RNA–Protein interactions for RNA: ENST00000494569.5

ZIC4-216, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 3,317 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-216ENST00000494569 ALG6Q9Y672 507 aa11.76□□□□□ -0.53
ZIC4-216ENST00000494569 NFS1Q9Y697 457 aa11.76□□□□□ -0.53
ZIC4-216ENST00000494569 MBLAC1A4D2B0 266 aaPredicted RBP11.75□□□□□ -0.53
ZIC4-216ENST00000494569 BPIFB4P59827 614 aa11.75□□□□□ -0.53
ZIC4-216ENST00000494569 MAP2K5Q13163 448 aa11.75□□□□□ -0.53
ZIC4-216ENST00000494569 WDR44Q5JSH3 913 aa11.75□□□□□ -0.53
ZIC4-216ENST00000494569 OLFML2BQ68BL8 750 aa11.75□□□□□ -0.53
ZIC4-216ENST00000494569 KIAA0319LQ8IZA0 1049 aa11.75□□□□□ -0.53
ZIC4-216ENST00000494569 C1orf131Q8NDD1 294 aaKnown RBP11.75□□□□□ -0.53
ZIC4-216ENST00000494569 RIN2Q8WYP3 895 aaPredicted RBP11.75□□□□□ -0.53
ZIC4-216ENST00000494569 ALG3Q92685 438 aa11.75□□□□□ -0.53
ZIC4-216ENST00000494569 ZSWIM1Q9BR11 485 aa11.75□□□□□ -0.53
ZIC4-216ENST00000494569 BCO2Q9BYV7 579 aa11.75□□□□□ -0.53
ZIC4-216ENST00000494569 STIM2Q9P246 746 aa11.75□□□□□ -0.53
ZIC4-216ENST00000494569 SIX4Q9UIU6 781 aa11.75□□□□□ -0.53
ZIC4-216ENST00000494569 NOC2LQ9Y3T9 749 aaKnown RBP11.75□□□□□ -0.53
ZIC4-216ENST00000494569 MROH7Q68CQ1 1323 aa11.75□□□□□ -0.53
ZIC4-216ENST00000494569 PATJQ8NI35 1801 aa11.75□□□□□ -0.53
ZIC4-216ENST00000494569 H3BRB1 525 aa11.75□□□□□ -0.53
ZIC4-216ENST00000494569 IL18RAPO95256 599 aa11.75□□□□□ -0.53
ZIC4-216ENST00000494569 F2P00734 622 aa11.75□□□□□ -0.53
ZIC4-216ENST00000494569 CDH5P33151 784 aaPredicted RBP11.75□□□□□ -0.53
ZIC4-216ENST00000494569 CTNNA1P35221 906 aaKnown RBP11.75□□□□□ -0.53
ZIC4-216ENST00000494569 NOMO3P69849 1222 aa11.75□□□□□ -0.53
ZIC4-216ENST00000494569 ZBTB33Q86T24 672 aa11.75□□□□□ -0.53
ZIC4-216ENST00000494569 PHF13Q86YI8 300 aaPredicted RBP11.75□□□□□ -0.53
ZIC4-216ENST00000494569 TUT1Q9H6E5 874 aaKnown RBP11.75□□□□□ -0.53
ZIC4-216ENST00000494569 IVNS1ABPQ9Y6Y0 642 aa11.75□□□□□ -0.53
ZIC4-216ENST00000494569 TRIP11Q15643 1979 aa11.75□□□□□ -0.53
ZIC4-216ENST00000494569 SHOX2O60902 331 aaPredicted RBP11.75□□□□□ -0.53
ZIC4-216ENST00000494569 GPR32O75388 356 aa11.75□□□□□ -0.53
ZIC4-216ENST00000494569 PHKA2P46019 1235 aa11.75□□□□□ -0.53
ZIC4-216ENST00000494569 MRPS25P82663 173 aaKnown RBP11.75□□□□□ -0.53
ZIC4-216ENST00000494569 HIC1Q14526 733 aa11.75□□□□□ -0.53
ZIC4-216ENST00000494569 TSEN2Q8NCE0 465 aaKnown RBP11.75□□□□□ -0.53
ZIC4-216ENST00000494569 MTMR12Q9C0I1 747 aa11.75□□□□□ -0.53
ZIC4-216ENST00000494569 ZFYVE28Q9HCC9 887 aa11.75□□□□□ -0.53
ZIC4-216ENST00000494569 A0A087WZ62 844 aa11.74□□□□□ -0.53
ZIC4-216ENST00000494569 MIF4GDA9UHW6 222 aaKnown RBP11.74□□□□□ -0.53
ZIC4-216ENST00000494569 PGRMC1O00264 195 aaKnown RBP11.74□□□□□ -0.53
ZIC4-216ENST00000494569 TSPAN1O60635 241 aa11.74□□□□□ -0.53
ZIC4-216ENST00000494569 RPS6KA5O75582 802 aa11.74□□□□□ -0.53
ZIC4-216ENST00000494569 MYBL1P10243 752 aa11.74□□□□□ -0.53
ZIC4-216ENST00000494569 GRIK4Q16099 956 aa11.74□□□□□ -0.53
ZIC4-216ENST00000494569 CYP1B1Q16678 543 aa11.74□□□□□ -0.53
ZIC4-216ENST00000494569 CCDC181Q5TID7 509 aa11.74□□□□□ -0.53
ZIC4-216ENST00000494569 TRIM72Q6ZMU5 477 aa11.74□□□□□ -0.53
ZIC4-216ENST00000494569 ZNF410Q86VK4 478 aa11.74□□□□□ -0.53
ZIC4-216ENST00000494569 CD302Q8IX05 232 aa11.74□□□□□ -0.53
ZIC4-216ENST00000494569 VCPIP1Q96JH7 1222 aa11.74□□□□□ -0.53
ZIC4-216ENST00000494569 FDXACB1Q9BRP7 624 aaPredicted RBP11.74□□□□□ -0.53
ZIC4-216ENST00000494569 SELENOOQ9BVL4 669 aa11.74□□□□□ -0.53
ZIC4-216ENST00000494569 STAU1O95793 577 aaKnown RBP11.74□□□□□ -0.53
ZIC4-216ENST00000494569 DUOXA2Q1HG44 320 aa11.74□□□□□ -0.53
ZIC4-216ENST00000494569 SGSM1Q2NKQ1 1148 aa11.74□□□□□ -0.53
ZIC4-216ENST00000494569 DPP9Q86TI2 863 aa11.74□□□□□ -0.53
ZIC4-216ENST00000494569 IQCKQ8N0W5 287 aa11.74□□□□□ -0.53
ZIC4-216ENST00000494569 TAF4BQ92750 862 aa11.74□□□□□ -0.53
ZIC4-216ENST00000494569 NLRP4Q96MN2 994 aa11.74□□□□□ -0.53
ZIC4-216ENST00000494569 Q9Y3F1 56 aa11.74□□□□□ -0.53
ZIC4-216ENST00000494569 A0A1B0GUA9 196 aa11.73□□□□□ -0.53
ZIC4-216ENST00000494569 CCDC188H7C350 402 aa11.73□□□□□ -0.53
ZIC4-216ENST00000494569 MYL6P60660 151 aa11.73□□□□□ -0.53
ZIC4-216ENST00000494569 TRADDQ15628 312 aa11.73□□□□□ -0.53
ZIC4-216ENST00000494569 DGKDQ16760 1214 aa11.73□□□□□ -0.53
ZIC4-216ENST00000494569 OTUD6BQ8N6M0 293 aa11.73□□□□□ -0.53
ZIC4-216ENST00000494569 RBBP8NLQ8NC74 664 aaPredicted RBP11.73□□□□□ -0.53
ZIC4-216ENST00000494569 OR6J1Q8NGC5 347 aa11.73□□□□□ -0.53
ZIC4-216ENST00000494569 CASKIN2Q8WXE0 1202 aa11.73□□□□□ -0.53
ZIC4-216ENST00000494569 NUP85Q9BW27 656 aa11.73□□□□□ -0.53
ZIC4-216ENST00000494569 EPB41L4BQ9H329 900 aa11.73□□□□□ -0.53
ZIC4-216ENST00000494569 PCDHGC3Q9UN70 934 aa11.73□□□□□ -0.53
ZIC4-216ENST00000494569 NR2E1Q9Y466 385 aa11.73□□□□□ -0.53
ZIC4-216ENST00000494569 ATMINO43313 823 aaPredicted RBP11.73□□□□□ -0.53
ZIC4-216ENST00000494569 ARF4P18085 180 aaPredicted RBP11.73□□□□□ -0.53
ZIC4-216ENST00000494569 CAP1Q01518 475 aa11.73□□□□□ -0.53
ZIC4-216ENST00000494569 CPNE8Q86YQ8 564 aa11.73□□□□□ -0.53
ZIC4-216ENST00000494569 ZNF564Q8TBZ8 553 aaPredicted RBP11.73□□□□□ -0.53
ZIC4-216ENST00000494569 WNT8AQ9H1J5 351 aa11.73□□□□□ -0.53
ZIC4-216ENST00000494569 CPA4Q9UI42 421 aa11.73□□□□□ -0.53
ZIC4-216ENST00000494569 PTCH2Q9Y6C5 1203 aa11.73□□□□□ -0.53
ZIC4-216ENST00000494569 CITO14578 2027 aa11.73□□□□□ -0.53
ZIC4-216ENST00000494569 RAD51CO43502 376 aa11.73□□□□□ -0.53
ZIC4-216ENST00000494569 USP8P40818 1118 aa11.73□□□□□ -0.53
ZIC4-216ENST00000494569 NKX3-2P78367 333 aa11.73□□□□□ -0.53
ZIC4-216ENST00000494569 BIRC3Q13489 604 aa11.73□□□□□ -0.53
ZIC4-216ENST00000494569 KYAT1Q16773 422 aa11.73□□□□□ -0.53
ZIC4-216ENST00000494569 PLEKHA7Q6IQ23 1121 aa11.73□□□□□ -0.53
ZIC4-216ENST00000494569 KRT35Q92764 455 aa11.73□□□□□ -0.53
ZIC4-216ENST00000494569 NIF3L1Q9GZT8 377 aa11.73□□□□□ -0.53
ZIC4-216ENST00000494569 NEUROG2Q9H2A3 272 aa11.73□□□□□ -0.53
ZIC4-216ENST00000494569 FRMPD3Q5JV73 1810 aa11.73□□□□□ -0.53
ZIC4-216ENST00000494569 ZSCAN5CA6NGD5 496 aaPredicted RBP11.72□□□□□ -0.53
ZIC4-216ENST00000494569 COMTP21964 271 aa11.72□□□□□ -0.53
ZIC4-216ENST00000494569 CTGFP29279 349 aa11.72□□□□□ -0.53
ZIC4-216ENST00000494569 PTGIRP43119 386 aa11.72□□□□□ -0.53
ZIC4-216ENST00000494569 MARCKSL1P49006 195 aa11.72□□□□□ -0.53
ZIC4-216ENST00000494569 SLC7A5Q01650 507 aa11.72□□□□□ -0.53
ZIC4-216ENST00000494569 TNFAIP2Q03169 654 aa11.72□□□□□ -0.53
ZIC4-216ENST00000494569 SLC10A6Q3KNW5 377 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms