RNA–Protein interactions for RNA: ENST00000494284.6

PHF3-205, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-205ENST00000494284 NCOA4Q13772 614 aa13.2□□□□□ -0.3
PHF3-205ENST00000494284 PSMD6Q15008 389 aa13.2□□□□□ -0.3
PHF3-205ENST00000494284 KYNUQ16719 465 aa13.2□□□□□ -0.3
PHF3-205ENST00000494284 TMEM132AQ24JP5 1023 aa13.2□□□□□ -0.3
PHF3-205ENST00000494284 WDR44Q5JSH3 913 aa13.2□□□□□ -0.3
PHF3-205ENST00000494284 XRRA1Q6P2D8 792 aa13.2□□□□□ -0.3
PHF3-205ENST00000494284 RIOX2Q8IUF8 465 aa13.2□□□□□ -0.3
PHF3-205ENST00000494284 ARFGAP2Q8N6H7 521 aa13.2□□□□□ -0.3
PHF3-205ENST00000494284 RBBP8NLQ8NC74 664 aaPredicted RBP13.2□□□□□ -0.3
PHF3-205ENST00000494284 SEC14L1Q92503 715 aa13.2□□□□□ -0.3
PHF3-205ENST00000494284 UPF1Q92900 1129 aaKnown RBP eCLIP13.2□□□□□ -0.3
PHF3-205ENST00000494284 THOC1Q96FV9 657 aaKnown RBP13.2□□□□□ -0.3
PHF3-205ENST00000494284 CDHR1Q96JP9 859 aa13.2□□□□□ -0.3
PHF3-205ENST00000494284 SPATA33Q96N06 139 aa13.2□□□□□ -0.3
PHF3-205ENST00000494284 TTC7AQ9ULT0 858 aaPredicted RBP13.2□□□□□ -0.3
PHF3-205ENST00000494284 GINS2Q9Y248 185 aa13.2□□□□□ -0.3
PHF3-205ENST00000494284 MSCO60682 206 aa13.2□□□□□ -0.3
PHF3-205ENST00000494284 KRT19P08727 400 aa13.2□□□□□ -0.3
PHF3-205ENST00000494284 RFX1P22670 979 aa13.2□□□□□ -0.3
PHF3-205ENST00000494284 CHRNA3P32297 505 aa13.2□□□□□ -0.3
PHF3-205ENST00000494284 GTF2H1P32780 548 aa13.2□□□□□ -0.3
PHF3-205ENST00000494284 TMEM62Q0P6H9 643 aa13.2□□□□□ -0.3
PHF3-205ENST00000494284 TARBP2Q15633 366 aaKnown RBP13.2□□□□□ -0.3
PHF3-205ENST00000494284 SH3D19Q5HYK7 790 aa13.2□□□□□ -0.3
PHF3-205ENST00000494284 C11orf63Q6NUN7 778 aa13.2□□□□□ -0.3
PHF3-205ENST00000494284 GDAP1Q8TB36 358 aa13.2□□□□□ -0.3
PHF3-205ENST00000494284 CPB2Q96IY4 423 aa13.2□□□□□ -0.3
PHF3-205ENST00000494284 SEC16BQ96JE7 1060 aa13.2□□□□□ -0.3
PHF3-205ENST00000494284 GPR20Q99678 358 aa13.2□□□□□ -0.3
PHF3-205ENST00000494284 GTF3C4Q9UKN8 822 aa13.2□□□□□ -0.3
PHF3-205ENST00000494284 ADGRA2Q96PE1 1338 aa13.19□□□□□ -0.3
PHF3-205ENST00000494284 MAPK13O15264 365 aa13.19□□□□□ -0.3
PHF3-205ENST00000494284 ECEL1O95672 775 aa13.19□□□□□ -0.3
PHF3-205ENST00000494284 RALAP11233 206 aa13.19□□□□□ -0.3
PHF3-205ENST00000494284 GZMAP12544 262 aa13.19□□□□□ -0.3
PHF3-205ENST00000494284 NAMPTP43490 491 aa13.19□□□□□ -0.3
PHF3-205ENST00000494284 MNAT1P51948 309 aa13.19□□□□□ -0.3
PHF3-205ENST00000494284 CALCOCO2Q13137 446 aa13.19□□□□□ -0.3
PHF3-205ENST00000494284 ZKSCAN8Q15776 578 aaPredicted RBP13.19□□□□□ -0.3
PHF3-205ENST00000494284 NOL9Q5SY16 702 aaKnown RBP13.19□□□□□ -0.3
PHF3-205ENST00000494284 KCNV1Q6PIU1 500 aa13.19□□□□□ -0.3
PHF3-205ENST00000494284 GLIS1Q8NBF1 620 aa13.19□□□□□ -0.3
PHF3-205ENST00000494284 C1orf131Q8NDD1 294 aaKnown RBP13.19□□□□□ -0.3
PHF3-205ENST00000494284 CHST13Q8NET6 341 aa13.19□□□□□ -0.3
PHF3-205ENST00000494284 TFAP2BQ92481 460 aa13.19□□□□□ -0.3
PHF3-205ENST00000494284 CDCA5Q96FF9 252 aa13.19□□□□□ -0.3
PHF3-205ENST00000494284 C9orf72Q96LT7 481 aa13.19□□□□□ -0.3
PHF3-205ENST00000494284 OSBPL7Q9BZF2 842 aa13.19□□□□□ -0.3
PHF3-205ENST00000494284 KCNK9Q9NPC2 374 aa13.19□□□□□ -0.3
PHF3-205ENST00000494284 SAE1Q9UBE0 346 aaPredicted RBP13.19□□□□□ -0.3
PHF3-205ENST00000494284 HMGXB4Q9UGU5 601 aa13.19□□□□□ -0.3
PHF3-205ENST00000494284 MTUS1Q9ULD2 1270 aa13.19□□□□□ -0.3
PHF3-205ENST00000494284 PPP2R3BQ9Y5P8 575 aa13.19□□□□□ -0.3
PHF3-205ENST00000494284 IGKV6D-21A0A0A0MT36 114 aa13.19□□□□□ -0.3
PHF3-205ENST00000494284 MIF4GDA9UHW6 222 aaKnown RBP13.19□□□□□ -0.3
PHF3-205ENST00000494284 BHMG1C9JSJ3 638 aaPredicted RBP13.19□□□□□ -0.3
PHF3-205ENST00000494284 DNM1LO00429 736 aa13.19□□□□□ -0.3
PHF3-205ENST00000494284 ADCY3O60266 1144 aa13.19□□□□□ -0.3
PHF3-205ENST00000494284 FAM189A1O60320 539 aa13.19□□□□□ -0.3
PHF3-205ENST00000494284 CXCL8P10145 99 aa13.19□□□□□ -0.3
PHF3-205ENST00000494284 ADCY8P40145 1251 aa13.19□□□□□ -0.3
PHF3-205ENST00000494284 NSFP46459 744 aaKnown RBP13.19□□□□□ -0.3
PHF3-205ENST00000494284 CYP4F22Q6NT55 531 aa13.19□□□□□ -0.3
PHF3-205ENST00000494284 DNERQ8NFT8 737 aa13.19□□□□□ -0.3
PHF3-205ENST00000494284 CDC42EP4Q9H3Q1 356 aaKnown RBP13.19□□□□□ -0.3
PHF3-205ENST00000494284 MTRF1LQ9UGC7 380 aaKnown RBP13.19□□□□□ -0.3
PHF3-205ENST00000494284 TP73O15350 636 aa13.18□□□□□ -0.3
PHF3-205ENST00000494284 RIPK2O43353 540 aa13.18□□□□□ -0.3
PHF3-205ENST00000494284 VTNP04004 478 aa13.18□□□□□ -0.3
PHF3-205ENST00000494284 ZSCAN5DPP0CG00 497 aa13.18□□□□□ -0.3
PHF3-205ENST00000494284 ATF7P17544 494 aaPredicted RBP13.18□□□□□ -0.3
PHF3-205ENST00000494284 CTNNA2P26232 953 aa13.18□□□□□ -0.3
PHF3-205ENST00000494284 HNRNPH1P31943 449 aaKnown RBP13.18□□□□□ -0.3
PHF3-205ENST00000494284 GCNT1Q02742 428 aa13.18□□□□□ -0.3
PHF3-205ENST00000494284 DHX34Q14147 1143 aaKnown RBP13.18□□□□□ -0.3
PHF3-205ENST00000494284 C9orf131Q5VYM1 1079 aa13.18□□□□□ -0.3
PHF3-205ENST00000494284 CCDC121Q6ZUS5 278 aa13.18□□□□□ -0.3
PHF3-205ENST00000494284 CCDC13Q8IYE1 715 aa13.18□□□□□ -0.3
PHF3-205ENST00000494284 SEPT1Q8WYJ6 367 aa13.18□□□□□ -0.3
PHF3-205ENST00000494284 ELAC2Q9BQ52 826 aaKnown RBP13.18□□□□□ -0.3
PHF3-205ENST00000494284 JPH2Q9BR39 696 aaPredicted RBP13.18□□□□□ -0.3
PHF3-205ENST00000494284 TXLNGYQ9BZA5 131 aa13.18□□□□□ -0.3
PHF3-205ENST00000494284 WNT8AQ9H1J5 351 aa13.18□□□□□ -0.3
PHF3-205ENST00000494284 C17orf75Q9HAS0 396 aa13.18□□□□□ -0.3
PHF3-205ENST00000494284 ADAM22Q9P0K1 906 aa13.18□□□□□ -0.3
PHF3-205ENST00000494284 PCDHA3Q9Y5H8 950 aa13.18□□□□□ -0.3
PHF3-205ENST00000494284 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.18□□□□□ -0.3
PHF3-205ENST00000494284 F8VP50 259 aa13.18□□□□□ -0.3
PHF3-205ENST00000494284 RASGRF2O14827 1237 aa13.18□□□□□ -0.3
PHF3-205ENST00000494284 GH1P01241 217 aa13.18□□□□□ -0.3
PHF3-205ENST00000494284 TXNP10599 105 aaKnown RBP13.18□□□□□ -0.3
PHF3-205ENST00000494284 ETS1P14921 441 aa13.18□□□□□ -0.3
PHF3-205ENST00000494284 ICAM3P32942 547 aa13.18□□□□□ -0.3
PHF3-205ENST00000494284 OGDHQ02218 1023 aa13.18□□□□□ -0.3
PHF3-205ENST00000494284 PLCB4Q15147 1175 aa13.18□□□□□ -0.3
PHF3-205ENST00000494284 MON1BQ7L1V2 547 aa13.18□□□□□ -0.3
PHF3-205ENST00000494284 TMEM174Q8WUU8 243 aa13.18□□□□□ -0.3
PHF3-205ENST00000494284 DYDC1Q8WWB3 177 aa13.18□□□□□ -0.3
PHF3-205ENST00000494284 A0A0G2JLL6 359 aaPredicted RBP13.18□□□□□ -0.3
PHF3-205ENST00000494284 CLTAP09496 248 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms