RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 CAMK4Q16566 473 aa16.3■□□□□ 0.2
CDC42SE1-205ENST00000491825 FAM171A1Q5VUB5 890 aa16.3■□□□□ 0.2
CDC42SE1-205ENST00000491825 HS2ST1Q7LGA3 356 aa16.3■□□□□ 0.2
CDC42SE1-205ENST00000491825 C12orf56Q8IXR9 622 aa16.3■□□□□ 0.2
CDC42SE1-205ENST00000491825 CEP120Q8N960 986 aa16.3■□□□□ 0.2
CDC42SE1-205ENST00000491825 POMGNT1Q8WZA1 660 aa16.3■□□□□ 0.2
CDC42SE1-205ENST00000491825 ATOH1Q92858 354 aaPredicted RBP16.3■□□□□ 0.2
CDC42SE1-205ENST00000491825 PPP1R10Q96QC0 940 aaKnown RBP16.3■□□□□ 0.2
CDC42SE1-205ENST00000491825 MSTO1Q9BUK6 570 aa16.3■□□□□ 0.2
CDC42SE1-205ENST00000491825 KCTD10Q9H3F6 313 aa16.3■□□□□ 0.2
CDC42SE1-205ENST00000491825 AGPAT3Q9NRZ7 376 aa16.3■□□□□ 0.2
CDC42SE1-205ENST00000491825 TOPORSQ9NS56 1045 aaPredicted RBP16.3■□□□□ 0.2
CDC42SE1-205ENST00000491825 PDCD11Q14690 1871 aaKnown RBP16.3■□□□□ 0.2
CDC42SE1-205ENST00000491825 VPS13AQ96RL7 3174 aa16.3■□□□□ 0.2
CDC42SE1-205ENST00000491825 MYO10Q9HD67 2058 aa16.3■□□□□ 0.2
CDC42SE1-205ENST00000491825 PROB1E7EW31 1015 aa16.29■□□□□ 0.2
CDC42SE1-205ENST00000491825 TMEM189-UBE2V1I3L0A0 370 aa16.29■□□□□ 0.2
CDC42SE1-205ENST00000491825 PDXKO00764 312 aa16.29■□□□□ 0.2
CDC42SE1-205ENST00000491825 ADAM12O43184 909 aa16.29■□□□□ 0.2
CDC42SE1-205ENST00000491825 CLTAP09496 248 aa16.29■□□□□ 0.2
CDC42SE1-205ENST00000491825 AOC1P19801 751 aa16.29■□□□□ 0.2
CDC42SE1-205ENST00000491825 PPP1R2P41236 205 aa16.29■□□□□ 0.2
CDC42SE1-205ENST00000491825 MATR3P43243 847 aaKnown RBP eCLIP16.29■□□□□ 0.23e-6■■□□□ 12.7
CDC42SE1-205ENST00000491825 PSMD5Q16401 504 aa16.29■□□□□ 0.2
CDC42SE1-205ENST00000491825 XKR4Q5GH76 650 aa16.29■□□□□ 0.2
CDC42SE1-205ENST00000491825 CD300LGQ6UXG3 332 aa16.29■□□□□ 0.2
CDC42SE1-205ENST00000491825 RBM43Q6ZSC3 357 aaKnown RBP16.29■□□□□ 0.2
CDC42SE1-205ENST00000491825 NELFCDQ8IXH7 590 aa16.29■□□□□ 0.2
CDC42SE1-205ENST00000491825 SNX27Q96L92 541 aa16.29■□□□□ 0.2
CDC42SE1-205ENST00000491825 MFSD1Q9H3U5 465 aa16.29■□□□□ 0.2
CDC42SE1-205ENST00000491825 AGO2Q9UKV8 859 aaKnown RBP16.29■□□□□ 0.2
CDC42SE1-205ENST00000491825 TRAF3IP3Q9Y228 551 aa16.29■□□□□ 0.2
CDC42SE1-205ENST00000491825 CFAP54Q96N23 3096 aa16.29■□□□□ 0.2
CDC42SE1-205ENST00000491825 PI15O43692 258 aa16.28■□□□□ 0.2
CDC42SE1-205ENST00000491825 LDHAP00338 332 aaKnown RBP16.28■□□□□ 0.2
CDC42SE1-205ENST00000491825 ADRB2P07550 413 aa16.28■□□□□ 0.2
CDC42SE1-205ENST00000491825 HARSP12081 509 aaKnown RBP16.28■□□□□ 0.2
CDC42SE1-205ENST00000491825 LAMP2P13473 410 aa16.28■□□□□ 0.2
CDC42SE1-205ENST00000491825 YARSP54577 528 aaKnown RBP16.28■□□□□ 0.2
CDC42SE1-205ENST00000491825 ELAVL2Q12926 359 aaKnown RBP16.28■□□□□ 0.2
CDC42SE1-205ENST00000491825 NFIL3Q16649 462 aa16.28■□□□□ 0.2
CDC42SE1-205ENST00000491825 GLRA4Q5JXX5 417 aa16.28■□□□□ 0.2
CDC42SE1-205ENST00000491825 ARMCX5Q6P1M9 558 aa16.28■□□□□ 0.2
CDC42SE1-205ENST00000491825 ALKAL1Q6UXT8 129 aa16.28■□□□□ 0.2
CDC42SE1-205ENST00000491825 SMYD4Q8IYR2 804 aaPredicted RBP16.28■□□□□ 0.2
CDC42SE1-205ENST00000491825 SIX5Q8N196 739 aa16.28■□□□□ 0.2
CDC42SE1-205ENST00000491825 SLC44A3Q8N4M1 653 aa16.28■□□□□ 0.2
CDC42SE1-205ENST00000491825 FLCNQ8NFG4 579 aa16.28■□□□□ 0.2
CDC42SE1-205ENST00000491825 ACAP3Q96P50 834 aa16.28■□□□□ 0.2
CDC42SE1-205ENST00000491825 CBWD1Q9BRT8 395 aa16.28■□□□□ 0.2
CDC42SE1-205ENST00000491825 PLEKHA5Q9HAU0 1116 aa16.28■□□□□ 0.2
CDC42SE1-205ENST00000491825 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.28■□□□□ 0.24e-6■□□□□ 9
CDC42SE1-205ENST00000491825 CNTN3Q9P232 1028 aa16.28■□□□□ 0.2
CDC42SE1-205ENST00000491825 CPSF3Q9UKF6 684 aaKnown RBP16.28■□□□□ 0.2
CDC42SE1-205ENST00000491825 ANK1P16157 1881 aa16.27■□□□□ 0.2
CDC42SE1-205ENST00000491825 KRBA1A5PL33 1030 aa16.27■□□□□ 0.2
CDC42SE1-205ENST00000491825 ANHXE9PGG2 379 aa16.27■□□□□ 0.2
CDC42SE1-205ENST00000491825 GFRA3O60609 400 aa16.27■□□□□ 0.2
CDC42SE1-205ENST00000491825 HNRNPA1P09651 372 aaKnown RBP eCLIP16.27■□□□□ 0.2
CDC42SE1-205ENST00000491825 BMP6P22004 513 aa16.27■□□□□ 0.2
CDC42SE1-205ENST00000491825 FGFR3P22607 806 aa16.27■□□□□ 0.2
CDC42SE1-205ENST00000491825 HOXA9P31269 272 aa16.27■□□□□ 0.2
CDC42SE1-205ENST00000491825 NBL1P41271 181 aa16.27■□□□□ 0.2
CDC42SE1-205ENST00000491825 HTR4Q13639 388 aa16.27■□□□□ 0.2
CDC42SE1-205ENST00000491825 MYBPC2Q14324 1141 aa16.27■□□□□ 0.2
CDC42SE1-205ENST00000491825 KLHL40Q2TBA0 621 aa16.27■□□□□ 0.2
CDC42SE1-205ENST00000491825 ZCWPW2Q504Y3 356 aa16.27■□□□□ 0.2
CDC42SE1-205ENST00000491825 CCDC183Q5T5S1 534 aa16.27■□□□□ 0.2
CDC42SE1-205ENST00000491825 FOXR2Q6PJQ5 311 aa16.27■□□□□ 0.2
CDC42SE1-205ENST00000491825 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.27■□□□□ 0.2
CDC42SE1-205ENST00000491825 GET4Q7L5D6 327 aaPredicted RBP16.27■□□□□ 0.2
CDC42SE1-205ENST00000491825 CEP57Q86XR8 500 aa16.27■□□□□ 0.2
CDC42SE1-205ENST00000491825 SLC9A9Q8IVB4 645 aa16.27■□□□□ 0.2
CDC42SE1-205ENST00000491825 ADSSL1Q8N142 457 aa16.27■□□□□ 0.2
CDC42SE1-205ENST00000491825 C3orf58Q8NDZ4 430 aa16.27■□□□□ 0.2
CDC42SE1-205ENST00000491825 NXPE3Q969Y0 559 aa16.27■□□□□ 0.2
CDC42SE1-205ENST00000491825 TSPAN18Q96SJ8 248 aa16.27■□□□□ 0.2
CDC42SE1-205ENST00000491825 PIDD1Q9HB75 910 aa16.27■□□□□ 0.2
CDC42SE1-205ENST00000491825 MTRRQ9UBK8 725 aa16.27■□□□□ 0.2
CDC42SE1-205ENST00000491825 WNT16Q9UBV4 365 aa16.27■□□□□ 0.2
CDC42SE1-205ENST00000491825 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.27■□□□□ 0.2
CDC42SE1-205ENST00000491825 ZFHX2Q9C0A1 2572 aaPredicted RBP16.27■□□□□ 0.19
CDC42SE1-205ENST00000491825 MEFVO15553 781 aaPredicted RBP16.26■□□□□ 0.19
CDC42SE1-205ENST00000491825 EXTL3O43909 919 aa16.26■□□□□ 0.19
CDC42SE1-205ENST00000491825 C8AP07357 584 aa16.26■□□□□ 0.19
CDC42SE1-205ENST00000491825 POU2F2P09086 479 aa16.26■□□□□ 0.19
CDC42SE1-205ENST00000491825 CXCL8P10145 99 aa16.26■□□□□ 0.19
CDC42SE1-205ENST00000491825 SRFP11831 508 aa16.26■□□□□ 0.19
CDC42SE1-205ENST00000491825 KCNE1P15382 129 aa16.26■□□□□ 0.19
CDC42SE1-205ENST00000491825 TNFSF9P41273 254 aa16.26■□□□□ 0.19
CDC42SE1-205ENST00000491825 PRCPP42785 496 aa16.26■□□□□ 0.19
CDC42SE1-205ENST00000491825 CLCNKBP51801 687 aa16.26■□□□□ 0.19
CDC42SE1-205ENST00000491825 OSTNP61366 133 aa16.26■□□□□ 0.19
CDC42SE1-205ENST00000491825 SOX4Q06945 474 aaPredicted RBP16.26■□□□□ 0.19
CDC42SE1-205ENST00000491825 STIM1Q13586 685 aa16.26■□□□□ 0.19
CDC42SE1-205ENST00000491825 RAB33AQ14088 237 aa16.26■□□□□ 0.19
CDC42SE1-205ENST00000491825 ENOX2Q16206 610 aaKnown RBP16.26■□□□□ 0.19
CDC42SE1-205ENST00000491825 UPP1Q16831 310 aa16.26■□□□□ 0.19
CDC42SE1-205ENST00000491825 ZBTB41Q5SVQ8 909 aa16.26■□□□□ 0.19
CDC42SE1-205ENST00000491825 PDXDC1Q6P996 788 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms