RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 PPP3CAQ08209 521 aa20.5■□□□□ 0.87
SNAPC3-206ENST00000490969 RCN1Q15293 331 aa20.5■□□□□ 0.87
SNAPC3-206ENST00000490969 EPC2Q52LR7 807 aa20.5■□□□□ 0.87
SNAPC3-206ENST00000490969 IZUMO3Q5VZ72 239 aa20.5■□□□□ 0.87
SNAPC3-206ENST00000490969 DSTYKQ6XUX3 929 aa20.5■□□□□ 0.87
SNAPC3-206ENST00000490969 SLC9A9Q8IVB4 645 aa20.5■□□□□ 0.87
SNAPC3-206ENST00000490969 CADM1Q9BY67 442 aaKnown RBP20.5■□□□□ 0.87
SNAPC3-206ENST00000490969 KIAA1586Q9HCI6 787 aa20.5■□□□□ 0.87
SNAPC3-206ENST00000490969 CYLDQ9NQC7 956 aa20.5■□□□□ 0.87
SNAPC3-206ENST00000490969 SEL1LQ9UBV2 794 aa20.5■□□□□ 0.87
SNAPC3-206ENST00000490969 SMG5Q9UPR3 1016 aaKnown RBP20.5■□□□□ 0.87
SNAPC3-206ENST00000490969 R3HDM2Q9Y2K5 976 aaKnown RBP20.5■□□□□ 0.87
SNAPC3-206ENST00000490969 NEU2Q9Y3R4 380 aa20.5■□□□□ 0.87
SNAPC3-206ENST00000490969 ATRNL1Q5VV63 1379 aa20.5■□□□□ 0.87
SNAPC3-206ENST00000490969 WNT10BO00744 389 aa20.5■□□□□ 0.87
SNAPC3-206ENST00000490969 C2CD2LO14523 706 aa20.5■□□□□ 0.87
SNAPC3-206ENST00000490969 ENTPD3O75355 529 aa20.5■□□□□ 0.87
SNAPC3-206ENST00000490969 NPM3O75607 178 aaKnown RBP20.5■□□□□ 0.87
SNAPC3-206ENST00000490969 RPA3P35244 121 aaPredicted RBP20.5■□□□□ 0.87
SNAPC3-206ENST00000490969 MAGEA4P43358 317 aa20.5■□□□□ 0.87
SNAPC3-206ENST00000490969 FMO1Q01740 532 aa20.5■□□□□ 0.87
SNAPC3-206ENST00000490969 FOXB2Q5VYV0 432 aa20.5■□□□□ 0.87
SNAPC3-206ENST00000490969 OTOAQ7RTW8 1153 aa20.5■□□□□ 0.87
SNAPC3-206ENST00000490969 MTDHQ86UE4 582 aaKnown RBP20.5■□□□□ 0.87
SNAPC3-206ENST00000490969 SLC47A2Q86VL8 602 aa20.5■□□□□ 0.87
SNAPC3-206ENST00000490969 FAM71AQ8IYT1 594 aa20.5■□□□□ 0.87
SNAPC3-206ENST00000490969 BBOF1Q8ND07 529 aa20.5■□□□□ 0.87
SNAPC3-206ENST00000490969 NRG4Q8WWG1 115 aa20.5■□□□□ 0.87
SNAPC3-206ENST00000490969 SCG3Q8WXD2 468 aaKnown RBP20.5■□□□□ 0.87
SNAPC3-206ENST00000490969 ZBTB39O15060 712 aa20.49■□□□□ 0.87
SNAPC3-206ENST00000490969 CYP26A1O43174 497 aa20.49■□□□□ 0.87
SNAPC3-206ENST00000490969 ATP9AO75110 1047 aa20.49■□□□□ 0.87
SNAPC3-206ENST00000490969 GCLMP48507 274 aa20.49■□□□□ 0.87
SNAPC3-206ENST00000490969 POLE2P56282 527 aa20.49■□□□□ 0.87
SNAPC3-206ENST00000490969 CTC1Q2NKJ3 1217 aa20.49■□□□□ 0.87
SNAPC3-206ENST00000490969 SPDYE2Q495Y8 402 aa20.49■□□□□ 0.87
SNAPC3-206ENST00000490969 ODR4Q5SWX8 454 aa20.49■□□□□ 0.87
SNAPC3-206ENST00000490969 CIAPIN1Q6FI81 312 aa20.49■□□□□ 0.87
SNAPC3-206ENST00000490969 CLNKQ7Z7G1 428 aa20.49■□□□□ 0.87
SNAPC3-206ENST00000490969 TPH2Q8IWU9 490 aa20.49■□□□□ 0.87
SNAPC3-206ENST00000490969 SYCP3Q8IZU3 236 aa20.49■□□□□ 0.87
SNAPC3-206ENST00000490969 C4orf33Q8N1A6 199 aa20.49■□□□□ 0.87
SNAPC3-206ENST00000490969 KCTD17Q8N5Z5 321 aa20.49■□□□□ 0.87
SNAPC3-206ENST00000490969 CYP2W1Q8TAV3 490 aa20.49■□□□□ 0.87
SNAPC3-206ENST00000490969 SLC5A5Q92911 643 aa20.49■□□□□ 0.87
SNAPC3-206ENST00000490969 SMC6Q96SB8 1091 aa20.49■□□□□ 0.87
SNAPC3-206ENST00000490969 HSD17B14Q9BPX1 270 aa20.49■□□□□ 0.87
SNAPC3-206ENST00000490969 GH2P01242 217 aa20.49■□□□□ 0.87
SNAPC3-206ENST00000490969 SREBF1P36956 1147 aa20.49■□□□□ 0.87
SNAPC3-206ENST00000490969 RASA3Q14644 834 aa20.49■□□□□ 0.87
SNAPC3-206ENST00000490969 SLC1A5Q15758 541 aa20.49■□□□□ 0.87
SNAPC3-206ENST00000490969 PKN2Q16513 984 aaKnown RBP20.49■□□□□ 0.87
SNAPC3-206ENST00000490969 ZNF365Q70YC5 407 aa20.49■□□□□ 0.87
SNAPC3-206ENST00000490969 JDP2Q8WYK2 163 aa20.49■□□□□ 0.87
SNAPC3-206ENST00000490969 FGD4Q96M96 766 aa20.49■□□□□ 0.87
SNAPC3-206ENST00000490969 CFAP57Q96MR6 1250 aa20.49■□□□□ 0.87
SNAPC3-206ENST00000490969 RBM15Q96T37 977 aaKnown RBP eCLIP20.49■□□□□ 0.87
SNAPC3-206ENST00000490969 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.49■□□□□ 0.87
SNAPC3-206ENST00000490969 KRT15P19012 456 aa20.48■□□□□ 0.87
SNAPC3-206ENST00000490969 CA4P22748 312 aa20.48■□□□□ 0.87
SNAPC3-206ENST00000490969 CCDC89Q8N998 374 aa20.48■□□□□ 0.87
SNAPC3-206ENST00000490969 NPHS2Q9NP85 383 aa20.48■□□□□ 0.87
SNAPC3-206ENST00000490969 NUMBLQ9Y6R0 609 aa20.48■□□□□ 0.87
SNAPC3-206ENST00000490969 KRT36O76013 467 aa20.48■□□□□ 0.87
SNAPC3-206ENST00000490969 RNF8O76064 485 aa20.48■□□□□ 0.87
SNAPC3-206ENST00000490969 VAMP7P51809 220 aa20.48■□□□□ 0.87
SNAPC3-206ENST00000490969 LAMB3Q13751 1172 aa20.48■□□□□ 0.87
SNAPC3-206ENST00000490969 ZC3H18Q86VM9 953 aaKnown RBP20.48■□□□□ 0.87
SNAPC3-206ENST00000490969 AGBL3Q8NEM8 1001 aa20.48■□□□□ 0.87
SNAPC3-206ENST00000490969 GORASP1Q9BQQ3 440 aa20.48■□□□□ 0.87
SNAPC3-206ENST00000490969 PPP1R12CQ9BZL4 782 aa20.48■□□□□ 0.87
SNAPC3-206ENST00000490969 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.48■□□□□ 0.872e-6■■■■■ 149.1
SNAPC3-206ENST00000490969 POC1B-GALNT4F8VUJ3 575 aa20.47■□□□□ 0.87
SNAPC3-206ENST00000490969 P4HA2O15460 535 aa20.47■□□□□ 0.87
SNAPC3-206ENST00000490969 CCDC22O60826 627 aa20.47■□□□□ 0.87
SNAPC3-206ENST00000490969 SLITRK3O94933 977 aa20.47■□□□□ 0.87
SNAPC3-206ENST00000490969 FGFR1P11362 822 aa20.47■□□□□ 0.87
SNAPC3-206ENST00000490969 ACSBG2Q5FVE4 666 aa20.47■□□□□ 0.87
SNAPC3-206ENST00000490969 TDRPQ86YL5 185 aa20.47■□□□□ 0.87
SNAPC3-206ENST00000490969 DYDC2Q96IM9 177 aa20.47■□□□□ 0.87
SNAPC3-206ENST00000490969 ZBED3Q96IU2 234 aaPredicted RBP20.47■□□□□ 0.87
SNAPC3-206ENST00000490969 CCDC17Q96LX7 622 aa20.47■□□□□ 0.87
SNAPC3-206ENST00000490969 VPS33BQ9H267 617 aa20.47■□□□□ 0.87
SNAPC3-206ENST00000490969 CIITAP33076 1130 aa20.47■□□□□ 0.87
SNAPC3-206ENST00000490969 CACNA2D1P54289 1103 aa20.47■□□□□ 0.87
SNAPC3-206ENST00000490969 CENPCQ03188 943 aa20.47■□□□□ 0.87
SNAPC3-206ENST00000490969 PLEKHG4Q58EX7 1191 aa20.47■□□□□ 0.87
SNAPC3-206ENST00000490969 HHATQ5VTY9 493 aa20.47■□□□□ 0.87
SNAPC3-206ENST00000490969 FYB2Q5VWT5 728 aa20.47■□□□□ 0.87
SNAPC3-206ENST00000490969 LRRC74BQ6ZQY2 392 aa20.47■□□□□ 0.87
SNAPC3-206ENST00000490969 SAMD7Q7Z3H4 446 aa20.47■□□□□ 0.87
SNAPC3-206ENST00000490969 ZCCHC9Q8N567 271 aaKnown RBP20.47■□□□□ 0.87
SNAPC3-206ENST00000490969 DRAXINQ8NBI3 349 aaPredicted RBP20.47■□□□□ 0.87
SNAPC3-206ENST00000490969 ZNF75CPQ92670 426 aaPredicted RBP20.47■□□□□ 0.87
SNAPC3-206ENST00000490969 PCIF1Q9H4Z3 704 aa20.47■□□□□ 0.87
SNAPC3-206ENST00000490969 TUFT1Q9NNX1 390 aa20.47■□□□□ 0.87
SNAPC3-206ENST00000490969 SENP1Q9P0U3 644 aa20.47■□□□□ 0.87
SNAPC3-206ENST00000490969 ANAPC7Q9UJX3 599 aa20.47■□□□□ 0.87
SNAPC3-206ENST00000490969 CAPN9O14815 690 aa20.46■□□□□ 0.87
SNAPC3-206ENST00000490969 MAPK4P31152 587 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms