAL1-213ENST00000496037 ADAMTS14Q8WXS8 1223 aa10.64□□□□□ -0.71
SMARCAL1-213ENST00000496037 CPB2Q96IY4 423 aa10.64□□□□□ -0.71
SMARCAL1-213ENST00000496037 ZFYVE19Q96K21 471 aa10.64□□□□□ -0.71
SMARCAL1-213ENST00000496037 ZNF512Q96ME7 567 aaPredicted RBP10.64□□□□□ -0.71
SMARCAL1-213ENST00000496037 CEP89Q96ST8 783 aa10.64□□□□□ -0.71
SMARCAL1-213ENST00000496037 CYP4F11Q9HBI6 524 aa10.64□□□□□ -0.71
SMARCAL1-213ENST00000496037 SNTG2Q9NY99 539 aa10.64□□□□□ -0.71
SMARCAL1-213ENST00000496037 KLK14Q9P0G3 267 aa10.64□□□□□ -0.71
SMARCAL1-213ENST00000496037 EBF1Q9UH73 591 aa10.64□□□□□ -0.71
SMARCAL1-213ENST00000496037 INVSQ9Y283 1065 aa10.64□□□□□ -0.71
SMARCAL1-213ENST00000496037 INSL5Q9Y5Q6 135 aa10.64□□□□□ -0.71
SMARCAL1-213ENST00000496037 BACE2Q9Y5Z0 518 aa10.64□□□□□ -0.71
SMARCAL1-213ENST00000496037 MYO18BQ8IUG5 2567 aa10.64□□□□□ -0.71
SMARCAL1-213ENST00000496037 APC2O95996 2303 aa10.63□□□□□ -0.71
SMARCAL1-213ENST00000496037 EML5Q05BV3 1969 aa10.63□□□□□ -0.71
SMARCAL1-213ENST00000496037 A0A087WV48 116 aa10.63□□□□□ -0.71
SMARCAL1-213ENST00000496037 OPHN1O60890 802 aa10.63□□□□□ -0.71
SMARCAL1-213ENST00000496037 FGFR3P22607 806 aa10.63□□□□□ -0.71
SMARCAL1-213ENST00000496037 ROR1Q01973 937 aa10.63□□□□□ -0.71
SMARCAL1-213ENST00000496037 ITPRIPL2Q3MIP1 535 aa10.63□□□□□ -0.71
SMARCAL1-213ENST00000496037 CASC1Q6TDU7 716 aa10.63□□□□□ -0.71
SMARCAL1-213ENST00000496037 TMTC3Q6ZXV5 915 aa10.63□□□□□ -0.71
SMARCAL1-213ENST00000496037 SCUBE3Q8IX30 993 aa10.63□□□□□ -0.71
SMARCAL1-213ENST00000496037 RNF149Q8NC42 400 aa10.63□□□□□ -0.71
SMARCAL1-213ENST00000496037 ZNF461Q8TAF7 563 aa10.63□□□□□ -0.71
SMARCAL1-213ENST00000496037 IGDCC4Q8TDY8 1250 aa10.63□□□□□ -0.71
SMARCAL1-213ENST00000496037 PRPF31Q8WWY3 499 aaKnown RBP10.63□□□□□ -0.71
SMARCAL1-213ENST00000496037 ACDQ96AP0 544 aa10.63□□□□□ -0.71
SMARCAL1-213ENST00000496037 RSPRY1Q96DX4 576 aa10.63□□□□□ -0.71
SMARCAL1-213ENST00000496037 GTPBP2Q9BX10 602 aaKnown RBP10.63□□□□□ -0.71
SMARCAL1-213ENST00000496037 TEKT3Q9BXF9 490 aa10.63□□□□□ -0.71
SMARCAL1-213ENST00000496037 DKK4Q9UBT3 224 aa10.63□□□□□ -0.71
SMARCAL1-213ENST00000496037 PCDHB9Q9Y5E1 797 aa10.63□□□□□ -0.71
SMARCAL1-213ENST00000496037 ASCC3Q8N3C0 2202 aaKnown RBP10.63□□□□□ -0.71
SMARCAL1-213ENST00000496037 CACNA1EQ15878 2313 aa10.63□□□□□ -0.71
SMARCAL1-213ENST00000496037 hCG_1984214I3L0E3 225 aa10.62□□□□□ -0.71
SMARCAL1-213ENST00000496037 MOSPD3O75425 235 aa10.62□□□□□ -0.71
SMARCAL1-213ENST00000496037 CFIP05156 583 aa10.62□□□□□ -0.71
SMARCAL1-213ENST00000496037 PRKCBP05771 671 aa10.62□□□□□ -0.71
SMARCAL1-213ENST00000496037 FTH1P19P0C7X4 201 aa10.62□□□□□ -0.71
SMARCAL1-213ENST00000496037 ATF2P15336 505 aa10.62□□□□□ -0.71
SMARCAL1-213ENST00000496037 DPP6P42658 865 aa10.62□□□□□ -0.71
SMARCAL1-213ENST00000496037 ARPP19P56211 112 aa10.62□□□□□ -0.71
SMARCAL1-213ENST00000496037 HNRNPUQ00839 825 aaKnown RBP eCLIP10.62□□□□□ -0.71
SMARCAL1-213ENST00000496037 TNK2Q07912 1038 aa10.62□□□□□ -0.71
SMARCAL1-213ENST00000496037 LAMTOR4Q0VGL1 99 aa10.62□□□□□ -0.71
SMARCAL1-213ENST00000496037 TRIP6Q15654 476 aaKnown RBP10.62□□□□□ -0.71
SMARCAL1-213ENST00000496037 TMEM196Q5HYL7 178 aa10.62□□□□□ -0.71
SMARCAL1-213ENST00000496037 C20orf194Q5TEA3 1177 aa10.62□□□□□ -0.71
SMARCAL1-213ENST00000496037 LRCH2Q5VUJ6 765 aa10.62□□□□□ -0.71
SMARCAL1-213ENST00000496037 FSTL4Q6MZW2 842 aa10.62□□□□□ -0.71
SMARCAL1-213ENST00000496037 SYT13Q7L8C5 426 aa10.62□□□□□ -0.71
SMARCAL1-213ENST00000496037 MIER3Q7Z3K6 550 aa10.62□□□□□ -0.71
SMARCAL1-213ENST00000496037 PLEKHM2Q8IWE5 1019 aa10.62□□□□□ -0.71
SMARCAL1-213ENST00000496037 EXOC8Q8IYI6 725 aa10.62□□□□□ -0.71
SMARCAL1-213ENST00000496037 TCEAL8Q8IYN2 117 aa10.62□□□□□ -0.71
SMARCAL1-213ENST00000496037 ZNF713Q8N859 430 aaPredicted RBP10.62□□□□□ -0.71
SMARCAL1-213ENST00000496037 TSTD1Q8NFU3 115 aa10.62□□□□□ -0.71
SMARCAL1-213ENST00000496037 RDM1Q8NG50 284 aa10.62□□□□□ -0.71
SMARCAL1-213ENST00000496037 PIP4K2CQ8TBX8 421 aa10.62□□□□□ -0.71
SMARCAL1-213ENST00000496037 TMEM143Q96AN5 459 aa10.62□□□□□ -0.71
SMARCAL1-213ENST00000496037 RIT2Q99578 217 aa10.62□□□□□ -0.71
SMARCAL1-213ENST00000496037 UNC45AQ9H3U1 944 aa10.62□□□□□ -0.71
SMARCAL1-213ENST00000496037 POLR3BQ9NW08 1133 aaPredicted RBP10.62□□□□□ -0.71
SMARCAL1-213ENST00000496037 BCCIPQ9P287 314 aaKnown RBP eCLIP10.62□□□□□ -0.71
SMARCAL1-213ENST00000496037 NUP205Q92621 2012 aa10.62□□□□□ -0.71
SMARCAL1-213ENST00000496037 VWA8A3KMH1 1905 aa10.61□□□□□ -0.71
SMARCAL1-213ENST00000496037 E7EWF7 191 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms