RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 TOR1BO14657 336 aa5.51□□□□□ -1.53
PHC3-213ENST00000491258 PPP3CBP16298 524 aa5.51□□□□□ -1.53
PHC3-213ENST00000491258 SLC6A4P31645 630 aa5.51□□□□□ -1.53
PHC3-213ENST00000491258 GPR3P46089 330 aa5.51□□□□□ -1.53
PHC3-213ENST00000491258 CTXN1P60606 82 aa5.51□□□□□ -1.53
PHC3-213ENST00000491258 TMPRSS15P98073 1019 aa5.51□□□□□ -1.53
PHC3-213ENST00000491258 SLC10A2Q12908 348 aaPredicted RBP5.51□□□□□ -1.53
PHC3-213ENST00000491258 GRM1Q13255 1194 aa5.51□□□□□ -1.53
PHC3-213ENST00000491258 DYRK1AQ13627 763 aa5.51□□□□□ -1.53
PHC3-213ENST00000491258 LLGL1Q15334 1064 aa5.51□□□□□ -1.53
PHC3-213ENST00000491258 TMEM119Q4V9L6 283 aa5.51□□□□□ -1.53
PHC3-213ENST00000491258 UTP14CQ5TAP6 766 aaKnown RBP5.51□□□□□ -1.53
PHC3-213ENST00000491258 RHOT1Q8IXI2 618 aa5.51□□□□□ -1.53
PHC3-213ENST00000491258 ADGRG5Q8IZF4 528 aa5.51□□□□□ -1.53
PHC3-213ENST00000491258 B3GALNT2Q8NCR0 500 aa5.51□□□□□ -1.53
PHC3-213ENST00000491258 RAB24Q969Q5 203 aa5.51□□□□□ -1.53
PHC3-213ENST00000491258 VSX1Q9NZR4 365 aaPredicted RBP5.51□□□□□ -1.53
PHC3-213ENST00000491258 FLRT1Q9NZU1 646 aa5.51□□□□□ -1.53
PHC3-213ENST00000491258 CTTNBP2NLQ9P2B4 639 aa5.51□□□□□ -1.53
PHC3-213ENST00000491258 PADI4Q9UM07 663 aa5.51□□□□□ -1.53
PHC3-213ENST00000491258 NEU2Q9Y3R4 380 aa5.51□□□□□ -1.53
PHC3-213ENST00000491258 ZNF804BA4D1E1 1349 aa5.5□□□□□ -1.53
PHC3-213ENST00000491258 LINC01548A6NM66 108 aa5.5□□□□□ -1.53
PHC3-213ENST00000491258 MTNR1BP49286 362 aa5.5□□□□□ -1.53
PHC3-213ENST00000491258 ANXA11P50995 505 aaKnown RBP5.5□□□□□ -1.53
PHC3-213ENST00000491258 TAF7LQ5H9L4 462 aa5.5□□□□□ -1.53
PHC3-213ENST00000491258 DCBLD1Q8N8Z6 715 aa5.5□□□□□ -1.53
PHC3-213ENST00000491258 NSUN7Q8NE18 718 aaKnown RBP5.5□□□□□ -1.53
PHC3-213ENST00000491258 SNX19Q92543 992 aa5.5□□□□□ -1.53
PHC3-213ENST00000491258 AHCYL2Q96HN2 611 aaKnown RBP5.5□□□□□ -1.53
PHC3-213ENST00000491258 SLC2A13Q96QE2 648 aa5.5□□□□□ -1.53
PHC3-213ENST00000491258 GCOM1H8Y6P7 765 aaPredicted RBP5.49□□□□□ -1.53
PHC3-213ENST00000491258 GRM6O15303 877 aa5.49□□□□□ -1.53
PHC3-213ENST00000491258 BRINP1O60477 761 aa5.49□□□□□ -1.53
PHC3-213ENST00000491258 SUN1O94901 812 aa5.49□□□□□ -1.53
PHC3-213ENST00000491258 PRR35P0CG20 571 aa5.49□□□□□ -1.53
PHC3-213ENST00000491258 MTHFD1P11586 935 aaKnown RBP5.49□□□□□ -1.53
PHC3-213ENST00000491258 GYS2P54840 703 aa5.49□□□□□ -1.53
PHC3-213ENST00000491258 MC2RQ01718 297 aa5.49□□□□□ -1.53
PHC3-213ENST00000491258 EIF2B5Q13144 721 aaKnown RBP5.49□□□□□ -1.53
PHC3-213ENST00000491258 ZNF626Q68DY1 528 aa5.49□□□□□ -1.53
PHC3-213ENST00000491258 SUMO4Q6EEV6 95 aa5.49□□□□□ -1.53
PHC3-213ENST00000491258 NRG4Q8WWG1 115 aa5.49□□□□□ -1.53
PHC3-213ENST00000491258 ZBTB9Q96C00 473 aa5.49□□□□□ -1.53
PHC3-213ENST00000491258 TMX3Q96JJ7 454 aa5.49□□□□□ -1.53
PHC3-213ENST00000491258 NR2E3Q9Y5X4 410 aa5.49□□□□□ -1.53
PHC3-213ENST00000491258 CCDC195A0A1B0GUA6 201 aa5.48□□□□□ -1.53
PHC3-213ENST00000491258 TP73O15350 636 aa5.48□□□□□ -1.53
PHC3-213ENST00000491258 URI1O94763 535 aaPredicted RBP5.48□□□□□ -1.53
PHC3-213ENST00000491258 BMP15O95972 392 aa5.48□□□□□ -1.53
PHC3-213ENST00000491258 SBK3P0C264 359 aa5.48□□□□□ -1.53
PHC3-213ENST00000491258 HNRNPMP52272 730 aaKnown RBP eCLIP5.48□□□□□ -1.53
PHC3-213ENST00000491258 KRTAP10-7P60409 375 aaPredicted RBP5.48□□□□□ -1.53
PHC3-213ENST00000491258 FAPQ12884 760 aa5.48□□□□□ -1.53
PHC3-213ENST00000491258 STAT4Q14765 748 aa5.48□□□□□ -1.53
PHC3-213ENST00000491258 ZNF782Q6ZMW2 699 aaPredicted RBP5.48□□□□□ -1.53
PHC3-213ENST00000491258 RSPH3Q86UC2 560 aa5.48□□□□□ -1.53
PHC3-213ENST00000491258 CAMKK1Q8N5S9 505 aa5.48□□□□□ -1.53
PHC3-213ENST00000491258 KLHL32Q96NJ5 620 aa5.48□□□□□ -1.53
PHC3-213ENST00000491258 PACSIN1Q9BY11 444 aa5.48□□□□□ -1.53
PHC3-213ENST00000491258 INTUQ9ULD6 942 aa5.48□□□□□ -1.53
PHC3-213ENST00000491258 GPR45Q9Y5Y3 372 aa5.48□□□□□ -1.53
PHC3-213ENST00000491258 VWC2LB2RUY7 222 aa5.47□□□□□ -1.53
PHC3-213ENST00000491258 ENPP3O14638 875 aa5.47□□□□□ -1.53
PHC3-213ENST00000491258 TTLL1O95922 423 aa5.47□□□□□ -1.53
PHC3-213ENST00000491258 PTGER1P34995 402 aa5.47□□□□□ -1.53
PHC3-213ENST00000491258 SOX5P35711 763 aa5.47□□□□□ -1.53
PHC3-213ENST00000491258 NXPH1P58417 271 aa5.47□□□□□ -1.53
PHC3-213ENST00000491258 ITIH3Q06033 890 aa5.47□□□□□ -1.53
PHC3-213ENST00000491258 PABPC1LQ4VXU2 614 aaKnown RBP5.47□□□□□ -1.53
PHC3-213ENST00000491258 PPM1NQ8N819 430 aa5.47□□□□□ -1.53
PHC3-213ENST00000491258 SEMA6DQ8NFY4 1073 aa5.47□□□□□ -1.53
PHC3-213ENST00000491258 FCRL4Q96PJ5 515 aa5.47□□□□□ -1.53
PHC3-213ENST00000491258 IMPG2Q9BZV3 1241 aa5.47□□□□□ -1.53
PHC3-213ENST00000491258 CAAP1Q9H8G2 361 aa5.47□□□□□ -1.53
PHC3-213ENST00000491258 KLC4Q9NSK0 619 aa5.47□□□□□ -1.53
PHC3-213ENST00000491258 PRKD3O94806 890 aa5.46□□□□□ -1.54
PHC3-213ENST00000491258 IGKV2-30P06310 120 aa5.46□□□□□ -1.54
PHC3-213ENST00000491258 NR2F6P10588 404 aa5.46□□□□□ -1.54
PHC3-213ENST00000491258 KELP23276 732 aa5.46□□□□□ -1.54
PHC3-213ENST00000491258 SSBP2P81877 361 aaPredicted RBP5.46□□□□□ -1.54
PHC3-213ENST00000491258 TFF2Q03403 129 aa5.46□□□□□ -1.54
PHC3-213ENST00000491258 PIGFQ07326 219 aa5.46□□□□□ -1.54
PHC3-213ENST00000491258 TARDBPQ13148 414 aaKnown RBP eCLIP5.46□□□□□ -1.54
PHC3-213ENST00000491258 KLF9Q13886 244 aaPredicted RBP5.46□□□□□ -1.54
PHC3-213ENST00000491258 CT47A1Q5JQC4 288 aaPredicted RBP5.46□□□□□ -1.54
PHC3-213ENST00000491258 C11orf87Q6NUJ2 197 aa5.46□□□□□ -1.54
PHC3-213ENST00000491258 CFAP52Q8N1V2 620 aa5.46□□□□□ -1.54
PHC3-213ENST00000491258 SLC17A8Q8NDX2 589 aa5.46□□□□□ -1.54
PHC3-213ENST00000491258 FBXO41Q8TF61 875 aa5.46□□□□□ -1.54
PHC3-213ENST00000491258 KRTAP1-5Q9BYS1 174 aa5.46□□□□□ -1.54
PHC3-213ENST00000491258 TDP1Q9NUW8 608 aa5.46□□□□□ -1.54
PHC3-213ENST00000491258 JKAMPQ9P055 326 aa5.46□□□□□ -1.54
PHC3-213ENST00000491258 ADGRA2Q96PE1 1338 aa5.46□□□□□ -1.54
PHC3-213ENST00000491258 WDR27A2RRH5 827 aa5.45□□□□□ -1.54
PHC3-213ENST00000491258 HNRNPCP07910 306 aaKnown RBP eCLIP5.45□□□□□ -1.54
PHC3-213ENST00000491258 EBLN1P0CF75 366 aa5.45□□□□□ -1.54
PHC3-213ENST00000491258 NPTX2P47972 431 aa5.45□□□□□ -1.54
PHC3-213ENST00000491258 TUBA4AP68366 448 aa5.45□□□□□ -1.54
PHC3-213ENST00000491258 HLXQ14774 488 aaPredicted RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms