RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 BCAR1P56945 870 aa20■□□□□ 0.79
MCF2L-230ENST00000491028 LILRA4P59901 499 aa20■□□□□ 0.79
MCF2L-230ENST00000491028 TNNC1P63316 161 aa20■□□□□ 0.79
MCF2L-230ENST00000491028 GCNT1Q02742 428 aa20■□□□□ 0.79
MCF2L-230ENST00000491028 SPOUT1Q5T280 376 aaKnown RBP20■□□□□ 0.79
MCF2L-230ENST00000491028 KLHDC7AQ5VTJ3 777 aa20■□□□□ 0.79
MCF2L-230ENST00000491028 SMYD5Q6GMV2 418 aa20■□□□□ 0.79
MCF2L-230ENST00000491028 SPOPLQ6IQ16 392 aa20■□□□□ 0.79
MCF2L-230ENST00000491028 ENOSF1Q7L5Y1 443 aa20■□□□□ 0.79
MCF2L-230ENST00000491028 C3orf58Q8NDZ4 430 aa20■□□□□ 0.79
MCF2L-230ENST00000491028 ZNF558Q96NG5 402 aa20■□□□□ 0.79
MCF2L-230ENST00000491028 APOBEC3GQ9HC16 384 aaKnown RBP20■□□□□ 0.79
MCF2L-230ENST00000491028 AAASQ9NRG9 546 aa20■□□□□ 0.79
MCF2L-230ENST00000491028 PRG3Q9Y2Y8 225 aaPredicted RBP20■□□□□ 0.79
MCF2L-230ENST00000491028 NUB1Q9Y5A7 615 aa20■□□□□ 0.79
MCF2L-230ENST00000491028 NLRC5Q86WI3 1866 aa19.99■□□□□ 0.79
MCF2L-230ENST00000491028 ARHGEF37A1IGU5 675 aa19.99■□□□□ 0.79
MCF2L-230ENST00000491028 UCHL3P15374 230 aa19.99■□□□□ 0.79
MCF2L-230ENST00000491028 TRIM21P19474 475 aaKnown RBP19.99■□□□□ 0.79
MCF2L-230ENST00000491028 LRMPQ12912 555 aa19.99■□□□□ 0.79
MCF2L-230ENST00000491028 PTPN21Q16825 1174 aa19.99■□□□□ 0.79
MCF2L-230ENST00000491028 WDR72Q3MJ13 1102 aa19.99■□□□□ 0.79
MCF2L-230ENST00000491028 PHLDB3Q6NSJ2 640 aa19.99■□□□□ 0.79
MCF2L-230ENST00000491028 ARHGEF19Q8IW93 802 aa19.99■□□□□ 0.79
MCF2L-230ENST00000491028 TDHQ8IZJ6 230 aa19.99■□□□□ 0.79
MCF2L-230ENST00000491028 PPM1KQ8N3J5 372 aa19.99■□□□□ 0.79
MCF2L-230ENST00000491028 CLP1Q92989 425 aaKnown RBP19.99■□□□□ 0.79
MCF2L-230ENST00000491028 JAKMIP2Q96AA8 810 aa19.99■□□□□ 0.79
MCF2L-230ENST00000491028 EDEM3Q9BZQ6 932 aa19.99■□□□□ 0.79
MCF2L-230ENST00000491028 FAM124BQ9H5Z6 455 aaPredicted RBP19.99■□□□□ 0.79
MCF2L-230ENST00000491028 CEP72Q9P209 647 aa19.99■□□□□ 0.79
MCF2L-230ENST00000491028 ADAM28Q9UKQ2 775 aa19.99■□□□□ 0.79
MCF2L-230ENST00000491028 RWDD3Q9Y3V2 267 aa19.99■□□□□ 0.79
MCF2L-230ENST00000491028 PCDHA11Q9Y5I1 949 aa19.99■□□□□ 0.79
MCF2L-230ENST00000491028 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.98■□□□□ 0.79
MCF2L-230ENST00000491028 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.98■□□□□ 0.79
MCF2L-230ENST00000491028 SPTLC1O15269 473 aa19.98■□□□□ 0.79
MCF2L-230ENST00000491028 TRAPPC3O43617 180 aa19.98■□□□□ 0.79
MCF2L-230ENST00000491028 NOL4O94818 638 aa19.98■□□□□ 0.79
MCF2L-230ENST00000491028 PPM1AP35813 382 aa19.98■□□□□ 0.79
MCF2L-230ENST00000491028 MFAP3P55082 362 aa19.98■□□□□ 0.79
MCF2L-230ENST00000491028 CUL2Q13617 745 aa19.98■□□□□ 0.79
MCF2L-230ENST00000491028 KCNT2Q6UVM3 1135 aa19.98■□□□□ 0.79
MCF2L-230ENST00000491028 CD300LGQ6UXG3 332 aa19.98■□□□□ 0.79
MCF2L-230ENST00000491028 DPH6Q7L8W6 267 aa19.98■□□□□ 0.79
MCF2L-230ENST00000491028 TMC6Q7Z403 805 aa19.98■□□□□ 0.79
MCF2L-230ENST00000491028 COLGALT1Q8NBJ5 622 aa19.98■□□□□ 0.79
MCF2L-230ENST00000491028 RABGGTAQ92696 567 aa19.98■□□□□ 0.79
MCF2L-230ENST00000491028 TATDN2Q93075 761 aa19.98■□□□□ 0.79
MCF2L-230ENST00000491028 BCO2Q9BYV7 579 aa19.98■□□□□ 0.79
MCF2L-230ENST00000491028 TTYH3Q9C0H2 523 aa19.98■□□□□ 0.79
MCF2L-230ENST00000491028 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.98■□□□□ 0.79
MCF2L-230ENST00000491028 MARCH5Q9NX47 278 aa19.98■□□□□ 0.79
MCF2L-230ENST00000491028 SNX9Q9Y5X1 595 aa19.98■□□□□ 0.79
MCF2L-230ENST00000491028 TSC2P49815 1807 aa19.97■□□□□ 0.79
MCF2L-230ENST00000491028 TADA2AO75478 443 aa19.97■□□□□ 0.79
MCF2L-230ENST00000491028 FAM163BP0C2L3 166 aa19.97■□□□□ 0.79
MCF2L-230ENST00000491028 LINC00271P0C7V0 271 aa19.97■□□□□ 0.79
MCF2L-230ENST00000491028 ASPAP45381 313 aa19.97■□□□□ 0.79
MCF2L-230ENST00000491028 YWHAEP62258 255 aaKnown RBP19.97■□□□□ 0.79
MCF2L-230ENST00000491028 ELAVL2Q12926 359 aaKnown RBP19.97■□□□□ 0.79
MCF2L-230ENST00000491028 DSTYKQ6XUX3 929 aa19.97■□□□□ 0.79
MCF2L-230ENST00000491028 TOP6BLQ8N6T0 577 aa19.97■□□□□ 0.79
MCF2L-230ENST00000491028 SUSD3Q96L08 255 aa19.97■□□□□ 0.79
MCF2L-230ENST00000491028 NAA15Q9BXJ9 866 aaKnown RBP19.97■□□□□ 0.79
MCF2L-230ENST00000491028 PRO3102Q9H379 93 aa19.97■□□□□ 0.79
MCF2L-230ENST00000491028 CYP3A43Q9HB55 503 aa19.97■□□□□ 0.79
MCF2L-230ENST00000491028 UBE2TQ9NPD8 197 aaPredicted RBP19.97■□□□□ 0.79
MCF2L-230ENST00000491028 NXF1Q9UBU9 619 aaKnown RBP19.97■□□□□ 0.79
MCF2L-230ENST00000491028 DNAJC12Q9UKB3 198 aa19.97■□□□□ 0.79
MCF2L-230ENST00000491028 PCDHB12Q9Y5F1 795 aa19.97■□□□□ 0.79
MCF2L-230ENST00000491028 FHOD1Q9Y613 1164 aa19.97■□□□□ 0.79
MCF2L-230ENST00000491028 CEP290O15078 2479 aa19.97■□□□□ 0.79
MCF2L-230ENST00000491028 SF3B1O75533 1304 aaKnown RBP eCLIP19.97■□□□□ 0.79
MCF2L-230ENST00000491028 A0A1W2PQJ5 194 aa19.96■□□□□ 0.79
MCF2L-230ENST00000491028 M0QZQ0 153 aa19.96■□□□□ 0.79
MCF2L-230ENST00000491028 EPHB6O15197 1021 aa19.96■□□□□ 0.79
MCF2L-230ENST00000491028 HUS1O60921 280 aa19.96■□□□□ 0.79
MCF2L-230ENST00000491028 ITGB1P05556 798 aa19.96■□□□□ 0.79
MCF2L-230ENST00000491028 TPM1P09493 284 aa19.96■□□□□ 0.79
MCF2L-230ENST00000491028 ODC1P11926 461 aa19.96■□□□□ 0.79
MCF2L-230ENST00000491028 RABGGTBP53611 331 aa19.96■□□□□ 0.79
MCF2L-230ENST00000491028 POLR2FP61218 127 aaKnown RBP19.96■□□□□ 0.79
MCF2L-230ENST00000491028 APBA1Q02410 837 aa19.96■□□□□ 0.79
MCF2L-230ENST00000491028 RAB30Q15771 203 aa19.96■□□□□ 0.79
MCF2L-230ENST00000491028 FAM109BQ6ICB4 259 aaPredicted RBP19.96■□□□□ 0.79
MCF2L-230ENST00000491028 IQCEQ6IPM2 695 aa19.96■□□□□ 0.79
MCF2L-230ENST00000491028 GJB7Q6PEY0 223 aa19.96■□□□□ 0.79
MCF2L-230ENST00000491028 CACNA2D4Q7Z3S7 1137 aa19.96■□□□□ 0.79
MCF2L-230ENST00000491028 LIMS2Q7Z4I7 341 aa19.96■□□□□ 0.79
MCF2L-230ENST00000491028 SLC39A11Q8N1S5 342 aa19.96■□□□□ 0.79
MCF2L-230ENST00000491028 TTC39CQ8N584 583 aa19.96■□□□□ 0.79
MCF2L-230ENST00000491028 SPATA18Q8TC71 538 aa19.96■□□□□ 0.79
MCF2L-230ENST00000491028 HASPINQ8TF76 798 aa19.96■□□□□ 0.79
MCF2L-230ENST00000491028 ELMO3Q96BJ8 720 aa19.96■□□□□ 0.79
MCF2L-230ENST00000491028 SENP8Q96LD8 212 aa19.96■□□□□ 0.79
MCF2L-230ENST00000491028 SPG21Q9NZD8 308 aa19.96■□□□□ 0.79
MCF2L-230ENST00000491028 POLIQ9UNA4 740 aa19.96■□□□□ 0.79
MCF2L-230ENST00000491028 LCHNA4D1U4 455 aa19.95■□□□□ 0.78
MCF2L-230ENST00000491028 LINC01553A4QN01 128 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms