RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 C10orf71Q711Q0 1435 aa10.76□□□□□ -0.69
BRD9-209ENST00000490814 TMEM150BA6NC51 233 aa10.76□□□□□ -0.69
BRD9-209ENST00000490814 TBX3O15119 743 aa10.76□□□□□ -0.69
BRD9-209ENST00000490814 P4HA2O15460 535 aa10.76□□□□□ -0.69
BRD9-209ENST00000490814 GSTA2P09210 222 aa10.76□□□□□ -0.69
BRD9-209ENST00000490814 ANXA13P27216 316 aa10.76□□□□□ -0.69
BRD9-209ENST00000490814 HOXD12P35452 270 aa10.76□□□□□ -0.69
BRD9-209ENST00000490814 ECE1P42892 770 aa10.76□□□□□ -0.69
BRD9-209ENST00000490814 MXI1P50539 228 aa10.76□□□□□ -0.69
BRD9-209ENST00000490814 PPATQ06203 517 aa10.76□□□□□ -0.69
BRD9-209ENST00000490814 KYNUQ16719 465 aa10.76□□□□□ -0.69
BRD9-209ENST00000490814 MAP1SQ66K74 1059 aaPredicted RBP10.76□□□□□ -0.69
BRD9-209ENST00000490814 MIGA2Q7L4E1 593 aa10.76□□□□□ -0.69
BRD9-209ENST00000490814 SLC47A2Q86VL8 602 aa10.76□□□□□ -0.69
BRD9-209ENST00000490814 ZC3H3Q8IXZ2 948 aaKnown RBP10.76□□□□□ -0.69
BRD9-209ENST00000490814 ABTB1Q969K4 478 aaPredicted RBP10.76□□□□□ -0.69
BRD9-209ENST00000490814 ERP27Q96DN0 273 aa10.76□□□□□ -0.69
BRD9-209ENST00000490814 CLMNQ96JQ2 1002 aa10.76□□□□□ -0.69
BRD9-209ENST00000490814 WDR18Q9BV38 432 aa10.76□□□□□ -0.69
BRD9-209ENST00000490814 ARHGEF3Q9NR81 526 aa10.76□□□□□ -0.69
BRD9-209ENST00000490814 OLFML3Q9NRN5 406 aa10.76□□□□□ -0.69
BRD9-209ENST00000490814 CIDEBQ9UHD4 219 aa10.76□□□□□ -0.69
BRD9-209ENST00000490814 PRR12Q9ULL5 1215 aa10.76□□□□□ -0.69
BRD9-209ENST00000490814 ASTN2O75129 1339 aaPredicted RBP10.76□□□□□ -0.69
BRD9-209ENST00000490814 NAV1Q8NEY1 1877 aa10.76□□□□□ -0.69
BRD9-209ENST00000490814 GTPBP10A4D1E9 387 aaKnown RBP10.76□□□□□ -0.69
BRD9-209ENST00000490814 TRIM43BA6NCK2 446 aa10.76□□□□□ -0.69
BRD9-209ENST00000490814 MIF4GDA9UHW6 222 aaKnown RBP10.76□□□□□ -0.69
BRD9-209ENST00000490814 PODXLO00592 558 aa10.76□□□□□ -0.69
BRD9-209ENST00000490814 NDUFB5O43674 189 aa10.76□□□□□ -0.69
BRD9-209ENST00000490814 POLR2MP0CAP2 368 aa10.76□□□□□ -0.69
BRD9-209ENST00000490814 POTEJP0CG39 1038 aa10.76□□□□□ -0.69
BRD9-209ENST00000490814 ARP10275 920 aa10.76□□□□□ -0.69
BRD9-209ENST00000490814 NOVP48745 357 aa10.76□□□□□ -0.69
BRD9-209ENST00000490814 POU5F1Q01860 360 aaKnown RBP10.76□□□□□ -0.69
BRD9-209ENST00000490814 KRT17Q04695 432 aa10.76□□□□□ -0.69
BRD9-209ENST00000490814 PPP3CAQ08209 521 aa10.76□□□□□ -0.69
BRD9-209ENST00000490814 RASIP1Q5U651 963 aa10.76□□□□□ -0.69
BRD9-209ENST00000490814 DAB2IPQ5VWQ8 1189 aa10.76□□□□□ -0.69
BRD9-209ENST00000490814 PADI6Q6TGC4 694 aa10.76□□□□□ -0.69
BRD9-209ENST00000490814 C1orf186Q6ZWK4 172 aa10.76□□□□□ -0.69
BRD9-209ENST00000490814 GSTA5Q7RTV2 222 aa10.76□□□□□ -0.69
BRD9-209ENST00000490814 LRRC42Q9Y546 428 aa10.76□□□□□ -0.69
BRD9-209ENST00000490814 EIF3FO00303 357 aaPredicted RBP10.75□□□□□ -0.69
BRD9-209ENST00000490814 RGL2O15211 777 aa10.75□□□□□ -0.69
BRD9-209ENST00000490814 SERPINB4P48594 390 aa10.75□□□□□ -0.69
BRD9-209ENST00000490814 SP4Q02446 784 aa10.75□□□□□ -0.69
BRD9-209ENST00000490814 MKRN3Q13064 507 aaKnown RBP10.75□□□□□ -0.69
BRD9-209ENST00000490814 OR52E8Q6IFG1 317 aa10.75□□□□□ -0.69
BRD9-209ENST00000490814 OTOP1Q7RTM1 612 aa10.75□□□□□ -0.69
BRD9-209ENST00000490814 MIER3Q7Z3K6 550 aa10.75□□□□□ -0.69
BRD9-209ENST00000490814 CPXCR1Q8N123 301 aa10.75□□□□□ -0.69
BRD9-209ENST00000490814 ARHGAP18Q8N392 663 aa10.75□□□□□ -0.69
BRD9-209ENST00000490814 CXorf38Q8TB03 319 aa10.75□□□□□ -0.69
BRD9-209ENST00000490814 TXLNGYQ9BZA5 131 aa10.75□□□□□ -0.69
BRD9-209ENST00000490814 LARSQ9P2J5 1176 aaKnown RBP10.75□□□□□ -0.69
BRD9-209ENST00000490814 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.75□□□□□ -0.69
BRD9-209ENST00000490814 DIS3Q9Y2L1 958 aaKnown RBP10.75□□□□□ -0.69
BRD9-209ENST00000490814 ZMYM2Q9UBW7 1377 aa10.75□□□□□ -0.69
BRD9-209ENST00000490814 NCANO14594 1321 aa10.75□□□□□ -0.69
BRD9-209ENST00000490814 SLC16A4O15374 487 aa10.75□□□□□ -0.69
BRD9-209ENST00000490814 COILP38432 576 aaPredicted RBP10.75□□□□□ -0.69
BRD9-209ENST00000490814 TRPC1P48995 793 aa10.75□□□□□ -0.69
BRD9-209ENST00000490814 PLOD1Q02809 727 aaPredicted RBP10.75□□□□□ -0.69
BRD9-209ENST00000490814 SLC44A4Q53GD3 710 aa10.75□□□□□ -0.69
BRD9-209ENST00000490814 TMEM179Q6ZVK1 233 aa10.75□□□□□ -0.69
BRD9-209ENST00000490814 SEC14L1Q92503 715 aa10.75□□□□□ -0.69
BRD9-209ENST00000490814 RUNDC3BQ96NL0 473 aa10.75□□□□□ -0.69
BRD9-209ENST00000490814 CSRNP1Q96S65 589 aa10.75□□□□□ -0.69
BRD9-209ENST00000490814 TXLNGQ9NUQ3 528 aa10.75□□□□□ -0.69
BRD9-209ENST00000490814 GRHL1Q9NZI5 618 aa10.75□□□□□ -0.69
BRD9-209ENST00000490814 WRAP73Q9P2S5 460 aaPredicted RBP10.75□□□□□ -0.69
BRD9-209ENST00000490814 USH1CQ9Y6N9 552 aa10.75□□□□□ -0.69
BRD9-209ENST00000490814 DDX60LQ5H9U9 1706 aaKnown RBP10.75□□□□□ -0.69
BRD9-209ENST00000490814 EIF3DO15371 548 aaKnown RBP eCLIP10.75□□□□□ -0.69
BRD9-209ENST00000490814 PEX3P56589 373 aa10.75□□□□□ -0.69
BRD9-209ENST00000490814 MCL1Q07820 350 aa10.75□□□□□ -0.69
BRD9-209ENST00000490814 BMT2Q1RMZ1 405 aa10.75□□□□□ -0.69
BRD9-209ENST00000490814 FOXB2Q5VYV0 432 aa10.75□□□□□ -0.69
BRD9-209ENST00000490814 C15orf52Q6ZUT6 534 aaKnown RBP10.75□□□□□ -0.69
BRD9-209ENST00000490814 SLC13A5Q86YT5 568 aaPredicted RBP10.75□□□□□ -0.69
BRD9-209ENST00000490814 WDR60Q8WVS4 1066 aa10.75□□□□□ -0.69
BRD9-209ENST00000490814 DHX38Q92620 1227 aaKnown RBP10.75□□□□□ -0.69
BRD9-209ENST00000490814 C9orf72Q96LT7 481 aa10.75□□□□□ -0.69
BRD9-209ENST00000490814 PCDHB18PQ96TA0 734 aa10.75□□□□□ -0.69
BRD9-209ENST00000490814 CDC42EP4Q9H3Q1 356 aaKnown RBP10.75□□□□□ -0.69
BRD9-209ENST00000490814 GPRC5CQ9NQ84 441 aa10.75□□□□□ -0.69
BRD9-209ENST00000490814 TMOD2Q9NZR1 351 aa10.75□□□□□ -0.69
BRD9-209ENST00000490814 NYAP2Q9P242 653 aa10.75□□□□□ -0.69
BRD9-209ENST00000490814 ANAPC7Q9UJX3 599 aa10.75□□□□□ -0.69
BRD9-209ENST00000490814 TMEM247A6NEH6 219 aa10.74□□□□□ -0.69
BRD9-209ENST00000490814 CALB2P22676 271 aa10.74□□□□□ -0.69
BRD9-209ENST00000490814 STAT2P52630 851 aa10.74□□□□□ -0.69
BRD9-209ENST00000490814 GALNTL6Q49A17 601 aa10.74□□□□□ -0.69
BRD9-209ENST00000490814 FAM102BQ5T8I3 360 aa10.74□□□□□ -0.69
BRD9-209ENST00000490814 THOC7Q6I9Y2 204 aaKnown RBP10.74□□□□□ -0.69
BRD9-209ENST00000490814 ZNF554Q86TJ5 538 aa10.74□□□□□ -0.69
BRD9-209ENST00000490814 NOP9Q86U38 636 aaKnown RBP10.74□□□□□ -0.69
BRD9-209ENST00000490814 ZDHHC14Q8IZN3 488 aa10.74□□□□□ -0.69
BRD9-209ENST00000490814 TAB3Q8N5C8 712 aaPredicted RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms