RNA–Protein interactions for RNA: ENST00000493615.5

NECTIN3-211, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NECTIN3, Length 1,876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-211ENST00000493615 TBX21Q9UL17 535 aa20.22■□□□□ 0.83
NECTIN3-211ENST00000493615 GIT1Q9Y2X7 761 aa20.22■□□□□ 0.83
NECTIN3-211ENST00000493615 ANO9A1A5B4 782 aa20.22■□□□□ 0.83
NECTIN3-211ENST00000493615 LCA5LO95447 670 aa20.22■□□□□ 0.83
NECTIN3-211ENST00000493615 ABL1P00519 1130 aa20.22■□□□□ 0.83
NECTIN3-211ENST00000493615 ATICP31939 592 aa20.22■□□□□ 0.83
NECTIN3-211ENST00000493615 C9orf57Q5W0N0 161 aa20.22■□□□□ 0.83
NECTIN3-211ENST00000493615 SLC20A1Q8WUM9 679 aa20.22■□□□□ 0.83
NECTIN3-211ENST00000493615 JAKMIP2Q96AA8 810 aa20.22■□□□□ 0.83
NECTIN3-211ENST00000493615 TSPYL2Q9H2G4 693 aaPredicted RBP20.22■□□□□ 0.83
NECTIN3-211ENST00000493615 RCCD1A6NED2 376 aa20.21■□□□□ 0.83
NECTIN3-211ENST00000493615 ZSCAN12O43309 604 aa20.21■□□□□ 0.83
NECTIN3-211ENST00000493615 NAB2Q15742 525 aa20.21■□□□□ 0.83
NECTIN3-211ENST00000493615 ZNF667Q5HYK9 610 aa20.21■□□□□ 0.83
NECTIN3-211ENST00000493615 SLC24A5Q71RS6 500 aa20.21■□□□□ 0.83
NECTIN3-211ENST00000493615 EPS8L1Q8TE68 723 aa20.21■□□□□ 0.83
NECTIN3-211ENST00000493615 TSPAN18Q96SJ8 248 aa20.21■□□□□ 0.83
NECTIN3-211ENST00000493615 SDCBP2Q9H190 292 aa20.21■□□□□ 0.83
NECTIN3-211ENST00000493615 CACNG4Q9UBN1 327 aa20.21■□□□□ 0.83
NECTIN3-211ENST00000493615 TET1Q8NFU7 2136 aa20.21■□□□□ 0.83
NECTIN3-211ENST00000493615 TRIM43BA6NCK2 446 aa20.2■□□□□ 0.82
NECTIN3-211ENST00000493615 DDX3XO00571 662 aaKnown RBP eCLIP20.2■□□□□ 0.82
NECTIN3-211ENST00000493615 CCDC172P0C7W6 258 aa20.2■□□□□ 0.82
NECTIN3-211ENST00000493615 CD58P19256 250 aa20.2■□□□□ 0.82
NECTIN3-211ENST00000493615 RAP1GAPP47736 663 aa20.2■□□□□ 0.82
NECTIN3-211ENST00000493615 SCNN1GP51170 649 aa20.2■□□□□ 0.82
NECTIN3-211ENST00000493615 CDH8P55286 799 aa20.2■□□□□ 0.82
NECTIN3-211ENST00000493615 FAM189BP81408 668 aa20.2■□□□□ 0.82
NECTIN3-211ENST00000493615 SLC18A3Q16572 532 aa20.2■□□□□ 0.82
NECTIN3-211ENST00000493615 TMEM270Q6UE05 265 aa20.2■□□□□ 0.82
NECTIN3-211ENST00000493615 NOP9Q86U38 636 aaKnown RBP20.2■□□□□ 0.82
NECTIN3-211ENST00000493615 FMNL3Q8IVF7 1028 aa20.2■□□□□ 0.82
NECTIN3-211ENST00000493615 LNX1Q8TBB1 728 aaPredicted RBP20.2■□□□□ 0.82
NECTIN3-211ENST00000493615 TRIM43Q96BQ3 446 aaPredicted RBP20.2■□□□□ 0.82
NECTIN3-211ENST00000493615 SMYD3Q9H7B4 428 aa20.2■□□□□ 0.82
NECTIN3-211ENST00000493615 RSAD1Q9HA92 442 aa20.2■□□□□ 0.82
NECTIN3-211ENST00000493615 CISHQ9NSE2 258 aa20.2■□□□□ 0.82
NECTIN3-211ENST00000493615 NOCTQ9UK39 431 aaKnown RBP20.2■□□□□ 0.82
NECTIN3-211ENST00000493615 CNTN6Q9UQ52 1028 aa20.2■□□□□ 0.82
NECTIN3-211ENST00000493615 PCDHB4Q9Y5E5 795 aa20.2■□□□□ 0.82
NECTIN3-211ENST00000493615 PIRO00625 290 aa20.2■□□□□ 0.82
NECTIN3-211ENST00000493615 OFD1O75665 1012 aa20.2■□□□□ 0.82
NECTIN3-211ENST00000493615 STAU1O95793 577 aaKnown RBP20.2■□□□□ 0.82
NECTIN3-211ENST00000493615 CHRNB2P17787 502 aa20.2■□□□□ 0.82
NECTIN3-211ENST00000493615 IGFBP6P24592 240 aaPredicted RBP20.2■□□□□ 0.82
NECTIN3-211ENST00000493615 GLYCTKQ8IVS8 523 aa20.2■□□□□ 0.82
NECTIN3-211ENST00000493615 SLC30A5Q8TAD4 765 aa20.2■□□□□ 0.82
NECTIN3-211ENST00000493615 FTHL17Q9BXU8 183 aa20.2■□□□□ 0.82
NECTIN3-211ENST00000493615 BCO2Q9BYV7 579 aa20.2■□□□□ 0.82
NECTIN3-211ENST00000493615 R3HCC1Q9Y3T6 440 aaKnown RBP20.2■□□□□ 0.82
NECTIN3-211ENST00000493615 ENPP3O14638 875 aa20.19■□□□□ 0.82
NECTIN3-211ENST00000493615 SKIP12755 728 aa20.19■□□□□ 0.82
NECTIN3-211ENST00000493615 CYP11B1P15538 503 aa20.19■□□□□ 0.82
NECTIN3-211ENST00000493615 SYN1P17600 705 aa20.19■□□□□ 0.82
NECTIN3-211ENST00000493615 CYP3A5P20815 502 aa20.19■□□□□ 0.82
NECTIN3-211ENST00000493615 KRT83P78385 493 aa20.19■□□□□ 0.82
NECTIN3-211ENST00000493615 SPA17Q15506 151 aa20.19■□□□□ 0.82
NECTIN3-211ENST00000493615 DNAAF5Q86Y56 855 aa20.19■□□□□ 0.82
NECTIN3-211ENST00000493615 PALB2Q86YC2 1186 aa20.19■□□□□ 0.82
NECTIN3-211ENST00000493615 PGBD4Q96DM1 585 aa20.19■□□□□ 0.82
NECTIN3-211ENST00000493615 RPS6KC1Q96S38 1066 aa20.19■□□□□ 0.82
NECTIN3-211ENST00000493615 AGPAT1Q99943 283 aa20.19■□□□□ 0.82
NECTIN3-211ENST00000493615 PCDHA13Q9Y5I0 950 aa20.19■□□□□ 0.82
NECTIN3-211ENST00000493615 TNRC18O15417 2968 aaPredicted RBP20.19■□□□□ 0.82
NECTIN3-211ENST00000493615 SCN1AP35498 2009 aa20.18■□□□□ 0.82
NECTIN3-211ENST00000493615 SPTLC1O15269 473 aa20.18■□□□□ 0.82
NECTIN3-211ENST00000493615 XPOTO43592 962 aaKnown RBP20.18■□□□□ 0.82
NECTIN3-211ENST00000493615 CXCL10P02778 98 aa20.18■□□□□ 0.82
NECTIN3-211ENST00000493615 THP07101 528 aa20.18■□□□□ 0.82
NECTIN3-211ENST00000493615 ITGB8P26012 769 aa20.18■□□□□ 0.82
NECTIN3-211ENST00000493615 ARHGAP25P42331 645 aa20.18■□□□□ 0.82
NECTIN3-211ENST00000493615 TAF3Q5VWG9 929 aa20.18■□□□□ 0.82
NECTIN3-211ENST00000493615 LRRC52Q8N7C0 313 aa20.18■□□□□ 0.82
NECTIN3-211ENST00000493615 RBBP8NLQ8NC74 664 aaPredicted RBP20.18■□□□□ 0.82
NECTIN3-211ENST00000493615 DDX1Q92499 740 aaKnown RBP20.18■□□□□ 0.82
NECTIN3-211ENST00000493615 SEPT8Q92599 483 aa20.18■□□□□ 0.82
NECTIN3-211ENST00000493615 VWCEQ96DN2 955 aa20.18■□□□□ 0.82
NECTIN3-211ENST00000493615 C16orf45Q96MC5 204 aaPredicted RBP20.18■□□□□ 0.82
NECTIN3-211ENST00000493615 LACRTQ9GZZ8 138 aa20.18■□□□□ 0.82
NECTIN3-211ENST00000493615 LZTFL1Q9NQ48 299 aa20.18■□□□□ 0.82
NECTIN3-211ENST00000493615 TRIM10Q9UDY6 481 aa20.18■□□□□ 0.82
NECTIN3-211ENST00000493615 ZMYND8Q9ULU4 1186 aaPredicted RBP20.18■□□□□ 0.82
NECTIN3-211ENST00000493615 NENFQ9UMX5 172 aa20.18■□□□□ 0.82
NECTIN3-211ENST00000493615 FAM170AA1A519 330 aa20.18■□□□□ 0.82
NECTIN3-211ENST00000493615 IPO7O95373 1038 aaKnown RBP20.18■□□□□ 0.82
NECTIN3-211ENST00000493615 POMCP01189 267 aa20.18■□□□□ 0.82
NECTIN3-211ENST00000493615 ZNF132P52740 706 aa20.18■□□□□ 0.82
NECTIN3-211ENST00000493615 MYO1EQ12965 1108 aa20.18■□□□□ 0.82
NECTIN3-211ENST00000493615 BMS1Q14692 1282 aaKnown RBP20.18■□□□□ 0.82
NECTIN3-211ENST00000493615 DEFB128Q7Z7B8 93 aa20.18■□□□□ 0.82
NECTIN3-211ENST00000493615 PRKAG2Q9UGJ0 569 aa20.18■□□□□ 0.82
NECTIN3-211ENST00000493615 NAGPAQ9UK23 515 aa20.18■□□□□ 0.82
NECTIN3-211ENST00000493615 INPP5FQ9Y2H2 1132 aa20.18■□□□□ 0.82
NECTIN3-211ENST00000493615 PDCD11Q14690 1871 aaKnown RBP20.17■□□□□ 0.82
NECTIN3-211ENST00000493615 SCN5AQ14524 2016 aa20.17■□□□□ 0.82
NECTIN3-211ENST00000493615 CCP110O43303 1012 aa20.17■□□□□ 0.82
NECTIN3-211ENST00000493615 EOMESO95936 686 aa20.17■□□□□ 0.82
NECTIN3-211ENST00000493615 RAG1P15918 1043 aa20.17■□□□□ 0.82
NECTIN3-211ENST00000493615 ANXA13P27216 316 aa20.17■□□□□ 0.82
NECTIN3-211ENST00000493615 LRPAP1P30533 357 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms