RNA–Protein interactions for RNA: ENST00000491052.5

LIMK1-207, Transcript of LIM domain kinase 1, humanhuman

TSL 4

Gene LIMK1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-207ENST00000491052 CASP10Q92851 521 aa13.85□□□□□ -0.19
LIMK1-207ENST00000491052 MFSD14AQ96MC6 490 aa13.85□□□□□ -0.19
LIMK1-207ENST00000491052 POP1Q99575 1024 aaKnown RBP13.85□□□□□ -0.19
LIMK1-207ENST00000491052 RXFP1Q9HBX9 757 aa13.85□□□□□ -0.19
LIMK1-207ENST00000491052 CTNND2Q9UQB3 1225 aa13.85□□□□□ -0.19
LIMK1-207ENST00000491052 TRIM49BA6NDI0 452 aa13.84□□□□□ -0.19
LIMK1-207ENST00000491052 SPTLC1O15269 473 aa13.84□□□□□ -0.19
LIMK1-207ENST00000491052 AKAP3O75969 853 aa13.84□□□□□ -0.19
LIMK1-207ENST00000491052 GLUD1P00367 558 aa13.84□□□□□ -0.19
LIMK1-207ENST00000491052 ODC1P11926 461 aa13.84□□□□□ -0.19
LIMK1-207ENST00000491052 PNPLA4P41247 253 aa13.84□□□□□ -0.19
LIMK1-207ENST00000491052 AARSP49588 968 aaKnown RBP eCLIP13.84□□□□□ -0.19
LIMK1-207ENST00000491052 CLCN4P51793 760 aa13.84□□□□□ -0.19
LIMK1-207ENST00000491052 PMS1P54277 932 aaKnown RBP13.84□□□□□ -0.19
LIMK1-207ENST00000491052 MRPS5P82675 430 aaKnown RBP13.84□□□□□ -0.19
LIMK1-207ENST00000491052 LRRC63Q05C16 580 aa13.84□□□□□ -0.19
LIMK1-207ENST00000491052 USP37Q86T82 979 aa13.84□□□□□ -0.19
LIMK1-207ENST00000491052 PALB2Q86YC2 1186 aa13.84□□□□□ -0.19
LIMK1-207ENST00000491052 FAM186BQ8IYM0 893 aa13.84□□□□□ -0.19
LIMK1-207ENST00000491052 SLC22A17Q8WUG5 538 aa13.84□□□□□ -0.19
LIMK1-207ENST00000491052 ATXN2LQ8WWM7 1075 aaKnown RBP13.84□□□□□ -0.19
LIMK1-207ENST00000491052 EEF2KMTQ96G04 330 aa13.84□□□□□ -0.19
LIMK1-207ENST00000491052 DHTKD1Q96HY7 919 aaPredicted RBP13.84□□□□□ -0.19
LIMK1-207ENST00000491052 SENP8Q96LD8 212 aa13.84□□□□□ -0.19
LIMK1-207ENST00000491052 CLEC1BQ9P126 229 aa13.84□□□□□ -0.19
LIMK1-207ENST00000491052 FNIP2Q9P278 1114 aa13.84□□□□□ -0.19
LIMK1-207ENST00000491052 MTRRQ9UBK8 725 aa13.84□□□□□ -0.19
LIMK1-207ENST00000491052 CD207Q9UJ71 328 aa13.84□□□□□ -0.19
LIMK1-207ENST00000491052 TIMM13Q9Y5L4 95 aaPredicted RBP13.84□□□□□ -0.19
LIMK1-207ENST00000491052 PTPRDP23468 1912 aa13.84□□□□□ -0.19
LIMK1-207ENST00000491052 ARHGEF37A1IGU5 675 aa13.83□□□□□ -0.2
LIMK1-207ENST00000491052 LRRIQ3A6PVS8 624 aaPredicted RBP13.83□□□□□ -0.2
LIMK1-207ENST00000491052 H7C4K7 107 aa13.83□□□□□ -0.2
LIMK1-207ENST00000491052 M0QZQ0 153 aa13.83□□□□□ -0.2
LIMK1-207ENST00000491052 CETN3O15182 167 aa13.83□□□□□ -0.2
LIMK1-207ENST00000491052 PHACTR2O75167 634 aa13.83□□□□□ -0.2
LIMK1-207ENST00000491052 CLSTN1O94985 981 aa13.83□□□□□ -0.2
LIMK1-207ENST00000491052 MBD3O95983 291 aa13.83□□□□□ -0.2
LIMK1-207ENST00000491052 KRT13P13646 458 aa13.83□□□□□ -0.2
LIMK1-207ENST00000491052 PAX3P23760 479 aa13.83□□□□□ -0.2
LIMK1-207ENST00000491052 CCNE1P24864 410 aa13.83□□□□□ -0.2
LIMK1-207ENST00000491052 OR1D2P34982 312 aa13.83□□□□□ -0.2
LIMK1-207ENST00000491052 PSMC2P35998 433 aaKnown RBP13.83□□□□□ -0.2
LIMK1-207ENST00000491052 KCNQ1P51787 676 aa13.83□□□□□ -0.2
LIMK1-207ENST00000491052 RBP5P82980 135 aa13.83□□□□□ -0.2
LIMK1-207ENST00000491052 YWHAHQ04917 246 aaPredicted RBP13.83□□□□□ -0.2
LIMK1-207ENST00000491052 BIRC3Q13489 604 aa13.83□□□□□ -0.2
LIMK1-207ENST00000491052 KCNC3Q14003 757 aa13.83□□□□□ -0.2
LIMK1-207ENST00000491052 LEXMQ3ZCV2 418 aa13.83□□□□□ -0.2
LIMK1-207ENST00000491052 CTXN3Q4LDR2 81 aa13.83□□□□□ -0.2
LIMK1-207ENST00000491052 ANKRD40Q6AI12 368 aa13.83□□□□□ -0.2
LIMK1-207ENST00000491052 ZNF280DQ6N043 979 aa13.83□□□□□ -0.2
LIMK1-207ENST00000491052 ANKRD54Q6NXT1 300 aa13.83□□□□□ -0.2
LIMK1-207ENST00000491052 TRAPPC11Q7Z392 1133 aa13.83□□□□□ -0.2
LIMK1-207ENST00000491052 LRRC52Q8N7C0 313 aa13.83□□□□□ -0.2
LIMK1-207ENST00000491052 PLEKHO2Q8TD55 490 aa13.83□□□□□ -0.2
LIMK1-207ENST00000491052 PARD3BQ8TEW8 1205 aa13.83□□□□□ -0.2
LIMK1-207ENST00000491052 NELFBQ8WX92 580 aa13.83□□□□□ -0.2
LIMK1-207ENST00000491052 CLSTN3Q9BQT9 956 aa13.83□□□□□ -0.2
LIMK1-207ENST00000491052 APOL5Q9BWW9 433 aa13.83□□□□□ -0.2
LIMK1-207ENST00000491052 GZF1Q9H116 711 aaPredicted RBP13.83□□□□□ -0.2
LIMK1-207ENST00000491052 MAN1C1Q9NR34 630 aa13.83□□□□□ -0.2
LIMK1-207ENST00000491052 DZANK1Q9NVP4 752 aa13.83□□□□□ -0.2
LIMK1-207ENST00000491052 SIX4Q9UIU6 781 aa13.83□□□□□ -0.2
LIMK1-207ENST00000491052 BACE2Q9Y5Z0 518 aa13.83□□□□□ -0.2
LIMK1-207ENST00000491052 CDY1Q9Y6F8 540 aa13.83□□□□□ -0.2
LIMK1-207ENST00000491052 KPNA7A9QM74 516 aa13.82□□□□□ -0.2
LIMK1-207ENST00000491052 PPP1R3GB7ZBB8 358 aa13.82□□□□□ -0.2
LIMK1-207ENST00000491052 CYB561D2O14569 222 aa13.82□□□□□ -0.2
LIMK1-207ENST00000491052 MAPK13O15264 365 aa13.82□□□□□ -0.2
LIMK1-207ENST00000491052 ADAM12O43184 909 aa13.82□□□□□ -0.2
LIMK1-207ENST00000491052 SPATA31D3P0C874 917 aa13.82□□□□□ -0.2
LIMK1-207ENST00000491052 EPB41P11171 864 aaKnown RBP13.82□□□□□ -0.2
LIMK1-207ENST00000491052 VAMP7P51809 220 aa13.82□□□□□ -0.2
LIMK1-207ENST00000491052 ARPP19P56211 112 aa13.82□□□□□ -0.2
LIMK1-207ENST00000491052 STX17P56962 302 aa13.82□□□□□ -0.2
LIMK1-207ENST00000491052 DLG4P78352 724 aa13.82□□□□□ -0.2
LIMK1-207ENST00000491052 MYO1EQ12965 1108 aa13.82□□□□□ -0.2
LIMK1-207ENST00000491052 PAK1Q13153 545 aa13.82□□□□□ -0.2
LIMK1-207ENST00000491052 SCARA3Q6AZY7 606 aa13.82□□□□□ -0.2
LIMK1-207ENST00000491052 OVOS1Q6IE37 1185 aa13.82□□□□□ -0.2
LIMK1-207ENST00000491052 PTCRAQ6ISU1 281 aaPredicted RBP13.82□□□□□ -0.2
LIMK1-207ENST00000491052 ELMSAN1Q6PJG2 1045 aa13.82□□□□□ -0.2
LIMK1-207ENST00000491052 TMEM184AQ6ZMB5 413 aa13.82□□□□□ -0.2
LIMK1-207ENST00000491052 SPATA31D4Q6ZUB0 917 aa13.82□□□□□ -0.2
LIMK1-207ENST00000491052 INTS8Q75QN2 995 aaKnown RBP13.82□□□□□ -0.2
LIMK1-207ENST00000491052 TMC2Q8TDI7 906 aa13.82□□□□□ -0.2
LIMK1-207ENST00000491052 ZNF516Q92618 1163 aa13.82□□□□□ -0.2
LIMK1-207ENST00000491052 HPDLQ96IR7 371 aa13.82□□□□□ -0.2
LIMK1-207ENST00000491052 MSLNLQ96KJ4 702 aa13.82□□□□□ -0.2
LIMK1-207ENST00000491052 ASB2Q96Q27 587 aa13.82□□□□□ -0.2
LIMK1-207ENST00000491052 DOCK8Q8NF50 2099 aa13.81□□□□□ -0.2
LIMK1-207ENST00000491052 BICDL2A1A5D9 508 aa13.81□□□□□ -0.2
LIMK1-207ENST00000491052 TGM5O43548 720 aa13.81□□□□□ -0.2
LIMK1-207ENST00000491052 TRIM49P0CI25 452 aa13.81□□□□□ -0.2
LIMK1-207ENST00000491052 TRIM49CP0CI26 452 aa13.81□□□□□ -0.2
LIMK1-207ENST00000491052 TYMPP19971 482 aa13.81□□□□□ -0.2
LIMK1-207ENST00000491052 AP3M2P53677 418 aa13.81□□□□□ -0.2
LIMK1-207ENST00000491052 FKBP3Q00688 224 aaKnown RBP13.81□□□□□ -0.2
LIMK1-207ENST00000491052 SMAD4Q13485 552 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms