RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 ZNF844Q08AG5 666 aa14.67□□□□□ -0.06
VCP-207ENST00000493886 GRM1Q13255 1194 aa14.67□□□□□ -0.06
VCP-207ENST00000493886 PTGISQ16647 500 aa14.67□□□□□ -0.06
VCP-207ENST00000493886 SCARA3Q6AZY7 606 aa14.67□□□□□ -0.06
VCP-207ENST00000493886 ZNF473Q8WTR7 871 aaKnown RBP14.67□□□□□ -0.06
VCP-207ENST00000493886 ZNF668Q96K58 619 aaPredicted RBP14.67□□□□□ -0.06
VCP-207ENST00000493886 NLRP4Q96MN2 994 aa14.67□□□□□ -0.06
VCP-207ENST00000493886 CTNNA2P26232 953 aa14.67□□□□□ -0.06
VCP-207ENST00000493886 MDH1P40925 334 aaKnown RBP14.67□□□□□ -0.06
VCP-207ENST00000493886 TFDP1Q14186 410 aa14.67□□□□□ -0.06
VCP-207ENST00000493886 LLGL1Q15334 1064 aa14.67□□□□□ -0.06
VCP-207ENST00000493886 SWT1Q5T5J6 900 aaKnown RBP14.67□□□□□ -0.06
VCP-207ENST00000493886 SEL1L2Q5TEA6 688 aa14.67□□□□□ -0.06
VCP-207ENST00000493886 EFCAB12Q6NXP0 572 aa14.67□□□□□ -0.06
VCP-207ENST00000493886 CYFIP2Q96F07 1278 aa14.67□□□□□ -0.06
VCP-207ENST00000493886 IMPG2Q9BZV3 1241 aa14.67□□□□□ -0.06
VCP-207ENST00000493886 EPN3Q9H201 632 aa14.67□□□□□ -0.06
VCP-207ENST00000493886 AVENQ9NQS1 362 aaPredicted RBP14.67□□□□□ -0.06
VCP-207ENST00000493886 CNTN6Q9UQ52 1028 aa14.67□□□□□ -0.06
VCP-207ENST00000493886 SMIM23A6NLE4 172 aa14.66□□□□□ -0.06
VCP-207ENST00000493886 MYO1FO00160 1098 aa14.66□□□□□ -0.06
VCP-207ENST00000493886 GNA15P30679 374 aa14.66□□□□□ -0.06
VCP-207ENST00000493886 NSFP46459 744 aaKnown RBP14.66□□□□□ -0.06
VCP-207ENST00000493886 CLCN3P51790 818 aa14.66□□□□□ -0.06
VCP-207ENST00000493886 CCNA1P78396 465 aa14.66□□□□□ -0.06
VCP-207ENST00000493886 CENPCQ03188 943 aa14.66□□□□□ -0.06
VCP-207ENST00000493886 DHX9Q08211 1270 aaKnown RBP14.66□□□□□ -0.06
VCP-207ENST00000493886 NLRP14Q86W24 1093 aa14.66□□□□□ -0.06
VCP-207ENST00000493886 RBBP8NLQ8NC74 664 aaPredicted RBP14.66□□□□□ -0.06
VCP-207ENST00000493886 ATL2Q8NHH9 583 aa14.66□□□□□ -0.06
VCP-207ENST00000493886 MYCBPAPQ8TBZ2 947 aa14.66□□□□□ -0.06
VCP-207ENST00000493886 ZBTB10Q96DT7 871 aa14.66□□□□□ -0.06
VCP-207ENST00000493886 TRIM11Q96F44 468 aa14.66□□□□□ -0.06
VCP-207ENST00000493886 CCT8L2Q96SF2 557 aa14.66□□□□□ -0.06
VCP-207ENST00000493886 MTMR12Q9C0I1 747 aa14.66□□□□□ -0.06
VCP-207ENST00000493886 ZNF408Q9H9D4 720 aa14.66□□□□□ -0.06
VCP-207ENST00000493886 TMBIM4Q9HC24 238 aa14.66□□□□□ -0.06
VCP-207ENST00000493886 ANAPC7Q9UJX3 599 aa14.66□□□□□ -0.06
VCP-207ENST00000493886 CPSF3Q9UKF6 684 aaKnown RBP14.66□□□□□ -0.06
VCP-207ENST00000493886 ATP8A1Q9Y2Q0 1164 aa14.66□□□□□ -0.06
VCP-207ENST00000493886 UTP11Q9Y3A2 253 aaKnown RBP14.66□□□□□ -0.06
VCP-207ENST00000493886 PCDHA3Q9Y5H8 950 aa14.66□□□□□ -0.06
VCP-207ENST00000493886 INO80B-WBP1J3KQ70 363 aa14.66□□□□□ -0.06
VCP-207ENST00000493886 CST3P01034 146 aaPredicted RBP14.66□□□□□ -0.06
VCP-207ENST00000493886 MYBL1P10243 752 aa14.66□□□□□ -0.06
VCP-207ENST00000493886 PYGMP11217 842 aa14.66□□□□□ -0.06
VCP-207ENST00000493886 HSPA6P17066 643 aa14.66□□□□□ -0.06
VCP-207ENST00000493886 MAPK4P31152 587 aa14.66□□□□□ -0.06
VCP-207ENST00000493886 ARHGAP1Q07960 439 aa14.66□□□□□ -0.06
VCP-207ENST00000493886 GJC2Q5T442 439 aaPredicted RBP14.66□□□□□ -0.06
VCP-207ENST00000493886 SEC14L1Q92503 715 aa14.66□□□□□ -0.06
VCP-207ENST00000493886 INO80BQ9C086 356 aaPredicted RBP14.66□□□□□ -0.06
VCP-207ENST00000493886 FZD8Q9H461 694 aa14.66□□□□□ -0.06
VCP-207ENST00000493886 RNPEPQ9H4A4 650 aa14.66□□□□□ -0.06
VCP-207ENST00000493886 ERAP1Q9NZ08 941 aa14.66□□□□□ -0.06
VCP-207ENST00000493886 NOVA2Q9UNW9 492 aaKnown RBP14.66□□□□□ -0.06
VCP-207ENST00000493886 IQCA1LA6NCM1 817 aa14.65□□□□□ -0.06
VCP-207ENST00000493886 HMGB1P1B2RPK0 211 aaPredicted RBP14.65□□□□□ -0.06
VCP-207ENST00000493886 PDHXO00330 501 aa14.65□□□□□ -0.06
VCP-207ENST00000493886 ACKR2O00590 384 aa14.65□□□□□ -0.06
VCP-207ENST00000493886 ASS1P00966 412 aaKnown RBP14.65□□□□□ -0.06
VCP-207ENST00000493886 PROZP22891 400 aa14.65□□□□□ -0.06
VCP-207ENST00000493886 RRM1P23921 792 aa14.65□□□□□ -0.06
VCP-207ENST00000493886 IFT88Q13099 833 aa14.65□□□□□ -0.06
VCP-207ENST00000493886 ZNF792Q3KQV3 632 aa14.65□□□□□ -0.06
VCP-207ENST00000493886 KRT71Q3SY84 523 aa14.65□□□□□ -0.06
VCP-207ENST00000493886 ATF7IP2Q5U623 682 aa14.65□□□□□ -0.06
VCP-207ENST00000493886 MPZL3Q6UWV2 235 aa14.65□□□□□ -0.06
VCP-207ENST00000493886 TRIM72Q6ZMU5 477 aa14.65□□□□□ -0.06
VCP-207ENST00000493886 ABRAQ8N0Z2 381 aa14.65□□□□□ -0.06
VCP-207ENST00000493886 KIF3CO14782 793 aa14.65□□□□□ -0.06
VCP-207ENST00000493886 CFHP08603 1231 aa14.65□□□□□ -0.06
VCP-207ENST00000493886 ADORA2AP29274 412 aa14.65□□□□□ -0.06
VCP-207ENST00000493886 DR1Q01658 176 aa14.65□□□□□ -0.06
VCP-207ENST00000493886 SURF1Q15526 300 aa14.65□□□□□ -0.06
VCP-207ENST00000493886 TAPT1Q6NXT6 567 aa14.65□□□□□ -0.06
VCP-207ENST00000493886 MON1BQ7L1V2 547 aa14.65□□□□□ -0.06
VCP-207ENST00000493886 CD302Q8IX05 232 aa14.65□□□□□ -0.06
VCP-207ENST00000493886 UHMK1Q8TAS1 419 aaKnown RBP14.65□□□□□ -0.06
VCP-207ENST00000493886 PTPRHQ9HD43 1115 aa14.65□□□□□ -0.06
VCP-207ENST00000493886 SCN4AP35499 1836 aa14.65□□□□□ -0.06
VCP-207ENST00000493886 EVPLQ92817 2033 aa14.65□□□□□ -0.06
VCP-207ENST00000493886 MROH7Q68CQ1 1323 aa14.65□□□□□ -0.06
VCP-207ENST00000493886 H0YGN5 161 aa14.65□□□□□ -0.06
VCP-207ENST00000493886 C22orf31O95567 290 aa14.65□□□□□ -0.06
VCP-207ENST00000493886 RWDD2BP57060 319 aa14.65□□□□□ -0.06
VCP-207ENST00000493886 LAMC2Q13753 1193 aa14.65□□□□□ -0.06
VCP-207ENST00000493886 DUOXA2Q1HG44 320 aa14.65□□□□□ -0.06
VCP-207ENST00000493886 ZNF568Q3ZCX4 644 aa14.65□□□□□ -0.06
VCP-207ENST00000493886 C2CD6Q53TS8 623 aa14.65□□□□□ -0.06
VCP-207ENST00000493886 PHLDB2Q86SQ0 1253 aa14.65□□□□□ -0.06
VCP-207ENST00000493886 PNMA8AQ86V59 439 aaPredicted RBP14.65□□□□□ -0.06
VCP-207ENST00000493886 PASD1Q8IV76 773 aa14.65□□□□□ -0.06
VCP-207ENST00000493886 THNSL1Q8IYQ7 743 aa14.65□□□□□ -0.06
VCP-207ENST00000493886 LRRC45Q96CN5 670 aa14.65□□□□□ -0.06
VCP-207ENST00000493886 THOC1Q96FV9 657 aaKnown RBP14.65□□□□□ -0.06
VCP-207ENST00000493886 RAB17Q9H0T7 212 aa14.65□□□□□ -0.06
VCP-207ENST00000493886 FAM114A2Q9NRY5 505 aa14.65□□□□□ -0.06
VCP-207ENST00000493886 CLEC11AQ9Y240 323 aa14.65□□□□□ -0.06
VCP-207ENST00000493886 NFS1Q9Y697 457 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms