RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 KIAA0391O15091 583 aaKnown RBP5.6□□□□□ -1.51
SMC4-224ENST00000494612 SBK3P0C264 359 aa5.6□□□□□ -1.51
SMC4-224ENST00000494612 IL2RBP14784 551 aa5.6□□□□□ -1.51
SMC4-224ENST00000494612 MALP21145 153 aa5.6□□□□□ -1.51
SMC4-224ENST00000494612 GUCY1A2P33402 732 aa5.6□□□□□ -1.51
SMC4-224ENST00000494612 ZEB1P37275 1124 aaPredicted RBP5.6□□□□□ -1.51
SMC4-224ENST00000494612 PHKA1P46020 1223 aa5.6□□□□□ -1.51
SMC4-224ENST00000494612 CLK3P49761 638 aaKnown RBP5.6□□□□□ -1.51
SMC4-224ENST00000494612 ATP8B2P98198 1209 aa5.6□□□□□ -1.51
SMC4-224ENST00000494612 MTM1Q13496 603 aa5.6□□□□□ -1.51
SMC4-224ENST00000494612 KIAA0753Q2KHM9 967 aa5.6□□□□□ -1.51
SMC4-224ENST00000494612 STRIP1Q5VSL9 837 aa5.6□□□□□ -1.51
SMC4-224ENST00000494612 Q6YL49 198 aa5.6□□□□□ -1.51
SMC4-224ENST00000494612 DOK3Q7L591 496 aa5.6□□□□□ -1.51
SMC4-224ENST00000494612 GPRIN1Q7Z2K8 1008 aa5.6□□□□□ -1.51
SMC4-224ENST00000494612 UBE3BQ7Z3V4 1068 aa5.6□□□□□ -1.51
SMC4-224ENST00000494612 CYFIP2Q96F07 1278 aa5.6□□□□□ -1.51
SMC4-224ENST00000494612 PHACTR3Q96KR7 559 aa5.6□□□□□ -1.51
SMC4-224ENST00000494612 FAM193BQ96PV7 902 aaPredicted RBP5.6□□□□□ -1.51
SMC4-224ENST00000494612 MRI1Q9BV20 369 aa5.6□□□□□ -1.51
SMC4-224ENST00000494612 APOL5Q9BWW9 433 aa5.6□□□□□ -1.51
SMC4-224ENST00000494612 SERHL2Q9H4I8 314 aa5.6□□□□□ -1.51
SMC4-224ENST00000494612 ARNT2Q9HBZ2 717 aa5.6□□□□□ -1.51
SMC4-224ENST00000494612 SPON1Q9HCB6 807 aa5.6□□□□□ -1.51
SMC4-224ENST00000494612 MAN1C1Q9NR34 630 aa5.6□□□□□ -1.51
SMC4-224ENST00000494612 ATRNL1Q5VV63 1379 aa5.59□□□□□ -1.51
SMC4-224ENST00000494612 CXorf49A8MYA2 514 aaPredicted RBP5.59□□□□□ -1.51
SMC4-224ENST00000494612 TPP1O14773 563 aa5.59□□□□□ -1.51
SMC4-224ENST00000494612 SGTAO43765 313 aa5.59□□□□□ -1.51
SMC4-224ENST00000494612 LPXNO60711 386 aa5.59□□□□□ -1.51
SMC4-224ENST00000494612 MYL1P05976 194 aa5.59□□□□□ -1.51
SMC4-224ENST00000494612 MYL3P08590 195 aa5.59□□□□□ -1.51
SMC4-224ENST00000494612 ALOX15P16050 662 aaPredicted RBP5.59□□□□□ -1.51
SMC4-224ENST00000494612 ZNF37AP17032 561 aaPredicted RBP5.59□□□□□ -1.51
SMC4-224ENST00000494612 APOBEC3AP31941 199 aaPredicted RBP5.59□□□□□ -1.51
SMC4-224ENST00000494612 HK3P52790 923 aa5.59□□□□□ -1.51
SMC4-224ENST00000494612 CREMQ03060 361 aa5.59□□□□□ -1.51
SMC4-224ENST00000494612 TLE1Q04724 770 aa5.59□□□□□ -1.51
SMC4-224ENST00000494612 FLYWCH1Q4VC44 716 aa5.59□□□□□ -1.51
SMC4-224ENST00000494612 FAM47AQ5JRC9 791 aa5.59□□□□□ -1.51
SMC4-224ENST00000494612 COLEC12Q5KU26 742 aa5.59□□□□□ -1.51
SMC4-224ENST00000494612 SYCP2LQ5T4T6 812 aa5.59□□□□□ -1.51
SMC4-224ENST00000494612 THEMIS2Q5TEJ8 643 aa5.59□□□□□ -1.51
SMC4-224ENST00000494612 IL31Q6EBC2 164 aa5.59□□□□□ -1.51
SMC4-224ENST00000494612 ZNF572Q7Z3I7 529 aaPredicted RBP5.59□□□□□ -1.51
SMC4-224ENST00000494612 ADGRG3Q86Y34 549 aa5.59□□□□□ -1.51
SMC4-224ENST00000494612 CELF5Q8N6W0 485 aaKnown RBP5.59□□□□□ -1.51
SMC4-224ENST00000494612 DCBLD1Q8N8Z6 715 aa5.59□□□□□ -1.51
SMC4-224ENST00000494612 RNF169Q8NCN4 708 aa5.59□□□□□ -1.51
SMC4-224ENST00000494612 SLC35A4Q96G79 324 aa5.59□□□□□ -1.51
SMC4-224ENST00000494612 CDK5RAP3Q96JB5 506 aa5.59□□□□□ -1.51
SMC4-224ENST00000494612 FAM204AQ9H8W3 233 aa5.59□□□□□ -1.51
SMC4-224ENST00000494612 CHST12Q9NRB3 414 aa5.59□□□□□ -1.51
SMC4-224ENST00000494612 PNPOQ9NVS9 261 aa5.59□□□□□ -1.51
SMC4-224ENST00000494612 SYBUQ9NX95 663 aa5.59□□□□□ -1.51
SMC4-224ENST00000494612 MOCS1Q9NZB8 636 aa5.59□□□□□ -1.51
SMC4-224ENST00000494612 EIF2B4Q9UI10 523 aaKnown RBP5.59□□□□□ -1.51
SMC4-224ENST00000494612 PCDHA6Q9UN73 950 aa5.59□□□□□ -1.51
SMC4-224ENST00000494612 HDAC5Q9UQL6 1122 aa5.59□□□□□ -1.51
SMC4-224ENST00000494612 CHST2Q9Y4C5 530 aa5.59□□□□□ -1.51
SMC4-224ENST00000494612 CFAP69A5D8W1 941 aa5.58□□□□□ -1.52
SMC4-224ENST00000494612 CD1AP06126 327 aa5.58□□□□□ -1.52
SMC4-224ENST00000494612 ATP5JP18859 108 aa5.58□□□□□ -1.52
SMC4-224ENST00000494612 CTXN1P60606 82 aa5.58□□□□□ -1.52
SMC4-224ENST00000494612 SP140Q13342 867 aa5.58□□□□□ -1.52
SMC4-224ENST00000494612 PLS1Q14651 629 aa5.58□□□□□ -1.52
SMC4-224ENST00000494612 RAB39AQ14964 217 aa5.58□□□□□ -1.52
SMC4-224ENST00000494612 ZNF529Q6P280 563 aa5.58□□□□□ -1.52
SMC4-224ENST00000494612 ARHGEF19Q8IW93 802 aa5.58□□□□□ -1.52
SMC4-224ENST00000494612 C1orf43Q9BWL3 253 aa5.58□□□□□ -1.52
SMC4-224ENST00000494612 CYP4F11Q9HBI6 524 aa5.58□□□□□ -1.52
SMC4-224ENST00000494612 SLC23A1Q9UHI7 598 aa5.58□□□□□ -1.52
SMC4-224ENST00000494612 POLHQ9Y253 713 aa5.58□□□□□ -1.52
SMC4-224ENST00000494612 CAPN8A6NHC0 703 aa5.57□□□□□ -1.52
SMC4-224ENST00000494612 INO80B-WBP1J3KQ70 363 aa5.57□□□□□ -1.52
SMC4-224ENST00000494612 LEFTY2O00292 366 aa5.57□□□□□ -1.52
SMC4-224ENST00000494612 KIAA0355O15063 1070 aa5.57□□□□□ -1.52
SMC4-224ENST00000494612 GRM6O15303 877 aa5.57□□□□□ -1.52
SMC4-224ENST00000494612 PQBP1O60828 265 aaKnown RBP5.57□□□□□ -1.52
SMC4-224ENST00000494612 AHSGP02765 367 aa5.57□□□□□ -1.52
SMC4-224ENST00000494612 NBPF7P0C2Y1 421 aaPredicted RBP5.57□□□□□ -1.52
SMC4-224ENST00000494612 KITP10721 976 aa5.57□□□□□ -1.52
SMC4-224ENST00000494612 TYRP14679 529 aa5.57□□□□□ -1.52
SMC4-224ENST00000494612 RHCEP18577 417 aa5.57□□□□□ -1.52
SMC4-224ENST00000494612 FLT3LGP49771 235 aa5.57□□□□□ -1.52
SMC4-224ENST00000494612 NEK3P51956 506 aa5.57□□□□□ -1.52
SMC4-224ENST00000494612 RAB1AP62820 205 aa5.57□□□□□ -1.52
SMC4-224ENST00000494612 RHDQ02161 417 aa5.57□□□□□ -1.52
SMC4-224ENST00000494612 CNN3Q15417 329 aaKnown RBP5.57□□□□□ -1.52
SMC4-224ENST00000494612 ANO6Q4KMQ2 910 aa5.57□□□□□ -1.52
SMC4-224ENST00000494612 GJC2Q5T442 439 aaPredicted RBP5.57□□□□□ -1.52
SMC4-224ENST00000494612 SWSAP1Q6NVH7 229 aa5.57□□□□□ -1.52
SMC4-224ENST00000494612 PARD3BQ8TEW8 1205 aa5.57□□□□□ -1.52
SMC4-224ENST00000494612 TNPO1Q92973 898 aaKnown RBP5.57□□□□□ -1.52
SMC4-224ENST00000494612 DCLRE1CQ96SD1 692 aaKnown RBP5.57□□□□□ -1.52
SMC4-224ENST00000494612 SARGQ9BW04 601 aa5.57□□□□□ -1.52
SMC4-224ENST00000494612 WDR11Q9BZH6 1224 aa5.57□□□□□ -1.52
SMC4-224ENST00000494612 INO80BQ9C086 356 aaPredicted RBP5.57□□□□□ -1.52
SMC4-224ENST00000494612 C11orf54Q9H0W9 315 aaPredicted RBP5.57□□□□□ -1.52
SMC4-224ENST00000494612 TMEM60Q9H2L4 133 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms