RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 CBWD3Q5JTY5 395 aa8.17□□□□□ -1.1
VEGFA-214ENST00000493786 CBWD5Q5RIA9 395 aa8.17□□□□□ -1.1
VEGFA-214ENST00000493786 C1orf220Q5T0J3 134 aa8.17□□□□□ -1.1
VEGFA-214ENST00000493786 FAM171A1Q5VUB5 890 aa8.17□□□□□ -1.1
VEGFA-214ENST00000493786 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.17□□□□□ -1.1
VEGFA-214ENST00000493786 GBP6Q6ZN66 633 aa8.17□□□□□ -1.1
VEGFA-214ENST00000493786 TMC7Q7Z402 723 aa8.17□□□□□ -1.1
VEGFA-214ENST00000493786 CEP57Q86XR8 500 aa8.17□□□□□ -1.1
VEGFA-214ENST00000493786 VPS52Q8N1B4 723 aa8.17□□□□□ -1.1
VEGFA-214ENST00000493786 MICAL1Q8TDZ2 1067 aa8.17□□□□□ -1.1
VEGFA-214ENST00000493786 GDPD5Q8WTR4 605 aa8.17□□□□□ -1.1
VEGFA-214ENST00000493786 PPP2R3CQ969Q6 453 aa8.17□□□□□ -1.1
VEGFA-214ENST00000493786 FAM84AQ96KN4 292 aa8.17□□□□□ -1.1
VEGFA-214ENST00000493786 SUSD3Q96L08 255 aa8.17□□□□□ -1.1
VEGFA-214ENST00000493786 MMS19Q96T76 1030 aa8.17□□□□□ -1.1
VEGFA-214ENST00000493786 HERC2P3Q9BVR0 1158 aa8.17□□□□□ -1.1
VEGFA-214ENST00000493786 DNAI2Q9GZS0 605 aa8.17□□□□□ -1.1
VEGFA-214ENST00000493786 LMAN2LQ9H0V9 348 aa8.17□□□□□ -1.1
VEGFA-214ENST00000493786 VPS16Q9H269 839 aa8.17□□□□□ -1.1
VEGFA-214ENST00000493786 NDST4Q9H3R1 872 aa8.17□□□□□ -1.1
VEGFA-214ENST00000493786 ALG13Q9NP73 1137 aaKnown RBP8.17□□□□□ -1.1
VEGFA-214ENST00000493786 ENTPD7Q9NQZ7 604 aa8.17□□□□□ -1.1
VEGFA-214ENST00000493786 TLR9Q9NR96 1032 aa8.17□□□□□ -1.1
VEGFA-214ENST00000493786 MARCH5Q9NX47 278 aa8.17□□□□□ -1.1
VEGFA-214ENST00000493786 RAB20Q9NX57 234 aa8.17□□□□□ -1.1
VEGFA-214ENST00000493786 GCNT4Q9P109 453 aa8.17□□□□□ -1.1
VEGFA-214ENST00000493786 LIMA1Q9UHB6 759 aaKnown RBP8.17□□□□□ -1.1
VEGFA-214ENST00000493786 SIX4Q9UIU6 781 aa8.17□□□□□ -1.1
VEGFA-214ENST00000493786 PCDHB8Q9UN66 801 aa8.17□□□□□ -1.1
VEGFA-214ENST00000493786 SNX9Q9Y5X1 595 aa8.17□□□□□ -1.1
VEGFA-214ENST00000493786 TDRD15B5MCY1 1934 aaKnown RBP8.17□□□□□ -1.1
VEGFA-214ENST00000493786 GTPBP10A4D1E9 387 aaKnown RBP8.16□□□□□ -1.1
VEGFA-214ENST00000493786 F8W810 466 aa8.16□□□□□ -1.1
VEGFA-214ENST00000493786 H7C4K7 107 aa8.16□□□□□ -1.1
VEGFA-214ENST00000493786 SOX1O00570 391 aaPredicted RBP8.16□□□□□ -1.1
VEGFA-214ENST00000493786 CYB561D2O14569 222 aa8.16□□□□□ -1.1
VEGFA-214ENST00000493786 PPEF2O14830 753 aa8.16□□□□□ -1.1
VEGFA-214ENST00000493786 SYN3O14994 580 aa8.16□□□□□ -1.1
VEGFA-214ENST00000493786 CBFA2T2O43439 604 aa8.16□□□□□ -1.1
VEGFA-214ENST00000493786 CSPG5O95196 566 aa8.16□□□□□ -1.1
VEGFA-214ENST00000493786 VNN1O95497 513 aa8.16□□□□□ -1.1
VEGFA-214ENST00000493786 STAU1O95793 577 aaKnown RBP8.16□□□□□ -1.1
VEGFA-214ENST00000493786 CST3P01034 146 aaPredicted RBP8.16□□□□□ -1.1
VEGFA-214ENST00000493786 ZNF18P17022 549 aa8.16□□□□□ -1.1
VEGFA-214ENST00000493786 BRCC3P46736 316 aa8.16□□□□□ -1.1
VEGFA-214ENST00000493786 COPB1P53618 953 aaKnown RBP8.16□□□□□ -1.1
VEGFA-214ENST00000493786 YWHAEP62258 255 aaKnown RBP8.16□□□□□ -1.1
VEGFA-214ENST00000493786 NOP14P78316 857 aaKnown RBP8.16□□□□□ -1.1
VEGFA-214ENST00000493786 PLCB2Q00722 1185 aa8.16□□□□□ -1.1
VEGFA-214ENST00000493786 SMC1AQ14683 1233 aaKnown RBP8.16□□□□□ -1.1
VEGFA-214ENST00000493786 EXOC3L4Q17RC7 722 aa8.16□□□□□ -1.1
VEGFA-214ENST00000493786 TIGD5Q53EQ6 642 aa8.16□□□□□ -1.1
VEGFA-214ENST00000493786 PDE12Q6L8Q7 609 aaKnown RBP8.16□□□□□ -1.1
VEGFA-214ENST00000493786 GPR153Q6NV75 609 aa8.16□□□□□ -1.1
VEGFA-214ENST00000493786 SCARA5Q6ZMJ2 495 aa8.16□□□□□ -1.1
VEGFA-214ENST00000493786 C15orf39Q6ZRI6 1047 aa8.16□□□□□ -1.1
VEGFA-214ENST00000493786 ANKS3Q6ZW76 656 aa8.16□□□□□ -1.1
VEGFA-214ENST00000493786 TMEM173Q86WV6 379 aaPredicted RBP8.16□□□□□ -1.1
VEGFA-214ENST00000493786 THEM5Q8N1Q8 247 aa8.16□□□□□ -1.1
VEGFA-214ENST00000493786 TOP6BLQ8N6T0 577 aa8.16□□□□□ -1.1
VEGFA-214ENST00000493786 C3orf58Q8NDZ4 430 aa8.16□□□□□ -1.1
VEGFA-214ENST00000493786 TAS1R2Q8TE23 839 aa8.16□□□□□ -1.1
VEGFA-214ENST00000493786 BCL7CQ8WUZ0 217 aaPredicted RBP8.16□□□□□ -1.1
VEGFA-214ENST00000493786 POF1BQ8WVV4 589 aa8.16□□□□□ -1.1
VEGFA-214ENST00000493786 LRCH3Q96II8 777 aa8.16□□□□□ -1.1
VEGFA-214ENST00000493786 SENP8Q96LD8 212 aa8.16□□□□□ -1.1
VEGFA-214ENST00000493786 PCMTD1Q96MG8 357 aaPredicted RBP8.16□□□□□ -1.1
VEGFA-214ENST00000493786 NT5C1BQ96P26 610 aa8.16□□□□□ -1.1
VEGFA-214ENST00000493786 GAS2L1Q99501 681 aaPredicted RBP8.16□□□□□ -1.1
VEGFA-214ENST00000493786 TCF25Q9BQ70 676 aa8.16□□□□□ -1.1
VEGFA-214ENST00000493786 TTPALQ9BTX7 342 aa8.16□□□□□ -1.1
VEGFA-214ENST00000493786 GPR62Q9BZJ7 368 aa8.16□□□□□ -1.1
VEGFA-214ENST00000493786 NIF3L1Q9GZT8 377 aa8.16□□□□□ -1.1
VEGFA-214ENST00000493786 INTS2Q9H0H0 1204 aaKnown RBP8.16□□□□□ -1.1
VEGFA-214ENST00000493786 NGRNQ9NPE2 291 aaKnown RBP8.16□□□□□ -1.1
VEGFA-214ENST00000493786 MRPL17Q9NRX2 175 aaKnown RBP8.16□□□□□ -1.1
VEGFA-214ENST00000493786 GDAP2Q9NXN4 497 aa8.16□□□□□ -1.1
VEGFA-214ENST00000493786 NXF1Q9UBU9 619 aaKnown RBP8.16□□□□□ -1.1
VEGFA-214ENST00000493786 TRIOBPQ9H2D6 2365 aa8.15□□□□□ -1.1
VEGFA-214ENST00000493786 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.15□□□□□ -1.1
VEGFA-214ENST00000493786 LGALS16A8MUM7 142 aa8.15□□□□□ -1.1
VEGFA-214ENST00000493786 I3L4J1 428 aa8.15□□□□□ -1.1
VEGFA-214ENST00000493786 M0QZQ0 153 aa8.15□□□□□ -1.1
VEGFA-214ENST00000493786 C2CD2LO14523 706 aa8.15□□□□□ -1.1
VEGFA-214ENST00000493786 SPTLC1O15269 473 aa8.15□□□□□ -1.1
VEGFA-214ENST00000493786 ASS1P00966 412 aaKnown RBP8.15□□□□□ -1.1
VEGFA-214ENST00000493786 ATP1A3P13637 1013 aa8.15□□□□□ -1.1
VEGFA-214ENST00000493786 TYMPP19971 482 aa8.15□□□□□ -1.1
VEGFA-214ENST00000493786 TBXAS1P24557 533 aaPredicted RBP8.15□□□□□ -1.1
VEGFA-214ENST00000493786 TKTP29401 623 aaKnown RBP8.15□□□□□ -1.1
VEGFA-214ENST00000493786 AARSP49588 968 aaKnown RBP eCLIP8.15□□□□□ -1.1
VEGFA-214ENST00000493786 UBASH3AP57075 661 aa8.15□□□□□ -1.1
VEGFA-214ENST00000493786 FANCCQ00597 558 aa8.15□□□□□ -1.1
VEGFA-214ENST00000493786 UBXN1Q04323 297 aa8.15□□□□□ -1.1
VEGFA-214ENST00000493786 YWHAHQ04917 246 aaPredicted RBP8.15□□□□□ -1.1
VEGFA-214ENST00000493786 MIIPQ5JXC2 388 aa8.15□□□□□ -1.1
VEGFA-214ENST00000493786 PLPP4Q5VZY2 271 aa8.15□□□□□ -1.1
VEGFA-214ENST00000493786 OVOS1Q6IE37 1185 aa8.15□□□□□ -1.1
VEGFA-214ENST00000493786 ZNF280DQ6N043 979 aa8.15□□□□□ -1.1
VEGFA-214ENST00000493786 DPH6Q7L8W6 267 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms