RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 MTMR8Q96EF0 704 aa11.44□□□□□ -0.58
PDLIM1-205ENST00000493949 CNOT6LQ96LI5 555 aaKnown RBP11.44□□□□□ -0.58
PDLIM1-205ENST00000493949 KAT14Q9H8E8 782 aa11.44□□□□□ -0.58
PDLIM1-205ENST00000493949 RIC8AQ9NPQ8 531 aa11.44□□□□□ -0.58
PDLIM1-205ENST00000493949 JADE2Q9NQC1 790 aa11.44□□□□□ -0.58
PDLIM1-205ENST00000493949 TMEM161AQ9NX61 479 aa11.44□□□□□ -0.58
PDLIM1-205ENST00000493949 SPG21Q9NZD8 308 aa11.44□□□□□ -0.58
PDLIM1-205ENST00000493949 FBXO4Q9UKT5 387 aa11.44□□□□□ -0.58
PDLIM1-205ENST00000493949 SIT1Q9Y3P8 196 aa11.44□□□□□ -0.58
PDLIM1-205ENST00000493949 PCDHGA2Q9Y5H1 932 aa11.44□□□□□ -0.58
PDLIM1-205ENST00000493949 PCDHA1Q9Y5I3 950 aa11.44□□□□□ -0.58
PDLIM1-205ENST00000493949 IRAK3Q9Y616 596 aa11.44□□□□□ -0.58
PDLIM1-205ENST00000493949 FAM169AQ9Y6X4 670 aa11.44□□□□□ -0.58
PDLIM1-205ENST00000493949 DSPP15924 2871 aaKnown RBP11.44□□□□□ -0.58
PDLIM1-205ENST00000493949 TMCO5BA8MYB1 307 aa11.43□□□□□ -0.58
PDLIM1-205ENST00000493949 M0R2N6 131 aa11.43□□□□□ -0.58
PDLIM1-205ENST00000493949 PLEKHA8P1O95397 391 aa11.43□□□□□ -0.58
PDLIM1-205ENST00000493949 GNA14O95837 355 aa11.43□□□□□ -0.58
PDLIM1-205ENST00000493949 DCNP07585 359 aaKnown RBP11.43□□□□□ -0.58
PDLIM1-205ENST00000493949 CFHP08603 1231 aa11.43□□□□□ -0.58
PDLIM1-205ENST00000493949 SRFP11831 508 aa11.43□□□□□ -0.58
PDLIM1-205ENST00000493949 GLULP15104 373 aa11.43□□□□□ -0.58
PDLIM1-205ENST00000493949 MARK3P27448 753 aa11.43□□□□□ -0.58
PDLIM1-205ENST00000493949 TCF7P36402 384 aaPredicted RBP11.43□□□□□ -0.58
PDLIM1-205ENST00000493949 MTIF2P46199 727 aaKnown RBP11.43□□□□□ -0.58
PDLIM1-205ENST00000493949 TMEM62Q0P6H9 643 aa11.43□□□□□ -0.58
PDLIM1-205ENST00000493949 NONOQ15233 471 aaKnown RBP eCLIP11.43□□□□□ -0.58
PDLIM1-205ENST00000493949 IFI16Q16666 785 aaKnown RBP11.43□□□□□ -0.58
PDLIM1-205ENST00000493949 PPM1JQ5JR12 505 aa11.43□□□□□ -0.58
PDLIM1-205ENST00000493949 CENPPQ6IPU0 288 aa11.43□□□□□ -0.58
PDLIM1-205ENST00000493949 C8orf74Q6P047 294 aa11.43□□□□□ -0.58
PDLIM1-205ENST00000493949 PIK3AP1Q6ZUJ8 805 aa11.43□□□□□ -0.58
PDLIM1-205ENST00000493949 NME8Q8N427 588 aa11.43□□□□□ -0.58
PDLIM1-205ENST00000493949 GUF1Q8N442 669 aaKnown RBP11.43□□□□□ -0.58
PDLIM1-205ENST00000493949 ZBTB44Q8NCP5 570 aa11.43□□□□□ -0.58
PDLIM1-205ENST00000493949 BCAS4Q8TDM0 211 aa11.43□□□□□ -0.58
PDLIM1-205ENST00000493949 SLC22A17Q8WUG5 538 aa11.43□□□□□ -0.58
PDLIM1-205ENST00000493949 NXPE3Q969Y0 559 aa11.43□□□□□ -0.58
PDLIM1-205ENST00000493949 ZNF558Q96NG5 402 aa11.43□□□□□ -0.58
PDLIM1-205ENST00000493949 NOX5Q96PH1 765 aa11.43□□□□□ -0.58
PDLIM1-205ENST00000493949 OSBPL9Q96SU4 736 aa11.43□□□□□ -0.58
PDLIM1-205ENST00000493949 RAB34Q9BZG1 259 aa11.43□□□□□ -0.58
PDLIM1-205ENST00000493949 TMEM117Q9H0C3 514 aa11.43□□□□□ -0.58
PDLIM1-205ENST00000493949 FAM49AQ9H0Q0 323 aaPredicted RBP11.43□□□□□ -0.58
PDLIM1-205ENST00000493949 ACTR5Q9H9F9 607 aaPredicted RBP11.43□□□□□ -0.58
PDLIM1-205ENST00000493949 PCDHA2Q9Y5H9 948 aa11.43□□□□□ -0.58
PDLIM1-205ENST00000493949 A0A0U1RQJ8 604 aa11.42□□□□□ -0.58
PDLIM1-205ENST00000493949 GSTTP1A0A1W2PQM5 241 aa11.42□□□□□ -0.58
PDLIM1-205ENST00000493949 ESYT2A0FGR8 921 aa11.42□□□□□ -0.58
PDLIM1-205ENST00000493949 RNF225M0QZC1 329 aaPredicted RBP11.42□□□□□ -0.58
PDLIM1-205ENST00000493949 SLC30A4O14863 429 aa11.42□□□□□ -0.58
PDLIM1-205ENST00000493949 LILRB5O75023 590 aa11.42□□□□□ -0.58
PDLIM1-205ENST00000493949 PHACTR2O75167 634 aa11.42□□□□□ -0.58
PDLIM1-205ENST00000493949 FGFR1P11362 822 aa11.42□□□□□ -0.58
PDLIM1-205ENST00000493949 RFX1P22670 979 aa11.42□□□□□ -0.58
PDLIM1-205ENST00000493949 MCM7P33993 719 aa11.42□□□□□ -0.58
PDLIM1-205ENST00000493949 CDR1P51861 262 aa11.42□□□□□ -0.58
PDLIM1-205ENST00000493949 KIF11P52732 1056 aa11.42□□□□□ -0.58
PDLIM1-205ENST00000493949 TNNC1P63316 161 aa11.42□□□□□ -0.58
PDLIM1-205ENST00000493949 DMWDQ09019 674 aa11.42□□□□□ -0.58
PDLIM1-205ENST00000493949 GRM4Q14833 912 aa11.42□□□□□ -0.58
PDLIM1-205ENST00000493949 VWA3BQ502W6 1294 aa11.42□□□□□ -0.58
PDLIM1-205ENST00000493949 EARS2Q5JPH6 523 aaKnown RBP11.42□□□□□ -0.58
PDLIM1-205ENST00000493949 PPP4R3AQ6IN85 833 aa11.42□□□□□ -0.58
PDLIM1-205ENST00000493949 C15orf39Q6ZRI6 1047 aa11.42□□□□□ -0.58
PDLIM1-205ENST00000493949 SND1Q7KZF4 910 aaKnown RBP eCLIP11.42□□□□□ -0.58
PDLIM1-205ENST00000493949 SLC39A11Q8N1S5 342 aa11.42□□□□□ -0.58
PDLIM1-205ENST00000493949 SRBD1Q8N5C6 995 aaKnown RBP11.42□□□□□ -0.58
PDLIM1-205ENST00000493949 PJA1Q8NG27 643 aa11.42□□□□□ -0.58
PDLIM1-205ENST00000493949 RASSF8Q8NHQ8 419 aa11.42□□□□□ -0.58
PDLIM1-205ENST00000493949 FEZF2Q8TBJ5 459 aa11.42□□□□□ -0.58
PDLIM1-205ENST00000493949 ATRIPQ8WXE1 791 aa11.42□□□□□ -0.58
PDLIM1-205ENST00000493949 NELL1Q92832 810 aa11.42□□□□□ -0.58
PDLIM1-205ENST00000493949 GLG1Q92896 1179 aa11.42□□□□□ -0.58
PDLIM1-205ENST00000493949 CALR3Q96L12 384 aaKnown RBP11.42□□□□□ -0.58
PDLIM1-205ENST00000493949 CASD1Q96PB1 797 aa11.42□□□□□ -0.58
PDLIM1-205ENST00000493949 PIGSQ96S52 555 aa11.42□□□□□ -0.58
PDLIM1-205ENST00000493949 DUSP9Q99956 384 aaKnown RBP11.42□□□□□ -0.58
PDLIM1-205ENST00000493949 ADAM2Q99965 735 aa11.42□□□□□ -0.58
PDLIM1-205ENST00000493949 TRIM9Q9C026 710 aa11.42□□□□□ -0.58
PDLIM1-205ENST00000493949 BLZF1Q9H2G9 400 aa11.42□□□□□ -0.58
PDLIM1-205ENST00000493949 SFXN1Q9H9B4 322 aa11.42□□□□□ -0.58
PDLIM1-205ENST00000493949 ATP6V0A4Q9HBG4 840 aa11.42□□□□□ -0.58
PDLIM1-205ENST00000493949 GDF3Q9NR23 364 aa11.42□□□□□ -0.58
PDLIM1-205ENST00000493949 RNF19AQ9NV58 838 aa11.42□□□□□ -0.58
PDLIM1-205ENST00000493949 MAD2L2Q9UI95 211 aa11.42□□□□□ -0.58
PDLIM1-205ENST00000493949 GDAQ9Y2T3 454 aa11.42□□□□□ -0.58
PDLIM1-205ENST00000493949 PCDHA13Q9Y5I0 950 aa11.42□□□□□ -0.58
PDLIM1-205ENST00000493949 FLNBO75369 2602 aaKnown RBP11.42□□□□□ -0.58
PDLIM1-205ENST00000493949 WDR81Q562E7 1941 aa11.42□□□□□ -0.58
PDLIM1-205ENST00000493949 MTCL1Q9Y4B5 1905 aaKnown RBP11.42□□□□□ -0.58
PDLIM1-205ENST00000493949 SMIM35A0A1B0GVV1 85 aa11.41□□□□□ -0.58
PDLIM1-205ENST00000493949 DENND3A2RUS2 1198 aa11.41□□□□□ -0.58
PDLIM1-205ENST00000493949 VGLL3A8MV65 326 aa11.41□□□□□ -0.58
PDLIM1-205ENST00000493949 GCOM1H8Y6P7 765 aaPredicted RBP11.41□□□□□ -0.58
PDLIM1-205ENST00000493949 MEFVO15553 781 aaPredicted RBP11.41□□□□□ -0.58
PDLIM1-205ENST00000493949 HOXA2O43364 376 aa11.41□□□□□ -0.58
PDLIM1-205ENST00000493949 OR52Z1P0C646 297 aa11.41□□□□□ -0.58
PDLIM1-205ENST00000493949 POLR2MP0CAP2 368 aa11.41□□□□□ -0.58
PDLIM1-205ENST00000493949 INSRRP14616 1297 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms