RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 DRC7Q8IY82 874 aa3.73□□□□□ -1.81
HMGB1P30-201ENST00000492455 KIAA0319LQ8IZA0 1049 aa3.73□□□□□ -1.81
HMGB1P30-201ENST00000492455 ZNF366Q8N895 744 aa3.73□□□□□ -1.81
HMGB1P30-201ENST00000492455 OR5M3Q8NGP4 307 aa3.73□□□□□ -1.81
HMGB1P30-201ENST00000492455 CYFIP2Q96F07 1278 aa3.73□□□□□ -1.81
HMGB1P30-201ENST00000492455 SLC39A13Q96H72 371 aa3.73□□□□□ -1.81
HMGB1P30-201ENST00000492455 UHRF1Q96T88 793 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P30-201ENST00000492455 VRK1Q99986 396 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P30-201ENST00000492455 SLC46A2Q9BY10 475 aa3.73□□□□□ -1.81
HMGB1P30-201ENST00000492455 B3GNT5Q9BYG0 378 aa3.73□□□□□ -1.81
HMGB1P30-201ENST00000492455 CPEB1Q9BZB8 566 aaKnown RBP3.73□□□□□ -1.81
HMGB1P30-201ENST00000492455 WDR11Q9BZH6 1224 aa3.73□□□□□ -1.81
HMGB1P30-201ENST00000492455 SENP6Q9GZR1 1112 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P30-201ENST00000492455 TMEM60Q9H2L4 133 aa3.73□□□□□ -1.81
HMGB1P30-201ENST00000492455 MANSC1Q9H8J5 431 aa3.73□□□□□ -1.81
HMGB1P30-201ENST00000492455 ARNT2Q9HBZ2 717 aa3.73□□□□□ -1.81
HMGB1P30-201ENST00000492455 PRDM11Q9NQV5 511 aa3.73□□□□□ -1.81
HMGB1P30-201ENST00000492455 DDX21Q9NR30 783 aaKnown RBP eCLIP3.73□□□□□ -1.81
HMGB1P30-201ENST00000492455 CHST12Q9NRB3 414 aa3.73□□□□□ -1.81
HMGB1P30-201ENST00000492455 NR2E3Q9Y5X4 410 aa3.73□□□□□ -1.81
HMGB1P30-201ENST00000492455 FRMPD2Q68DX3 1309 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P30-201ENST00000492455 CCDC194A0A1B0GVG4 234 aa3.72□□□□□ -1.81
HMGB1P30-201ENST00000492455 GRXCR1A8MXD5 290 aa3.72□□□□□ -1.81
HMGB1P30-201ENST00000492455 TPP1O14773 563 aa3.72□□□□□ -1.81
HMGB1P30-201ENST00000492455 FTLP02792 175 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P30-201ENST00000492455 HRGP04196 525 aa3.72□□□□□ -1.81
HMGB1P30-201ENST00000492455 SBK3P0C264 359 aa3.72□□□□□ -1.81
HMGB1P30-201ENST00000492455 HKR1P10072 659 aa3.72□□□□□ -1.81
HMGB1P30-201ENST00000492455 MALP21145 153 aa3.72□□□□□ -1.81
HMGB1P30-201ENST00000492455 PER3P56645 1201 aa3.72□□□□□ -1.81
HMGB1P30-201ENST00000492455 RAB39AQ14964 217 aa3.72□□□□□ -1.81
HMGB1P30-201ENST00000492455 LLGL1Q15334 1064 aa3.72□□□□□ -1.81
HMGB1P30-201ENST00000492455 FLYWCH1Q4VC44 716 aa3.72□□□□□ -1.81
HMGB1P30-201ENST00000492455 OTUD7BQ6GQQ9 843 aa3.72□□□□□ -1.81
HMGB1P30-201ENST00000492455 KRTAP5-11Q6L8G4 156 aa3.72□□□□□ -1.81
HMGB1P30-201ENST00000492455 NPNTQ6UXI9 565 aa3.72□□□□□ -1.81
HMGB1P30-201ENST00000492455 SEM1Q6ZVN7 128 aa3.72□□□□□ -1.81
HMGB1P30-201ENST00000492455 XYLT1Q86Y38 959 aa3.72□□□□□ -1.81
HMGB1P30-201ENST00000492455 FAM43AQ8N2R8 423 aa3.72□□□□□ -1.81
HMGB1P30-201ENST00000492455 KLHDC4Q8TBB5 520 aa3.72□□□□□ -1.81
HMGB1P30-201ENST00000492455 COQ10AQ96MF6 247 aa3.72□□□□□ -1.81
HMGB1P30-201ENST00000492455 NT5C1BQ96P26 610 aa3.72□□□□□ -1.81
HMGB1P30-201ENST00000492455 CDC5LQ99459 802 aaKnown RBP3.72□□□□□ -1.81
HMGB1P30-201ENST00000492455 KRTAP1-5Q9BYS1 174 aa3.72□□□□□ -1.81
HMGB1P30-201ENST00000492455 ATP6V0A4Q9HBG4 840 aa3.72□□□□□ -1.81
HMGB1P30-201ENST00000492455 CALCOCO1Q9P1Z2 691 aa3.72□□□□□ -1.81
HMGB1P30-201ENST00000492455 ANKFY1Q9P2R3 1169 aa3.72□□□□□ -1.81
HMGB1P30-201ENST00000492455 L1RE1Q9UN81 338 aa3.72□□□□□ -1.81
HMGB1P30-201ENST00000492455 RUVBL1Q9Y265 456 aaKnown RBP3.72□□□□□ -1.81
HMGB1P30-201ENST00000492455 STXBP5LQ9Y2K9 1186 aa3.72□□□□□ -1.81
HMGB1P30-201ENST00000492455 PCDHA3Q9Y5H8 950 aa3.72□□□□□ -1.81
HMGB1P30-201ENST00000492455 A0A088AWK7 358 aa3.71□□□□□ -1.82
HMGB1P30-201ENST00000492455 PRSS29PA6NIE9 313 aa3.71□□□□□ -1.82
HMGB1P30-201ENST00000492455 F2RL2O00254 374 aa3.71□□□□□ -1.82
HMGB1P30-201ENST00000492455 SLC16A6O15403 523 aa3.71□□□□□ -1.82
HMGB1P30-201ENST00000492455 ZBED1O96006 694 aa3.71□□□□□ -1.82
HMGB1P30-201ENST00000492455 TRIM27P14373 513 aa3.71□□□□□ -1.82
HMGB1P30-201ENST00000492455 TYRP14679 529 aa3.71□□□□□ -1.82
HMGB1P30-201ENST00000492455 IL2RBP14784 551 aa3.71□□□□□ -1.82
HMGB1P30-201ENST00000492455 RHCEP18577 417 aa3.71□□□□□ -1.82
HMGB1P30-201ENST00000492455 HK1P19367 917 aa3.71□□□□□ -1.82
HMGB1P30-201ENST00000492455 PTTG1IPP53801 180 aa3.71□□□□□ -1.82
HMGB1P30-201ENST00000492455 RAB1AP62820 205 aa3.71□□□□□ -1.82
HMGB1P30-201ENST00000492455 RHDQ02161 417 aa3.71□□□□□ -1.82
HMGB1P30-201ENST00000492455 PLS1Q14651 629 aa3.71□□□□□ -1.82
HMGB1P30-201ENST00000492455 DACT2Q5SW24 774 aa3.71□□□□□ -1.82
HMGB1P30-201ENST00000492455 PPP4R3AQ6IN85 833 aa3.71□□□□□ -1.82
HMGB1P30-201ENST00000492455 DOK3Q7L591 496 aa3.71□□□□□ -1.82
HMGB1P30-201ENST00000492455 HEATR3Q7Z4Q2 680 aa3.71□□□□□ -1.82
HMGB1P30-201ENST00000492455 APBB1IPQ7Z5R6 666 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P30-201ENST00000492455 FAM90A1Q86YD7 464 aa3.71□□□□□ -1.82
HMGB1P30-201ENST00000492455 SYT12Q8IV01 421 aa3.71□□□□□ -1.82
HMGB1P30-201ENST00000492455 CAMKK1Q8N5S9 505 aa3.71□□□□□ -1.82
HMGB1P30-201ENST00000492455 CELF5Q8N6W0 485 aaKnown RBP3.71□□□□□ -1.82
HMGB1P30-201ENST00000492455 C3orf20Q8ND61 904 aa3.71□□□□□ -1.82
HMGB1P30-201ENST00000492455 FAM156AQ8NDB6 213 aa3.71□□□□□ -1.82
HMGB1P30-201ENST00000492455 OR52N2Q8NGI0 321 aa3.71□□□□□ -1.82
HMGB1P30-201ENST00000492455 CAGE1Q8TC20 777 aa3.71□□□□□ -1.82
HMGB1P30-201ENST00000492455 NDC1Q9BTX1 674 aa3.71□□□□□ -1.82
HMGB1P30-201ENST00000492455 SARGQ9BW04 601 aa3.71□□□□□ -1.82
HMGB1P30-201ENST00000492455 BHMT2Q9H2M3 363 aa3.71□□□□□ -1.82
HMGB1P30-201ENST00000492455 PRDM13Q9H4Q3 707 aa3.71□□□□□ -1.82
HMGB1P30-201ENST00000492455 TMEM140Q9NV12 185 aa3.71□□□□□ -1.82
HMGB1P30-201ENST00000492455 FBXO34Q9NWN3 711 aa3.71□□□□□ -1.82
HMGB1P30-201ENST00000492455 FAM227AF5H4B4 570 aa3.7□□□□□ -1.82
HMGB1P30-201ENST00000492455 APAF1O14727 1248 aa3.7□□□□□ -1.82
HMGB1P30-201ENST00000492455 PJA2O43164 708 aa3.7□□□□□ -1.82
HMGB1P30-201ENST00000492455 ZFPL1O95159 310 aa3.7□□□□□ -1.82
HMGB1P30-201ENST00000492455 MAP4K4O95819 1239 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P30-201ENST00000492455 CD1AP06126 327 aa3.7□□□□□ -1.82
HMGB1P30-201ENST00000492455 RAP2AP10114 183 aa3.7□□□□□ -1.82
HMGB1P30-201ENST00000492455 TYRP1P17643 537 aa3.7□□□□□ -1.82
HMGB1P30-201ENST00000492455 PRDX5P30044 214 aa3.7□□□□□ -1.82
HMGB1P30-201ENST00000492455 ABCG1P45844 678 aa3.7□□□□□ -1.82
HMGB1P30-201ENST00000492455 KRTAP10-6P60371 365 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P30-201ENST00000492455 BLOC1S1P78537 153 aa3.7□□□□□ -1.82
HMGB1P30-201ENST00000492455 HLTFQ14527 1009 aaKnown RBP eCLIP3.7□□□□□ -1.82
HMGB1P30-201ENST00000492455 BMT2Q1RMZ1 405 aa3.7□□□□□ -1.82
HMGB1P30-201ENST00000492455 ANO6Q4KMQ2 910 aa3.7□□□□□ -1.82
HMGB1P30-201ENST00000492455 LCE1AQ5T7P2 110 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms