RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 C8AP07357 584 aa11.6□□□□□ -0.55
COL6A3-214ENST00000493608 ZSCAN22P10073 491 aaPredicted RBP11.6□□□□□ -0.55
COL6A3-214ENST00000493608 GBP2P32456 591 aaPredicted RBP11.6□□□□□ -0.55
COL6A3-214ENST00000493608 RPL9P32969 192 aaKnown RBP11.6□□□□□ -0.55
COL6A3-214ENST00000493608 ACOT2P49753 483 aa11.6□□□□□ -0.55
COL6A3-214ENST00000493608 NTHL1P78549 312 aa11.6□□□□□ -0.55
COL6A3-214ENST00000493608 SIGLEC14Q08ET2 396 aa11.6□□□□□ -0.55
COL6A3-214ENST00000493608 KCNA1Q09470 495 aa11.6□□□□□ -0.55
COL6A3-214ENST00000493608 ENOX2Q16206 610 aaKnown RBP11.6□□□□□ -0.55
COL6A3-214ENST00000493608 OTOP3Q7RTS5 596 aa11.6□□□□□ -0.55
COL6A3-214ENST00000493608 GRASPQ7Z6J2 395 aaPredicted RBP11.6□□□□□ -0.55
COL6A3-214ENST00000493608 ZDHHC14Q8IZN3 488 aa11.6□□□□□ -0.55
COL6A3-214ENST00000493608 HDAC7Q8WUI4 952 aa11.6□□□□□ -0.55
COL6A3-214ENST00000493608 MYADMQ96S97 322 aa11.6□□□□□ -0.55
COL6A3-214ENST00000493608 MRPL44Q9H9J2 332 aaKnown RBP11.6□□□□□ -0.55
COL6A3-214ENST00000493608 WDR6Q9NNW5 1121 aaKnown RBP11.6□□□□□ -0.55
COL6A3-214ENST00000493608 MTRRQ9UBK8 725 aa11.6□□□□□ -0.55
COL6A3-214ENST00000493608 FBXW11Q9UKB1 542 aa11.6□□□□□ -0.55
COL6A3-214ENST00000493608 POLIQ9UNA4 740 aa11.6□□□□□ -0.55
COL6A3-214ENST00000493608 SORCS3Q9UPU3 1222 aa11.6□□□□□ -0.55
COL6A3-214ENST00000493608 USTQ9Y2C2 406 aa11.6□□□□□ -0.55
COL6A3-214ENST00000493608 CLUHO75153 1309 aa11.6□□□□□ -0.55
COL6A3-214ENST00000493608 SCN1AP35498 2009 aa11.59□□□□□ -0.55
COL6A3-214ENST00000493608 PPEF2O14830 753 aa11.59□□□□□ -0.55
COL6A3-214ENST00000493608 GCNT3O95395 438 aa11.59□□□□□ -0.55
COL6A3-214ENST00000493608 F13A1P00488 732 aa11.59□□□□□ -0.55
COL6A3-214ENST00000493608 PDGFBP01127 241 aaPredicted RBP11.59□□□□□ -0.55
COL6A3-214ENST00000493608 MCM4P33991 863 aa11.59□□□□□ -0.55
COL6A3-214ENST00000493608 PRR20EP86478 221 aa11.59□□□□□ -0.55
COL6A3-214ENST00000493608 PRR20CP86479 221 aa11.59□□□□□ -0.55
COL6A3-214ENST00000493608 PRR20DP86480 221 aa11.59□□□□□ -0.55
COL6A3-214ENST00000493608 PRR20BP86481 221 aa11.59□□□□□ -0.55
COL6A3-214ENST00000493608 PRR20AP86496 221 aa11.59□□□□□ -0.55
COL6A3-214ENST00000493608 PPP2R3AQ06190 1150 aa11.59□□□□□ -0.55
COL6A3-214ENST00000493608 RAB33AQ14088 237 aa11.59□□□□□ -0.55
COL6A3-214ENST00000493608 ZBTB6Q15916 424 aa11.59□□□□□ -0.55
COL6A3-214ENST00000493608 PPM1LQ5SGD2 360 aa11.59□□□□□ -0.55
COL6A3-214ENST00000493608 AXDND1Q5T1B0 1012 aaPredicted RBP11.59□□□□□ -0.55
COL6A3-214ENST00000493608 LIN9Q5TKA1 542 aa11.59□□□□□ -0.55
COL6A3-214ENST00000493608 ADALQ6DHV7 355 aa11.59□□□□□ -0.55
COL6A3-214ENST00000493608 JADE1Q6IE81 842 aa11.59□□□□□ -0.55
COL6A3-214ENST00000493608 PDXDC1Q6P996 788 aa11.59□□□□□ -0.55
COL6A3-214ENST00000493608 ANKS3Q6ZW76 656 aa11.59□□□□□ -0.55
COL6A3-214ENST00000493608 MAP4K3Q8IVH8 894 aa11.59□□□□□ -0.55
COL6A3-214ENST00000493608 ZSWIM2Q8NEG5 633 aa11.59□□□□□ -0.55
COL6A3-214ENST00000493608 SLC7A14Q8TBB6 771 aa11.59□□□□□ -0.55
COL6A3-214ENST00000493608 RSAD2Q8WXG1 361 aa11.59□□□□□ -0.55
COL6A3-214ENST00000493608 KCNN1Q92952 543 aa11.59□□□□□ -0.55
COL6A3-214ENST00000493608 ASIC4Q96FT7 647 aa11.59□□□□□ -0.55
COL6A3-214ENST00000493608 FGFBP2Q9BYJ0 223 aa11.59□□□□□ -0.55
COL6A3-214ENST00000493608 PLEKHA5Q9HAU0 1116 aa11.59□□□□□ -0.55
COL6A3-214ENST00000493608 ZDHHC7Q9NXF8 308 aa11.59□□□□□ -0.55
COL6A3-214ENST00000493608 CPSF3Q9UKF6 684 aaKnown RBP11.59□□□□□ -0.55
COL6A3-214ENST00000493608 TIMM13Q9Y5L4 95 aaPredicted RBP11.59□□□□□ -0.55
COL6A3-214ENST00000493608 NOTCH4Q99466 2003 aa11.59□□□□□ -0.55
COL6A3-214ENST00000493608 CUTAO60888 179 aa11.58□□□□□ -0.56
COL6A3-214ENST00000493608 PPP6R2O75170 966 aa11.58□□□□□ -0.56
COL6A3-214ENST00000493608 C1RP00736 705 aa11.58□□□□□ -0.56
COL6A3-214ENST00000493608 NFICP08651 508 aa11.58□□□□□ -0.56
COL6A3-214ENST00000493608 CASP5P51878 434 aa11.58□□□□□ -0.56
COL6A3-214ENST00000493608 MTMR3Q13615 1198 aa11.58□□□□□ -0.56
COL6A3-214ENST00000493608 SHC4Q6S5L8 630 aa11.58□□□□□ -0.56
COL6A3-214ENST00000493608 CYP26C1Q6V0L0 522 aa11.58□□□□□ -0.56
COL6A3-214ENST00000493608 GET4Q7L5D6 327 aaPredicted RBP11.58□□□□□ -0.56
COL6A3-214ENST00000493608 POMGNT1Q8WZA1 660 aa11.58□□□□□ -0.56
COL6A3-214ENST00000493608 HPS3Q969F9 1004 aa11.58□□□□□ -0.56
COL6A3-214ENST00000493608 DHX58Q96C10 678 aa11.58□□□□□ -0.56
COL6A3-214ENST00000493608 CHAMP1Q96JM3 812 aa11.58□□□□□ -0.56
COL6A3-214ENST00000493608 SUSD3Q96L08 255 aa11.58□□□□□ -0.56
COL6A3-214ENST00000493608 MFSD14AQ96MC6 490 aa11.58□□□□□ -0.56
COL6A3-214ENST00000493608 STRA6Q9BX79 667 aa11.58□□□□□ -0.56
COL6A3-214ENST00000493608 ST6GALNAC4Q9H4F1 302 aa11.58□□□□□ -0.56
COL6A3-214ENST00000493608 KCNK12Q9HB15 430 aa11.58□□□□□ -0.56
COL6A3-214ENST00000493608 PANK4Q9NVE7 773 aa11.58□□□□□ -0.56
COL6A3-214ENST00000493608 HCFC1R1Q9NWW0 138 aa11.58□□□□□ -0.56
COL6A3-214ENST00000493608 AGO2Q9UKV8 859 aaKnown RBP11.58□□□□□ -0.56
COL6A3-214ENST00000493608 UBQLN1Q9UMX0 589 aaKnown RBP11.58□□□□□ -0.56
COL6A3-214ENST00000493608 BACE2Q9Y5Z0 518 aa11.58□□□□□ -0.56
COL6A3-214ENST00000493608 MORC2Q9Y6X9 1032 aaPredicted RBP11.58□□□□□ -0.56
COL6A3-214ENST00000493608 ZDBF2Q9HCK1 2354 aa11.58□□□□□ -0.56
COL6A3-214ENST00000493608 ZNF318Q5VUA4 2279 aa11.58□□□□□ -0.56
COL6A3-214ENST00000493608 TCHHQ07283 1943 aa11.58□□□□□ -0.56
COL6A3-214ENST00000493608 WDR27A2RRH5 827 aa11.57□□□□□ -0.56
COL6A3-214ENST00000493608 GDF9O60383 454 aa11.57□□□□□ -0.56
COL6A3-214ENST00000493608 PRPF6O94906 941 aaKnown RBP11.57□□□□□ -0.56
COL6A3-214ENST00000493608 YEATS4O95619 227 aa11.57□□□□□ -0.56
COL6A3-214ENST00000493608 GAP43P17677 238 aa11.57□□□□□ -0.56
COL6A3-214ENST00000493608 SCP2P22307 547 aa11.57□□□□□ -0.56
COL6A3-214ENST00000493608 FSHRP23945 695 aa11.57□□□□□ -0.56
COL6A3-214ENST00000493608 ADSSP30520 456 aa11.57□□□□□ -0.56
COL6A3-214ENST00000493608 LRPAP1P30533 357 aa11.57□□□□□ -0.56
COL6A3-214ENST00000493608 ROR1Q01973 937 aa11.57□□□□□ -0.56
COL6A3-214ENST00000493608 DNM1Q05193 864 aaKnown RBP11.57□□□□□ -0.56
COL6A3-214ENST00000493608 MRPL58Q14197 206 aaKnown RBP11.57□□□□□ -0.56
COL6A3-214ENST00000493608 KYAT1Q16773 422 aa11.57□□□□□ -0.56
COL6A3-214ENST00000493608 CTXN3Q4LDR2 81 aa11.57□□□□□ -0.56
COL6A3-214ENST00000493608 L1TD1Q5T7N2 865 aaKnown RBP11.57□□□□□ -0.56
COL6A3-214ENST00000493608 SLFN12LQ6IEE8 588 aa11.57□□□□□ -0.56
COL6A3-214ENST00000493608 CRELD2Q6UXH1 353 aaPredicted RBP11.57□□□□□ -0.56
COL6A3-214ENST00000493608 DSTYKQ6XUX3 929 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms