RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 RNF208Q9H0X6 261 aa14.9□□□□□ -0.02
SMPD4-219ENST00000491128 EHD2Q9NZN4 543 aa14.9□□□□□ -0.02
SMPD4-219ENST00000491128 PCDHB2Q9Y5E7 798 aa14.9□□□□□ -0.02
SMPD4-219ENST00000491128 SMIM28A0A1B0GU29 152 aa14.9□□□□□ -0.02
SMPD4-219ENST00000491128 THAP12O43422 761 aa14.9□□□□□ -0.02
SMPD4-219ENST00000491128 AP3M2P53677 418 aa14.9□□□□□ -0.02
SMPD4-219ENST00000491128 CDR2Q01850 454 aa14.9□□□□□ -0.02
SMPD4-219ENST00000491128 MGAT3Q09327 533 aa14.9□□□□□ -0.02
SMPD4-219ENST00000491128 ZNF667Q5HYK9 610 aa14.9□□□□□ -0.02
SMPD4-219ENST00000491128 SLC35G2Q8TBE7 412 aa14.9□□□□□ -0.02
SMPD4-219ENST00000491128 BTBD6Q96KE9 485 aa14.9□□□□□ -0.02
SMPD4-219ENST00000491128 NOX5Q96PH1 765 aa14.9□□□□□ -0.02
SMPD4-219ENST00000491128 COG5Q9UP83 839 aa14.9□□□□□ -0.02
SMPD4-219ENST00000491128 TACC1O75410 805 aa14.89□□□□□ -0.03
SMPD4-219ENST00000491128 GNRH1P01148 92 aa14.89□□□□□ -0.03
SMPD4-219ENST00000491128 TFAP2BQ92481 460 aa14.89□□□□□ -0.03
SMPD4-219ENST00000491128 LPIN3Q9BQK8 851 aa14.89□□□□□ -0.03
SMPD4-219ENST00000491128 L2HGDHQ9H9P8 463 aa14.89□□□□□ -0.03
SMPD4-219ENST00000491128 MRFAP1Q9Y605 127 aa14.89□□□□□ -0.03
SMPD4-219ENST00000491128 CASP8AP2Q9UKL3 1982 aa14.89□□□□□ -0.03
SMPD4-219ENST00000491128 GRID2IPA4D2P6 1211 aa14.89□□□□□ -0.03
SMPD4-219ENST00000491128 MLH1P40692 756 aa14.89□□□□□ -0.03
SMPD4-219ENST00000491128 RNASE9P60153 205 aaKnown RBP14.89□□□□□ -0.03
SMPD4-219ENST00000491128 LPIN1Q14693 890 aa14.89□□□□□ -0.03
SMPD4-219ENST00000491128 NAA35Q5VZE5 725 aa14.89□□□□□ -0.03
SMPD4-219ENST00000491128 ZNF662Q6ZS27 426 aa14.89□□□□□ -0.03
SMPD4-219ENST00000491128 ENOSF1Q7L5Y1 443 aa14.89□□□□□ -0.03
SMPD4-219ENST00000491128 CPNE8Q86YQ8 564 aa14.89□□□□□ -0.03
SMPD4-219ENST00000491128 LUC7LQ9NQ29 371 aaKnown RBP14.89□□□□□ -0.03
SMPD4-219ENST00000491128 SAGE1Q9NXZ1 904 aa14.89□□□□□ -0.03
SMPD4-219ENST00000491128 PTPN22Q9Y2R2 807 aa14.89□□□□□ -0.03
SMPD4-219ENST00000491128 TMEM110-MUSTN1A8MSY1 372 aa14.88□□□□□ -0.03
SMPD4-219ENST00000491128 FBXO47Q5MNV8 452 aa14.88□□□□□ -0.03
SMPD4-219ENST00000491128 CTNNBL1Q8WYA6 563 aaPredicted RBP14.88□□□□□ -0.03
SMPD4-219ENST00000491128 GAD1Q99259 594 aa14.88□□□□□ -0.03
SMPD4-219ENST00000491128 MIOSQ9NXC5 875 aa14.88□□□□□ -0.03
SMPD4-219ENST00000491128 SNX9Q9Y5X1 595 aa14.88□□□□□ -0.03
SMPD4-219ENST00000491128 GJB6O95452 261 aa14.88□□□□□ -0.03
SMPD4-219ENST00000491128 CD19P15391 556 aa14.88□□□□□ -0.03
SMPD4-219ENST00000491128 TBXAS1P24557 533 aaPredicted RBP14.88□□□□□ -0.03
SMPD4-219ENST00000491128 MBTPS1Q14703 1052 aa14.88□□□□□ -0.03
SMPD4-219ENST00000491128 ALKAL1Q6UXT8 129 aa14.88□□□□□ -0.03
SMPD4-219ENST00000491128 TRIM58Q8NG06 486 aa14.88□□□□□ -0.03
SMPD4-219ENST00000491128 COG1Q8WTW3 980 aa14.88□□□□□ -0.03
SMPD4-219ENST00000491128 FAM105AQ9NUU6 356 aa14.88□□□□□ -0.03
SMPD4-219ENST00000491128 CKBP12277 381 aa14.87□□□□□ -0.03
SMPD4-219ENST00000491128 ZNF606Q8WXB4 792 aa14.87□□□□□ -0.03
SMPD4-219ENST00000491128 TRIM7Q9C029 511 aa14.87□□□□□ -0.03
SMPD4-219ENST00000491128 C2CD2Q9Y426 696 aa14.87□□□□□ -0.03
SMPD4-219ENST00000491128 SPTLC1O15269 473 aa14.87□□□□□ -0.03
SMPD4-219ENST00000491128 SLU7O95391 586 aaKnown RBP14.87□□□□□ -0.03
SMPD4-219ENST00000491128 TUBB4AP04350 444 aa14.87□□□□□ -0.03
SMPD4-219ENST00000491128 AXLP30530 894 aa14.87□□□□□ -0.03
SMPD4-219ENST00000491128 AMPD2Q01433 879 aa14.87□□□□□ -0.03
SMPD4-219ENST00000491128 PAK2Q13177 524 aa14.87□□□□□ -0.03
SMPD4-219ENST00000491128 ARHGEF6Q15052 776 aa14.87□□□□□ -0.03
SMPD4-219ENST00000491128 TRIM71Q2Q1W2 868 aaKnown RBP14.87□□□□□ -0.03
SMPD4-219ENST00000491128 UBR7Q8N806 425 aa14.87□□□□□ -0.03
SMPD4-219ENST00000491128 ADAM2Q99965 735 aa14.87□□□□□ -0.03
SMPD4-219ENST00000491128 TLR10Q9BXR5 811 aa14.87□□□□□ -0.03
SMPD4-219ENST00000491128 CTTNBP2NLQ9P2B4 639 aa14.87□□□□□ -0.03
SMPD4-219ENST00000491128 TRIP11Q15643 1979 aa14.87□□□□□ -0.03
SMPD4-219ENST00000491128 MOXD2PA6NHM9 499 aa14.86□□□□□ -0.03
SMPD4-219ENST00000491128 KBTBD13C9JR72 458 aa14.86□□□□□ -0.03
SMPD4-219ENST00000491128 PTGESO14684 152 aa14.86□□□□□ -0.03
SMPD4-219ENST00000491128 PQBP1O60828 265 aaKnown RBP14.86□□□□□ -0.03
SMPD4-219ENST00000491128 RBP5P82980 135 aa14.86□□□□□ -0.03
SMPD4-219ENST00000491128 ZBTB6Q15916 424 aa14.86□□□□□ -0.03
SMPD4-219ENST00000491128 ERCC6LQ2NKX8 1250 aa14.86□□□□□ -0.03
SMPD4-219ENST00000491128 DAAM2Q86T65 1068 aa14.86□□□□□ -0.03
SMPD4-219ENST00000491128 C12orf29Q8N999 325 aa14.86□□□□□ -0.03
SMPD4-219ENST00000491128 MS4A14Q96JA4 679 aa14.86□□□□□ -0.03
SMPD4-219ENST00000491128 ALS2CR12Q96Q35 445 aa14.86□□□□□ -0.03
SMPD4-219ENST00000491128 PAAF1Q9BRP4 392 aa14.86□□□□□ -0.03
SMPD4-219ENST00000491128 CNTN3Q9P232 1028 aa14.86□□□□□ -0.03
SMPD4-219ENST00000491128 ANK1P16157 1881 aa14.86□□□□□ -0.03
SMPD4-219ENST00000491128 BUB1BO60566 1050 aaPredicted RBP14.86□□□□□ -0.03
SMPD4-219ENST00000491128 CCL5P13501 91 aa14.86□□□□□ -0.03
SMPD4-219ENST00000491128 ZSCAN20P17040 1043 aaPredicted RBP14.86□□□□□ -0.03
SMPD4-219ENST00000491128 PTK7Q13308 1070 aa14.86□□□□□ -0.03
SMPD4-219ENST00000491128 CLEC16AQ2KHT3 1053 aa14.86□□□□□ -0.03
SMPD4-219ENST00000491128 PAN2Q504Q3 1202 aaKnown RBP14.86□□□□□ -0.03
SMPD4-219ENST00000491128 DAB2IPQ5VWQ8 1189 aa14.86□□□□□ -0.03
SMPD4-219ENST00000491128 MNS1Q8NEH6 495 aa14.86□□□□□ -0.03
SMPD4-219ENST00000491128 TPCN2Q8NHX9 752 aa14.86□□□□□ -0.03
SMPD4-219ENST00000491128 WHAMMQ8TF30 809 aa14.86□□□□□ -0.03
SMPD4-219ENST00000491128 ZNF653Q96CK0 615 aa14.86□□□□□ -0.03
SMPD4-219ENST00000491128 HINFPQ9BQA5 517 aa14.86□□□□□ -0.03
SMPD4-219ENST00000491128 MRPL45Q9BRJ2 306 aaKnown RBP14.86□□□□□ -0.03
SMPD4-219ENST00000491128 C11orf70Q9BRQ4 267 aa14.86□□□□□ -0.03
SMPD4-219ENST00000491128 ELOVL4Q9GZR5 314 aa14.86□□□□□ -0.03
SMPD4-219ENST00000491128 ISCUQ9H1K1 167 aa14.86□□□□□ -0.03
SMPD4-219ENST00000491128 RNF216Q9NWF9 866 aaPredicted RBP14.86□□□□□ -0.03
SMPD4-219ENST00000491128 WBP1LQ9NX94 342 aa14.86□□□□□ -0.03
SMPD4-219ENST00000491128 CDC23Q9UJX2 597 aa14.86□□□□□ -0.03
SMPD4-219ENST00000491128 ITGA11Q9UKX5 1188 aa14.86□□□□□ -0.03
SMPD4-219ENST00000491128 INPP5FQ9Y2H2 1132 aa14.86□□□□□ -0.03
SMPD4-219ENST00000491128 DAAM1Q9Y4D1 1078 aa14.86□□□□□ -0.03
SMPD4-219ENST00000491128 SAR1BQ9Y6B6 198 aa14.86□□□□□ -0.03
SMPD4-219ENST00000491128 MYH10P35580 1976 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms