RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 ELF1P32519 619 aa16.97■□□□□ 0.31
COL2A1-207ENST00000490609 NCKAP1LP55160 1127 aa16.97■□□□□ 0.31
COL2A1-207ENST00000490609 TWF1Q12792 350 aa16.97■□□□□ 0.31
COL2A1-207ENST00000490609 GNL2Q13823 731 aaKnown RBP16.97■□□□□ 0.31
COL2A1-207ENST00000490609 ZPBP2Q6X784 338 aa16.97■□□□□ 0.31
COL2A1-207ENST00000490609 TMC8Q8IU68 726 aa16.97■□□□□ 0.31
COL2A1-207ENST00000490609 SHKBP1Q8TBC3 707 aa16.97■□□□□ 0.31
COL2A1-207ENST00000490609 LRRC3BQ96PB8 259 aa16.97■□□□□ 0.31
COL2A1-207ENST00000490609 MKNK1Q9BUB5 465 aa16.97■□□□□ 0.31
COL2A1-207ENST00000490609 TIPINQ9BVW5 301 aa16.97■□□□□ 0.31
COL2A1-207ENST00000490609 TRPV4Q9HBA0 871 aa16.97■□□□□ 0.31
COL2A1-207ENST00000490609 ZNF334Q9HCZ1 680 aaPredicted RBP16.97■□□□□ 0.31
COL2A1-207ENST00000490609 ANKFY1Q9P2R3 1169 aa16.97■□□□□ 0.31
COL2A1-207ENST00000490609 ZNF638Q14966 1978 aaKnown RBP16.97■□□□□ 0.31
COL2A1-207ENST00000490609 CHD8Q9HCK8 2581 aa16.96■□□□□ 0.31
COL2A1-207ENST00000490609 LACTBL1A8MY62 500 aa16.96■□□□□ 0.31
COL2A1-207ENST00000490609 NEFLP07196 543 aa16.96■□□□□ 0.31
COL2A1-207ENST00000490609 PLA2G4BP0C869 781 aa16.96■□□□□ 0.31
COL2A1-207ENST00000490609 MCM4P33991 863 aa16.96■□□□□ 0.31
COL2A1-207ENST00000490609 GAS6Q14393 721 aa16.96■□□□□ 0.31
COL2A1-207ENST00000490609 ERICH6BQ5W0A0 696 aa16.96■□□□□ 0.31
COL2A1-207ENST00000490609 SLC39A4Q6P5W5 647 aa16.96■□□□□ 0.31
COL2A1-207ENST00000490609 ZNF852Q6ZMS4 543 aa16.96■□□□□ 0.31
COL2A1-207ENST00000490609 DNASE1L2Q92874 299 aa16.96■□□□□ 0.31
COL2A1-207ENST00000490609 FIZ1Q96SL8 496 aa16.96■□□□□ 0.31
COL2A1-207ENST00000490609 NELL2Q99435 816 aa16.96■□□□□ 0.31
COL2A1-207ENST00000490609 RAB34Q9BZG1 259 aa16.96■□□□□ 0.31
COL2A1-207ENST00000490609 ZFP14Q9HCL3 533 aa16.96■□□□□ 0.31
COL2A1-207ENST00000490609 TRPV5Q9NQA5 729 aa16.96■□□□□ 0.31
COL2A1-207ENST00000490609 NUB1Q9Y5A7 615 aa16.96■□□□□ 0.31
COL2A1-207ENST00000490609 PCDHGA2Q9Y5H1 932 aa16.96■□□□□ 0.31
COL2A1-207ENST00000490609 ACACBO00763 2458 aa16.96■□□□□ 0.31
COL2A1-207ENST00000490609 SPAG17Q6Q759 2223 aa16.95■□□□□ 0.3
COL2A1-207ENST00000490609 SPTLC1O15269 473 aa16.95■□□□□ 0.3
COL2A1-207ENST00000490609 KINO60870 393 aaKnown RBP16.95■□□□□ 0.3
COL2A1-207ENST00000490609 MAGEA9P43362 315 aa16.95■□□□□ 0.3
COL2A1-207ENST00000490609 TEAD2Q15562 447 aa16.95■□□□□ 0.3
COL2A1-207ENST00000490609 ZRSR1Q15695 479 aaKnown RBP16.95■□□□□ 0.3
COL2A1-207ENST00000490609 ENOX2Q16206 610 aaKnown RBP16.95■□□□□ 0.3
COL2A1-207ENST00000490609 ZNF280DQ6N043 979 aa16.95■□□□□ 0.3
COL2A1-207ENST00000490609 MAMSTRQ6ZN01 415 aa16.95■□□□□ 0.3
COL2A1-207ENST00000490609 PDZD4Q76G19 769 aaPredicted RBP16.95■□□□□ 0.3
COL2A1-207ENST00000490609 TTC9BQ8N6N2 239 aa16.95■□□□□ 0.3
COL2A1-207ENST00000490609 SMARCD2Q92925 531 aa16.95■□□□□ 0.3
COL2A1-207ENST00000490609 TMEM209Q96SK2 561 aa16.95■□□□□ 0.3
COL2A1-207ENST00000490609 TRMT61BQ9BVS5 477 aaKnown RBP16.95■□□□□ 0.3
COL2A1-207ENST00000490609 EPC1Q9H2F5 836 aa16.95■□□□□ 0.3
COL2A1-207ENST00000490609 PLEKHA5Q9HAU0 1116 aa16.95■□□□□ 0.3
COL2A1-207ENST00000490609 BLOC1S4Q9NUP1 217 aa16.95■□□□□ 0.3
COL2A1-207ENST00000490609 ZSCAN32Q9NX65 697 aa16.95■□□□□ 0.3
COL2A1-207ENST00000490609 MAFFQ9ULX9 164 aa16.95■□□□□ 0.3
COL2A1-207ENST00000490609 EML5Q05BV3 1969 aa16.95■□□□□ 0.3
COL2A1-207ENST00000490609 VWA3AA6NCI4 1184 aa16.94■□□□□ 0.3
COL2A1-207ENST00000490609 ZNF197O14709 1029 aa16.94■□□□□ 0.3
COL2A1-207ENST00000490609 CLDN3O15551 220 aa16.94■□□□□ 0.3
COL2A1-207ENST00000490609 CLTAP09496 248 aa16.94■□□□□ 0.3
COL2A1-207ENST00000490609 PSMC3P17980 439 aa16.94■□□□□ 0.3
COL2A1-207ENST00000490609 GDI1P31150 447 aa16.94■□□□□ 0.3
COL2A1-207ENST00000490609 HOXC13P31276 330 aa16.94■□□□□ 0.3
COL2A1-207ENST00000490609 GRIN1Q05586 938 aa16.94■□□□□ 0.3
COL2A1-207ENST00000490609 STXBP5Q5T5C0 1151 aa16.94■□□□□ 0.3
COL2A1-207ENST00000490609 HAUS6Q7Z4H7 955 aa16.94■□□□□ 0.3
COL2A1-207ENST00000490609 GPIHBP1Q8IV16 184 aa16.94■□□□□ 0.3
COL2A1-207ENST00000490609 APPL2Q8NEU8 664 aa16.94■□□□□ 0.3
COL2A1-207ENST00000490609 ZNF512Q96ME7 567 aaPredicted RBP16.94■□□□□ 0.3
COL2A1-207ENST00000490609 CHRDQ9H2X0 955 aa16.94■□□□□ 0.3
COL2A1-207ENST00000490609 NDRG2Q9UN36 371 aaKnown RBP16.94■□□□□ 0.3
COL2A1-207ENST00000490609 YIPF1Q9Y548 306 aa16.94■□□□□ 0.3
COL2A1-207ENST00000490609 CNOT1A5YKK6 2376 aaKnown RBP16.94■□□□□ 0.3
COL2A1-207ENST00000490609 PIGRP01833 764 aa16.93■□□□□ 0.3
COL2A1-207ENST00000490609 CHRNB1P11230 501 aa16.93■□□□□ 0.3
COL2A1-207ENST00000490609 MYL4P12829 197 aa16.93■□□□□ 0.3
COL2A1-207ENST00000490609 CYP3A5P20815 502 aa16.93■□□□□ 0.3
COL2A1-207ENST00000490609 ZNF131P52739 623 aa16.93■□□□□ 0.3
COL2A1-207ENST00000490609 STRN3Q13033 797 aa16.93■□□□□ 0.3
COL2A1-207ENST00000490609 DUSP4Q13115 394 aa16.93■□□□□ 0.3
COL2A1-207ENST00000490609 GPR17Q13304 367 aa16.93■□□□□ 0.3
COL2A1-207ENST00000490609 RILPL1Q5EBL4 403 aa16.93■□□□□ 0.3
COL2A1-207ENST00000490609 CYP4A22Q5TCH4 519 aa16.93■□□□□ 0.3
COL2A1-207ENST00000490609 CENPPQ6IPU0 288 aa16.93■□□□□ 0.3
COL2A1-207ENST00000490609 GAREM2Q75VX8 874 aa16.93■□□□□ 0.3
COL2A1-207ENST00000490609 MFSD6LQ8IWD5 586 aa16.93■□□□□ 0.3
COL2A1-207ENST00000490609 ZSCAN18Q8TBC5 510 aaPredicted RBP16.93■□□□□ 0.3
COL2A1-207ENST00000490609 KIF12Q96FN5 646 aa16.93■□□□□ 0.3
COL2A1-207ENST00000490609 PGLYRP2Q96PD5 576 aa16.93■□□□□ 0.3
COL2A1-207ENST00000490609 REEP2Q9BRK0 252 aa16.93■□□□□ 0.3
COL2A1-207ENST00000490609 BRD9Q9H8M2 597 aa16.93■□□□□ 0.3
COL2A1-207ENST00000490609 PARD6AQ9NPB6 346 aa16.93■□□□□ 0.3
COL2A1-207ENST00000490609 C2orf42Q9NWW7 574 aa16.93■□□□□ 0.3
COL2A1-207ENST00000490609 TBX20Q9UMR3 447 aa16.93■□□□□ 0.3
COL2A1-207ENST00000490609 SLC27A5Q9Y2P5 690 aa16.93■□□□□ 0.3
COL2A1-207ENST00000490609 CACNA1BQ00975 2339 aa16.93■□□□□ 0.3
COL2A1-207ENST00000490609 A0A0B4J269 797 aa16.92■□□□□ 0.3
COL2A1-207ENST00000490609 HEPACAM2A8MVW5 462 aa16.92■□□□□ 0.3
COL2A1-207ENST00000490609 EIF5BO60841 1220 aaKnown RBP16.92■□□□□ 0.3
COL2A1-207ENST00000490609 SOAT2O75908 522 aa16.92■□□□□ 0.3
COL2A1-207ENST00000490609 SMTNP53814 917 aa16.92■□□□□ 0.3
COL2A1-207ENST00000490609 LILRA4P59901 499 aa16.92■□□□□ 0.3
COL2A1-207ENST00000490609 YWHAHQ04917 246 aaPredicted RBP16.92■□□□□ 0.3
COL2A1-207ENST00000490609 PUM1Q14671 1186 aaKnown RBP eCLIP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms