RNA–Protein interactions for RNA: ENST00000494012.1

MACF1-222, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 4

Gene MACF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-222ENST00000494012 PCDHB8Q9UN66 801 aa10.78□□□□□ -0.68
MACF1-222ENST00000494012 PTPRJQ12913 1337 aa10.78□□□□□ -0.68
MACF1-222ENST00000494012 MTCL1Q9Y4B5 1905 aaKnown RBP10.78□□□□□ -0.68
MACF1-222ENST00000494012 VCANP13611 3396 aa10.77□□□□□ -0.68
MACF1-222ENST00000494012 KPNA7A9QM74 516 aa10.77□□□□□ -0.69
MACF1-222ENST00000494012 PPP1R3GB7ZBB8 358 aa10.77□□□□□ -0.69
MACF1-222ENST00000494012 H7C4K7 107 aa10.77□□□□□ -0.69
MACF1-222ENST00000494012 PPEF2O14830 753 aa10.77□□□□□ -0.69
MACF1-222ENST00000494012 IKBKBO14920 756 aa10.77□□□□□ -0.69
MACF1-222ENST00000494012 TEX28O15482 410 aa10.77□□□□□ -0.69
MACF1-222ENST00000494012 AKAP3O75969 853 aa10.77□□□□□ -0.69
MACF1-222ENST00000494012 GLUD1P00367 558 aa10.77□□□□□ -0.69
MACF1-222ENST00000494012 EPB41P11171 864 aaKnown RBP10.77□□□□□ -0.69
MACF1-222ENST00000494012 CD44P16070 742 aaKnown RBP10.77□□□□□ -0.69
MACF1-222ENST00000494012 VAMP7P51809 220 aa10.77□□□□□ -0.69
MACF1-222ENST00000494012 CLDN10P78369 228 aa10.77□□□□□ -0.69
MACF1-222ENST00000494012 YWHAHQ04917 246 aaPredicted RBP10.77□□□□□ -0.69
MACF1-222ENST00000494012 BFSP1Q12934 665 aa10.77□□□□□ -0.69
MACF1-222ENST00000494012 PAK1Q13153 545 aa10.77□□□□□ -0.69
MACF1-222ENST00000494012 ADAM15Q13444 863 aa10.77□□□□□ -0.69
MACF1-222ENST00000494012 VARS2Q5ST30 1063 aaKnown RBP10.77□□□□□ -0.69
MACF1-222ENST00000494012 LMBRD2Q68DH5 695 aaPredicted RBP10.77□□□□□ -0.69
MACF1-222ENST00000494012 ANKRD40Q6AI12 368 aa10.77□□□□□ -0.69
MACF1-222ENST00000494012 KLHL10Q6JEL2 608 aa10.77□□□□□ -0.69
MACF1-222ENST00000494012 ZNF280DQ6N043 979 aa10.77□□□□□ -0.69
MACF1-222ENST00000494012 PRSS55Q6UWB4 352 aaPredicted RBP10.77□□□□□ -0.69
MACF1-222ENST00000494012 TMEM184AQ6ZMB5 413 aa10.77□□□□□ -0.69
MACF1-222ENST00000494012 MLKLQ8NB16 471 aa10.77□□□□□ -0.69
MACF1-222ENST00000494012 OR5B17Q8NGF7 314 aa10.77□□□□□ -0.69
MACF1-222ENST00000494012 LNX1Q8TBB1 728 aaPredicted RBP10.77□□□□□ -0.69
MACF1-222ENST00000494012 PARD3BQ8TEW8 1205 aa10.77□□□□□ -0.69
MACF1-222ENST00000494012 NELFBQ8WX92 580 aa10.77□□□□□ -0.69
MACF1-222ENST00000494012 SYAP1Q96A49 352 aaPredicted RBP10.77□□□□□ -0.69
MACF1-222ENST00000494012 CEP63Q96MT8 703 aa10.77□□□□□ -0.69
MACF1-222ENST00000494012 DZANK1Q9NVP4 752 aa10.77□□□□□ -0.69
MACF1-222ENST00000494012 MTRRQ9UBK8 725 aa10.77□□□□□ -0.69
MACF1-222ENST00000494012 DSEQ9UL01 958 aa10.77□□□□□ -0.69
MACF1-222ENST00000494012 AGAP1Q9UPQ3 857 aa10.77□□□□□ -0.69
MACF1-222ENST00000494012 CTNND2Q9UQB3 1225 aa10.77□□□□□ -0.69
MACF1-222ENST00000494012 BACE2Q9Y5Z0 518 aa10.77□□□□□ -0.69
MACF1-222ENST00000494012 HCFC2Q9Y5Z7 792 aa10.77□□□□□ -0.69
MACF1-222ENST00000494012 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.76□□□□□ -0.69
MACF1-222ENST00000494012 TRIM49BA6NDI0 452 aa10.76□□□□□ -0.69
MACF1-222ENST00000494012 SPDYE4A6NLX3 237 aa10.76□□□□□ -0.69
MACF1-222ENST00000494012 LRRIQ3A6PVS8 624 aaPredicted RBP10.76□□□□□ -0.69
MACF1-222ENST00000494012 LINC01565O15544 149 aa10.76□□□□□ -0.69
MACF1-222ENST00000494012 STX10O60499 249 aa10.76□□□□□ -0.69
MACF1-222ENST00000494012 PHACTR2O75167 634 aa10.76□□□□□ -0.69
MACF1-222ENST00000494012 TBX10O75333 385 aa10.76□□□□□ -0.69
MACF1-222ENST00000494012 GLP2RO95838 553 aa10.76□□□□□ -0.69
MACF1-222ENST00000494012 TYMPP19971 482 aa10.76□□□□□ -0.69
MACF1-222ENST00000494012 KCNA5P22460 613 aa10.76□□□□□ -0.69
MACF1-222ENST00000494012 IGFBP6P24592 240 aaPredicted RBP10.76□□□□□ -0.69
MACF1-222ENST00000494012 GTF2F1P35269 517 aaKnown RBP eCLIP10.76□□□□□ -0.69
MACF1-222ENST00000494012 CLCN4P51793 760 aa10.76□□□□□ -0.69
MACF1-222ENST00000494012 PMS1P54277 932 aaKnown RBP10.76□□□□□ -0.69
MACF1-222ENST00000494012 BIRC3Q13489 604 aa10.76□□□□□ -0.69
MACF1-222ENST00000494012 TRPC3Q13507 836 aa10.76□□□□□ -0.69
MACF1-222ENST00000494012 KCNC3Q14003 757 aa10.76□□□□□ -0.69
MACF1-222ENST00000494012 CCDC183Q5T5S1 534 aa10.76□□□□□ -0.69
MACF1-222ENST00000494012 LLGL2Q6P1M3 1020 aa10.76□□□□□ -0.69
MACF1-222ENST00000494012 TRAPPC11Q7Z392 1133 aa10.76□□□□□ -0.69
MACF1-222ENST00000494012 METTL23Q86XA0 190 aa10.76□□□□□ -0.69
MACF1-222ENST00000494012 ZC3H3Q8IXZ2 948 aaKnown RBP10.76□□□□□ -0.69
MACF1-222ENST00000494012 ATXN2LQ8WWM7 1075 aaKnown RBP10.76□□□□□ -0.69
MACF1-222ENST00000494012 HPDLQ96IR7 371 aa10.76□□□□□ -0.69
MACF1-222ENST00000494012 SENP8Q96LD8 212 aa10.76□□□□□ -0.69
MACF1-222ENST00000494012 POP1Q99575 1024 aaKnown RBP10.76□□□□□ -0.69
MACF1-222ENST00000494012 GZF1Q9H116 711 aaPredicted RBP10.76□□□□□ -0.69
MACF1-222ENST00000494012 RWDD2AQ9UIY3 292 aa10.76□□□□□ -0.69
MACF1-222ENST00000494012 CYB561D2O14569 222 aa10.75□□□□□ -0.69
MACF1-222ENST00000494012 SPTLC1O15269 473 aa10.75□□□□□ -0.69
MACF1-222ENST00000494012 HUS1O60921 280 aa10.75□□□□□ -0.69
MACF1-222ENST00000494012 CLSTN1O94985 981 aa10.75□□□□□ -0.69
MACF1-222ENST00000494012 OAZ2O95190 189 aa10.75□□□□□ -0.69
MACF1-222ENST00000494012 FGFR1OPO95684 399 aaKnown RBP10.75□□□□□ -0.69
MACF1-222ENST00000494012 GNA14O95837 355 aa10.75□□□□□ -0.69
MACF1-222ENST00000494012 CYP11A1P05108 521 aa10.75□□□□□ -0.69
MACF1-222ENST00000494012 HOXB8P17481 243 aaPredicted RBP10.75□□□□□ -0.69
MACF1-222ENST00000494012 RPL17P18621 184 aaKnown RBP10.75□□□□□ -0.69
MACF1-222ENST00000494012 ATICP31939 592 aa10.75□□□□□ -0.69
MACF1-222ENST00000494012 DLG4P78352 724 aa10.75□□□□□ -0.69
MACF1-222ENST00000494012 MRPS5P82675 430 aaKnown RBP10.75□□□□□ -0.69
MACF1-222ENST00000494012 PUS10Q3MIT2 529 aaKnown RBP10.75□□□□□ -0.69
MACF1-222ENST00000494012 CTXN3Q4LDR2 81 aa10.75□□□□□ -0.69
MACF1-222ENST00000494012 OVOS1Q6IE37 1185 aa10.75□□□□□ -0.69
MACF1-222ENST00000494012 SLC8B1Q6J4K2 584 aa10.75□□□□□ -0.69
MACF1-222ENST00000494012 TTI2Q6NXR4 508 aa10.75□□□□□ -0.69
MACF1-222ENST00000494012 RBM43Q6ZSC3 357 aaKnown RBP10.75□□□□□ -0.69
MACF1-222ENST00000494012 TMEM130Q8N3G9 435 aa10.75□□□□□ -0.69
MACF1-222ENST00000494012 VN1R2Q8NFZ6 395 aa10.75□□□□□ -0.69
MACF1-222ENST00000494012 CXorf38Q8TB03 319 aa10.75□□□□□ -0.69
MACF1-222ENST00000494012 SPATA18Q8TC71 538 aa10.75□□□□□ -0.69
MACF1-222ENST00000494012 PLEKHO2Q8TD55 490 aa10.75□□□□□ -0.69
MACF1-222ENST00000494012 SLC22A17Q8WUG5 538 aa10.75□□□□□ -0.69
MACF1-222ENST00000494012 HDAC7Q8WUI4 952 aa10.75□□□□□ -0.69
MACF1-222ENST00000494012 EEF2KMTQ96G04 330 aa10.75□□□□□ -0.69
MACF1-222ENST00000494012 CLSTN3Q9BQT9 956 aa10.75□□□□□ -0.69
MACF1-222ENST00000494012 METTL14Q9HCE5 456 aaKnown RBP10.75□□□□□ -0.69
MACF1-222ENST00000494012 GDAP2Q9NXN4 497 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms