RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	HIST2H2BC	Q6DN03	193 aa		5.99	□□□□□ -1.45
SEC13-219	ENST00000492602	DHRS13	Q6UX07	377 aa		5.99	□□□□□ -1.45
SEC13-219	ENST00000492602	ATG14	Q6ZNE5	492 aa		5.99	□□□□□ -1.45
SEC13-219	ENST00000492602	TMC8	Q8IU68	726 aa		5.99	□□□□□ -1.45
SEC13-219	ENST00000492602	SMAP1	Q8IYB5	467 aa	Predicted RBP	5.99	□□□□□ -1.45
SEC13-219	ENST00000492602	SNIP1	Q8TAD8	396 aa	Known RBP	5.99	□□□□□ -1.45
SEC13-219	ENST00000492602	OLIG1	Q8TAK6	271 aa		5.99	□□□□□ -1.45
SEC13-219	ENST00000492602	RHBDD1	Q8TEB9	315 aa		5.99	□□□□□ -1.45
SEC13-219	ENST00000492602	TTC9	Q92623	222 aa		5.99	□□□□□ -1.45
SEC13-219	ENST00000492602	FGF11	Q92914	225 aa		5.99	□□□□□ -1.45
SEC13-219	ENST00000492602	EXOC4	Q96A65	974 aa		5.99	□□□□□ -1.45
SEC13-219	ENST00000492602	LIN37	Q96GY3	246 aa	Predicted RBP	5.99	□□□□□ -1.45
SEC13-219	ENST00000492602	TMEM176A	Q96HP8	235 aa		5.99	□□□□□ -1.45
SEC13-219	ENST00000492602	FAM227B	Q96M60	508 aa		5.99	□□□□□ -1.45
SEC13-219	ENST00000492602	PHF12	Q96QT6	1004 aa		5.99	□□□□□ -1.45
SEC13-219	ENST00000492602	LGMN	Q99538	433 aa		5.99	□□□□□ -1.45
SEC13-219	ENST00000492602	CDC6	Q99741	560 aa		5.99	□□□□□ -1.45
SEC13-219	ENST00000492602	SH2D3A	Q9BRG2	576 aa		5.99	□□□□□ -1.45
SEC13-219	ENST00000492602	TRIM6	Q9C030	488 aa	Predicted RBP	5.99	□□□□□ -1.45
SEC13-219	ENST00000492602	FZD8	Q9H461	694 aa		5.99	□□□□□ -1.45
SEC13-219	ENST00000492602	EBF3	Q9H4W6	596 aa		5.99	□□□□□ -1.45
SEC13-219	ENST00000492602	MINDY3	Q9H8M7	445 aa		5.99	□□□□□ -1.45
SEC13-219	ENST00000492602	IFT122	Q9HBG6	1241 aa		5.99	□□□□□ -1.45
SEC13-219	ENST00000492602	CPNE5	Q9HCH3	593 aa		5.99	□□□□□ -1.45
SEC13-219	ENST00000492602	GKN1	Q9NS71	199 aa		5.99	□□□□□ -1.45
SEC13-219	ENST00000492602	THG1L	Q9NWX6	298 aa	Known RBP	5.99	□□□□□ -1.45
SEC13-219	ENST00000492602	HSPBP1	Q9NZL4	362 aa		5.99	□□□□□ -1.45
SEC13-219	ENST00000492602	CEP72	Q9P209	647 aa		5.99	□□□□□ -1.45
SEC13-219	ENST00000492602	PARP2	Q9UGN5	583 aa		5.99	□□□□□ -1.45
SEC13-219	ENST00000492602	SEPT3	Q9UH03	358 aa		5.99	□□□□□ -1.45
SEC13-219	ENST00000492602	TPCN1	Q9ULQ1	816 aa		5.99	□□□□□ -1.45
SEC13-219	ENST00000492602	BACE2	Q9Y5Z0	518 aa		5.99	□□□□□ -1.45
SEC13-219	ENST00000492602		A0A0D9SFI3	127 aa		5.98	□□□□□ -1.45
SEC13-219	ENST00000492602	IPO5	O00410	1097 aa	Known RBP	5.98	□□□□□ -1.45
SEC13-219	ENST00000492602	ERLIN2	O94905	339 aa		5.98	□□□□□ -1.45
SEC13-219	ENST00000492602	ABLIM3	O94929	683 aa		5.98	□□□□□ -1.45
SEC13-219	ENST00000492602	SRGAP2C	P0DJJ0	459 aa		5.98	□□□□□ -1.45
SEC13-219	ENST00000492602	JUP	P14923	745 aa		5.98	□□□□□ -1.45
SEC13-219	ENST00000492602	FGFR3	P22607	806 aa		5.98	□□□□□ -1.45
SEC13-219	ENST00000492602	MCM2	P49736	904 aa		5.98	□□□□□ -1.45
SEC13-219	ENST00000492602	EPHA5	P54756	1037 aa		5.98	□□□□□ -1.45
SEC13-219	ENST00000492602	RPL6	Q02878	288 aa	Known RBP	5.98	□□□□□ -1.45
SEC13-219	ENST00000492602	ZNF33A	Q06730	810 aa		5.98	□□□□□ -1.45
SEC13-219	ENST00000492602	BYSL	Q13895	437 aa	Known RBP	5.98	□□□□□ -1.45
SEC13-219	ENST00000492602	SART3	Q15020	963 aa	Known RBP	5.98	□□□□□ -1.45
SEC13-219	ENST00000492602	SEC23A	Q15436	765 aa		5.98	□□□□□ -1.45
SEC13-219	ENST00000492602	CRY1	Q16526	586 aa		5.98	□□□□□ -1.45
SEC13-219	ENST00000492602	BROX	Q5VW32	411 aa		5.98	□□□□□ -1.45
SEC13-219	ENST00000492602	ANKS3	Q6ZW76	656 aa		5.98	□□□□□ -1.45
SEC13-219	ENST00000492602	ZNF589	Q86UQ0	364 aa	Predicted RBP	5.98	□□□□□ -1.45
SEC13-219	ENST00000492602	PLA2G4D	Q86XP0	818 aa		5.98	□□□□□ -1.45
SEC13-219	ENST00000492602	TCEAL8	Q8IYN2	117 aa		5.98	□□□□□ -1.45
SEC13-219	ENST00000492602	HACE1	Q8IYU2	909 aa		5.98	□□□□□ -1.45
SEC13-219	ENST00000492602	PGBD3	Q8N328	593 aa		5.98	□□□□□ -1.45
SEC13-219	ENST00000492602	PI4K2B	Q8TCG2	481 aa		5.98	□□□□□ -1.45
SEC13-219	ENST00000492602	WHAMM	Q8TF30	809 aa		5.98	□□□□□ -1.45
SEC13-219	ENST00000492602	EZH1	Q92800	747 aa	Predicted RBP	5.98	□□□□□ -1.45
SEC13-219	ENST00000492602	NAF1	Q96HR8	494 aa	Known RBP	5.98	□□□□□ -1.45
SEC13-219	ENST00000492602	CPB2	Q96IY4	423 aa		5.98	□□□□□ -1.45
SEC13-219	ENST00000492602	ZNF577	Q9BSK1	485 aa		5.98	□□□□□ -1.45
SEC13-219	ENST00000492602	POLR3C	Q9BUI4	534 aa	Predicted RBP	5.98	□□□□□ -1.45
SEC13-219	ENST00000492602	NXF3	Q9H4D5	531 aa	Known RBP	5.98	□□□□□ -1.45
SEC13-219	ENST00000492602	HPS4	Q9NQG7	708 aa		5.98	□□□□□ -1.45
SEC13-219	ENST00000492602	TBC1D22B	Q9NU19	505 aa		5.98	□□□□□ -1.45
SEC13-219	ENST00000492602	OBP2A	Q9NY56	170 aa		5.98	□□□□□ -1.45
SEC13-219	ENST00000492602	BCCIP	Q9P287	314 aa	Known RBP eCLIP	5.98	□□□□□ -1.45
SEC13-219	ENST00000492602	RCAN3	Q9UKA8	241 aa		5.98	□□□□□ -1.45
SEC13-219	ENST00000492602	PCDH15	Q96QU1	1955 aa		5.98	□□□□□ -1.45
SEC13-219	ENST00000492602	KIF26A	Q9ULI4	1882 aa	Predicted RBP	5.98	□□□□□ -1.45
SEC13-219	ENST00000492602	TDRD15	B5MCY1	1934 aa	Known RBP	5.97	□□□□□ -1.45
SEC13-219	ENST00000492602	KNTC1	P50748	2209 aa		5.97	□□□□□ -1.45
SEC13-219	ENST00000492602	IGKV6-21	A0A0C4DH24	114 aa		5.97	□□□□□ -1.45
SEC13-219	ENST00000492602		A0A1W2PQD8	194 aa		5.97	□□□□□ -1.45
SEC13-219	ENST00000492602	TMEM150B	A6NC51	233 aa		5.97	□□□□□ -1.45
SEC13-219	ENST00000492602	PRAMEF12	O95522	483 aa		5.97	□□□□□ -1.45
SEC13-219	ENST00000492602	AFP	P02771	609 aa	Known RBP	5.97	□□□□□ -1.45
SEC13-219	ENST00000492602	TKT	P29401	623 aa	Known RBP	5.97	□□□□□ -1.45
SEC13-219	ENST00000492602	SEC13	P55735	322 aa		5.97	□□□□□ -1.45
SEC13-219	ENST00000492602	NFKB2	Q00653	900 aa		5.97	□□□□□ -1.45
SEC13-219	ENST00000492602	NCBP1	Q09161	790 aa	Known RBP	5.97	□□□□□ -1.45
SEC13-219	ENST00000492602	MYO1E	Q12965	1108 aa		5.97	□□□□□ -1.45
SEC13-219	ENST00000492602	GRIK2	Q13002	908 aa		5.97	□□□□□ -1.45
SEC13-219	ENST00000492602	TARBP2	Q15633	366 aa	Known RBP	5.97	□□□□□ -1.45
SEC13-219	ENST00000492602	UGCG	Q16739	394 aa		5.97	□□□□□ -1.45
SEC13-219	ENST00000492602	MAP7D1	Q3KQU3	841 aa		5.97	□□□□□ -1.45
SEC13-219	ENST00000492602	GPR158	Q5T848	1215 aa		5.97	□□□□□ -1.45
SEC13-219	ENST00000492602	SLC8B1	Q6J4K2	584 aa		5.97	□□□□□ -1.45
SEC13-219	ENST00000492602	NOTUM	Q6P988	496 aa		5.97	□□□□□ -1.45
SEC13-219	ENST00000492602	SRGAP1	Q7Z6B7	1085 aa		5.97	□□□□□ -1.45
SEC13-219	ENST00000492602	TMPRSS12	Q86WS5	348 aa		5.97	□□□□□ -1.45
SEC13-219	ENST00000492602	RGL4	Q8IZJ4	473 aa		5.97	□□□□□ -1.45
SEC13-219	ENST00000492602	CCDC33	Q8N5R6	958 aa		5.97	□□□□□ -1.45
SEC13-219	ENST00000492602	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	5.97	□□□□□ -1.45
SEC13-219	ENST00000492602	CCDC26	Q8TAB7	109 aa		5.97	□□□□□ -1.45
SEC13-219	ENST00000492602	BAHD1	Q8TBE0	780 aa	Predicted RBP	5.97	□□□□□ -1.45
SEC13-219	ENST00000492602	SLC7A3	Q8WY07	619 aa		5.97	□□□□□ -1.45
SEC13-219	ENST00000492602	CD101	Q93033	1021 aa		5.97	□□□□□ -1.45
SEC13-219	ENST00000492602	DDX27	Q96GQ7	796 aa	Known RBP	5.97	□□□□□ -1.45
SEC13-219	ENST00000492602	TBC1D32	Q96NH3	1257 aa		5.97	□□□□□ -1.45
SEC13-219	ENST00000492602	PSMG3-AS1	Q96PY0	264 aa		5.97	□□□□□ -1.45

Retrieved 100 of 20,778 RNA–protein pairs in 20 ms