RNA–Protein interactions for RNA: ENST00000493415.5

A1CF-210, Transcript of APOBEC1 complementation factor, humanhuman

TSL 5

Gene A1CF, Length 926 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-210ENST00000493415 YIPF1Q9Y548 306 aa6.32□□□□□ -1.4
A1CF-210ENST00000493415 IGF2RP11717 2491 aa6.32□□□□□ -1.4
A1CF-210ENST00000493415 TCHHQ07283 1943 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 ABCA7Q8IZY2 2146 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 CYP3A7-CYP3A51PA0A087WV96 503 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 A0A1B0GUA9 196 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 LNP1A1A4G5 178 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 TMEM189-UBE2V1I3L0A0 370 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 TAF4O00268 1085 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 ARNTLO00327 626 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 PODXLO00592 558 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 CPLX1O14810 134 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 DCLK1O15075 740 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 RNF40O75150 1001 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 AKAP3O75969 853 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 MICAL2O94851 1124 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 BAG4O95429 457 aaKnown RBP6.31□□□□□ -1.4
A1CF-210ENST00000493415 HMGB1P09429 215 aaKnown RBP6.31□□□□□ -1.4
A1CF-210ENST00000493415 ATF2P15336 505 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 CYP3A7P24462 503 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 IGFBP6P24592 240 aaPredicted RBP6.31□□□□□ -1.4
A1CF-210ENST00000493415 HOXA6P31267 233 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 RDXP35241 583 aaKnown RBP6.31□□□□□ -1.4
A1CF-210ENST00000493415 ARL2P36404 184 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 MAPK8P45983 427 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 DHPSP49366 369 aaPredicted RBP6.31□□□□□ -1.4
A1CF-210ENST00000493415 DGKEP52429 567 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 YARSP54577 528 aaKnown RBP6.31□□□□□ -1.4
A1CF-210ENST00000493415 EXOSC10Q01780 885 aaKnown RBP6.31□□□□□ -1.4
A1CF-210ENST00000493415 TNK2Q07912 1038 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 SSRP1Q08945 709 aaKnown RBP6.31□□□□□ -1.4
A1CF-210ENST00000493415 PLD1Q13393 1074 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 CCINQ13939 588 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 PTPAQ15257 358 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 MAPK6Q16659 721 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 DCAF4L1Q3SXM0 396 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 WDR44Q5JSH3 913 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 STXBP5Q5T5C0 1151 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 GPR158Q5T848 1215 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 SLC8B1Q6J4K2 584 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 APBB1IPQ7Z5R6 666 aaPredicted RBP6.31□□□□□ -1.4
A1CF-210ENST00000493415 NEK8Q86SG6 692 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 TTC30AQ86WT1 665 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 ARID3BQ8IVW6 561 aaPredicted RBP6.31□□□□□ -1.4
A1CF-210ENST00000493415 TCEAL8Q8IYN2 117 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 SYNPOQ8N3V7 929 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 C3orf58Q8NDZ4 430 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 TTC16Q8NEE8 873 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 DEPTORQ8TB45 409 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 RSPRY1Q96DX4 576 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 PRIMPOLQ96LW4 560 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 FAM20AQ96MK3 541 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 JAKMIP1Q96N16 626 aaKnown RBP6.31□□□□□ -1.4
A1CF-210ENST00000493415 PGLYRP2Q96PD5 576 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 GCNAQ96QF7 691 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 TMEM209Q96SK2 561 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 NFKBIZQ9BYH8 718 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 C2orf40Q9H1Z8 148 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 CXCL16Q9H2A7 254 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 ATXN3LQ9H3M9 355 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 NCOA5Q9HCD5 579 aaKnown RBP6.31□□□□□ -1.4
A1CF-210ENST00000493415 GPRC5CQ9NQ84 441 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 SH3GLB2Q9NR46 395 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 POLR3BQ9NW08 1133 aaPredicted RBP6.31□□□□□ -1.4
A1CF-210ENST00000493415 FBXL5Q9UKA1 691 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 KLK13Q9UKR3 277 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 INVSQ9Y283 1065 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 USP20Q9Y2K6 914 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 NEUROG3Q9Y4Z2 214 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 ASCC3Q8N3C0 2202 aaKnown RBP6.31□□□□□ -1.4
A1CF-210ENST00000493415 CEP192Q8TEP8 1941 aa6.31□□□□□ -1.4
A1CF-210ENST00000493415 ANK1P16157 1881 aa6.3□□□□□ -1.4
A1CF-210ENST00000493415 FRYQ5TBA9 3013 aa6.3□□□□□ -1.4
A1CF-210ENST00000493415 CCDC163A0A0D9SF12 145 aa6.3□□□□□ -1.4
A1CF-210ENST00000493415 SPAARA0A1B0GVQ0 90 aa6.3□□□□□ -1.4
A1CF-210ENST00000493415 BCLAF3A2AJT9 711 aaKnown RBP6.3□□□□□ -1.4
A1CF-210ENST00000493415 PATE3B3GLJ2 98 aa6.3□□□□□ -1.4
A1CF-210ENST00000493415 SYN3O14994 580 aa6.3□□□□□ -1.4
A1CF-210ENST00000493415 MOSPD3O75425 235 aa6.3□□□□□ -1.4
A1CF-210ENST00000493415 ABLIM3O94929 683 aa6.3□□□□□ -1.4
A1CF-210ENST00000493415 APBB3O95704 486 aa6.3□□□□□ -1.4
A1CF-210ENST00000493415 HARSP12081 509 aaKnown RBP6.3□□□□□ -1.4
A1CF-210ENST00000493415 GCFC2P16383 781 aaKnown RBP6.3□□□□□ -1.4
A1CF-210ENST00000493415 ATP2B1P20020 1258 aa6.3□□□□□ -1.4
A1CF-210ENST00000493415 CSRP1P21291 193 aaKnown RBP6.3□□□□□ -1.4
A1CF-210ENST00000493415 MARCKSP29966 332 aaPredicted RBP6.3□□□□□ -1.4
A1CF-210ENST00000493415 PI4KAP42356 2102 aa6.3□□□□□ -1.4
A1CF-210ENST00000493415 ALDH1A3P47895 512 aa6.3□□□□□ -1.4
A1CF-210ENST00000493415 MCM2P49736 904 aa6.3□□□□□ -1.4
A1CF-210ENST00000493415 ATXN3P54252 364 aaPredicted RBP6.3□□□□□ -1.4
A1CF-210ENST00000493415 EPHB3P54753 998 aa6.3□□□□□ -1.4
A1CF-210ENST00000493415 MLLT6P55198 1093 aaPredicted RBP6.3□□□□□ -1.4
A1CF-210ENST00000493415 OSTNP61366 133 aa6.3□□□□□ -1.4
A1CF-210ENST00000493415 SIM1P81133 766 aaPredicted RBP6.3□□□□□ -1.4
A1CF-210ENST00000493415 POU5F1BQ06416 359 aa6.3□□□□□ -1.4
A1CF-210ENST00000493415 NAB2Q15742 525 aa6.3□□□□□ -1.4
A1CF-210ENST00000493415 TAF12Q16514 161 aa6.3□□□□□ -1.4
A1CF-210ENST00000493415 UPP1Q16831 310 aa6.3□□□□□ -1.4
A1CF-210ENST00000493415 COL28A1Q2UY09 1125 aa6.3□□□□□ -1.4
A1CF-210ENST00000493415 ITPRIPL2Q3MIP1 535 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms