RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 ICE1Q9Y2F5 2266 aa8.09□□□□□ -1.11
COL9A1-209ENST00000489861 FBN2P35556 2912 aa8.08□□□□□ -1.12
COL9A1-209ENST00000489861 TEX51A0A1B0GUA7 166 aa8.08□□□□□ -1.12
COL9A1-209ENST00000489861 FAM149AA5PLN7 773 aa8.08□□□□□ -1.12
COL9A1-209ENST00000489861 ANTXRLA6NF34 631 aa8.08□□□□□ -1.12
COL9A1-209ENST00000489861 SGSM2O43147 1006 aa8.08□□□□□ -1.12
COL9A1-209ENST00000489861 TLX3O43711 291 aaPredicted RBP8.08□□□□□ -1.12
COL9A1-209ENST00000489861 TSPAN1O60635 241 aa8.08□□□□□ -1.12
COL9A1-209ENST00000489861 CBFA2T3O75081 653 aa8.08□□□□□ -1.12
COL9A1-209ENST00000489861 MAFO75444 373 aaPredicted RBP8.08□□□□□ -1.12
COL9A1-209ENST00000489861 U2AF2P26368 475 aaKnown RBP eCLIP8.08□□□□□ -1.12
COL9A1-209ENST00000489861 LIFRP42702 1097 aa8.08□□□□□ -1.12
COL9A1-209ENST00000489861 CSRP3P50461 194 aa8.08□□□□□ -1.12
COL9A1-209ENST00000489861 TUSC3Q13454 348 aa8.08□□□□□ -1.12
COL9A1-209ENST00000489861 PPP1R18Q6NYC8 613 aa8.08□□□□□ -1.12
COL9A1-209ENST00000489861 CD300LGQ6UXG3 332 aa8.08□□□□□ -1.12
COL9A1-209ENST00000489861 GPR155Q7Z3F1 870 aa8.08□□□□□ -1.12
COL9A1-209ENST00000489861 SRGAP1Q7Z6B7 1085 aa8.08□□□□□ -1.12
COL9A1-209ENST00000489861 RASSF3Q86WH2 238 aa8.08□□□□□ -1.12
COL9A1-209ENST00000489861 FMNL3Q8IVF7 1028 aa8.08□□□□□ -1.12
COL9A1-209ENST00000489861 TCEAL8Q8IYN2 117 aa8.08□□□□□ -1.12
COL9A1-209ENST00000489861 ZNF654Q8IZM8 581 aa8.08□□□□□ -1.12
COL9A1-209ENST00000489861 ZNF513Q8N8E2 541 aaPredicted RBP8.08□□□□□ -1.12
COL9A1-209ENST00000489861 SPATA18Q8TC71 538 aa8.08□□□□□ -1.12
COL9A1-209ENST00000489861 CRYGNQ8WXF5 182 aa8.08□□□□□ -1.12
COL9A1-209ENST00000489861 LRRC3Q9BY71 257 aa8.08□□□□□ -1.12
COL9A1-209ENST00000489861 CYP4F11Q9HBI6 524 aa8.08□□□□□ -1.12
COL9A1-209ENST00000489861 HPS4Q9NQG7 708 aa8.08□□□□□ -1.12
COL9A1-209ENST00000489861 DISC1Q9NRI5 854 aa8.08□□□□□ -1.12
COL9A1-209ENST00000489861 DNAAF2Q9NVR5 837 aaKnown RBP8.08□□□□□ -1.12
COL9A1-209ENST00000489861 TOR4AQ9NXH8 423 aa8.08□□□□□ -1.12
COL9A1-209ENST00000489861 SEPT9Q9UHD8 586 aaPredicted RBP8.08□□□□□ -1.12
COL9A1-209ENST00000489861 SLC6A14Q9UN76 642 aa8.08□□□□□ -1.12
COL9A1-209ENST00000489861 PCDHB9Q9Y5E1 797 aa8.08□□□□□ -1.12
COL9A1-209ENST00000489861 COL4A3BPQ9Y5P4 624 aa8.08□□□□□ -1.12
COL9A1-209ENST00000489861 BACE2Q9Y5Z0 518 aa8.08□□□□□ -1.12
COL9A1-209ENST00000489861 SLC12A7Q9Y666 1083 aa8.08□□□□□ -1.12
COL9A1-209ENST00000489861 BOD1L1Q8NFC6 3051 aa8.08□□□□□ -1.12
COL9A1-209ENST00000489861 CENPEQ02224 2701 aa8.07□□□□□ -1.12
COL9A1-209ENST00000489861 CCDC196A0A1B0GTZ2 297 aa8.07□□□□□ -1.12
COL9A1-209ENST00000489861 A0A1W2PRU2 124 aa8.07□□□□□ -1.12
COL9A1-209ENST00000489861 WDR64B1ANS9 1081 aa8.07□□□□□ -1.12
COL9A1-209ENST00000489861 PTGESO14684 152 aa8.07□□□□□ -1.12
COL9A1-209ENST00000489861 SLC28A2O43868 658 aa8.07□□□□□ -1.12
COL9A1-209ENST00000489861 PRAMEF12O95522 483 aa8.07□□□□□ -1.12
COL9A1-209ENST00000489861 FOSP01100 380 aaPredicted RBP8.07□□□□□ -1.12
COL9A1-209ENST00000489861 PRKCBP05771 671 aa8.07□□□□□ -1.12
COL9A1-209ENST00000489861 SERPINF2P08697 491 aa8.07□□□□□ -1.12
COL9A1-209ENST00000489861 SRGAP2CP0DJJ0 459 aa8.07□□□□□ -1.12
COL9A1-209ENST00000489861 KRT10P13645 584 aa8.07□□□□□ -1.12
COL9A1-209ENST00000489861 GSPT1P15170 499 aaKnown RBP8.07□□□□□ -1.12
COL9A1-209ENST00000489861 ATF2P15336 505 aa8.07□□□□□ -1.12
COL9A1-209ENST00000489861 TKTP29401 623 aaKnown RBP8.07□□□□□ -1.12
COL9A1-209ENST00000489861 ELF1P32519 619 aa8.07□□□□□ -1.12
COL9A1-209ENST00000489861 GALK1P51570 392 aa8.07□□□□□ -1.12
COL9A1-209ENST00000489861 GFPT1Q06210 699 aaPredicted RBP8.07□□□□□ -1.12
COL9A1-209ENST00000489861 ELAVL2Q12926 359 aaKnown RBP8.07□□□□□ -1.12
COL9A1-209ENST00000489861 KRT32Q14532 448 aa8.07□□□□□ -1.12
COL9A1-209ENST00000489861 NAB2Q15742 525 aa8.07□□□□□ -1.12
COL9A1-209ENST00000489861 ANO7Q6IWH7 933 aa8.07□□□□□ -1.12
COL9A1-209ENST00000489861 SLC8B1Q6J4K2 584 aa8.07□□□□□ -1.12
COL9A1-209ENST00000489861 LPCAT2Q7L5N7 544 aa8.07□□□□□ -1.12
COL9A1-209ENST00000489861 HAUS6Q7Z4H7 955 aa8.07□□□□□ -1.12
COL9A1-209ENST00000489861 HEATR3Q7Z4Q2 680 aa8.07□□□□□ -1.12
COL9A1-209ENST00000489861 GLRX5Q86SX6 157 aa8.07□□□□□ -1.12
COL9A1-209ENST00000489861 CDR2LQ86X02 465 aaPredicted RBP8.07□□□□□ -1.12
COL9A1-209ENST00000489861 NAXDQ8IW45 347 aa8.07□□□□□ -1.12
COL9A1-209ENST00000489861 MDGA1Q8NFP4 955 aa8.07□□□□□ -1.12
COL9A1-209ENST00000489861 TSTD1Q8NFU3 115 aa8.07□□□□□ -1.12
COL9A1-209ENST00000489861 OLIG1Q8TAK6 271 aa8.07□□□□□ -1.12
COL9A1-209ENST00000489861 CCDC12Q8WUD4 166 aaPredicted RBP8.07□□□□□ -1.12
COL9A1-209ENST00000489861 GPR88Q9GZN0 384 aa8.07□□□□□ -1.12
COL9A1-209ENST00000489861 CSRNP2Q9H175 543 aa8.07□□□□□ -1.12
COL9A1-209ENST00000489861 RIC8AQ9NPQ8 531 aa8.07□□□□□ -1.12
COL9A1-209ENST00000489861 ASAH2Q9NR71 780 aa8.07□□□□□ -1.12
COL9A1-209ENST00000489861 KIAA1522Q9P206 1035 aaPredicted RBP8.07□□□□□ -1.12
COL9A1-209ENST00000489861 SRPK3Q9UPE1 567 aa8.07□□□□□ -1.12
COL9A1-209ENST00000489861 RBM8AQ9Y5S9 174 aaKnown RBP8.07□□□□□ -1.12
COL9A1-209ENST00000489861 STK24Q9Y6E0 443 aa8.07□□□□□ -1.12
COL9A1-209ENST00000489861 MYOFQ9NZM1 2061 aa8.06□□□□□ -1.12
COL9A1-209ENST00000489861 I3L4J1 428 aa8.06□□□□□ -1.12
COL9A1-209ENST00000489861 ERVH48-1M5A8F1 160 aa8.06□□□□□ -1.12
COL9A1-209ENST00000489861 ARHGAP33O14559 1287 aa8.06□□□□□ -1.12
COL9A1-209ENST00000489861 ADAMTS3O15072 1205 aa8.06□□□□□ -1.12
COL9A1-209ENST00000489861 PRC1O43663 620 aa8.06□□□□□ -1.12
COL9A1-209ENST00000489861 DKK1O94907 266 aa8.06□□□□□ -1.12
COL9A1-209ENST00000489861 CYP3A4P08684 503 aa8.06□□□□□ -1.12
COL9A1-209ENST00000489861 HMGB1P09429 215 aaKnown RBP8.06□□□□□ -1.12
COL9A1-209ENST00000489861 ATXN1LP0C7T5 689 aaKnown RBP8.06□□□□□ -1.12
COL9A1-209ENST00000489861 HNRNPLP14866 589 aaKnown RBP eCLIP8.06□□□□□ -1.12
COL9A1-209ENST00000489861 P2RY2P41231 377 aa8.06□□□□□ -1.12
COL9A1-209ENST00000489861 CLK2P49760 499 aaKnown RBP8.06□□□□□ -1.12
COL9A1-209ENST00000489861 RCAN1P53805 252 aa8.06□□□□□ -1.12
COL9A1-209ENST00000489861 ARPP19P56211 112 aa8.06□□□□□ -1.12
COL9A1-209ENST00000489861 LAMTOR4Q0VGL1 99 aa8.06□□□□□ -1.12
COL9A1-209ENST00000489861 TWF1Q12792 350 aa8.06□□□□□ -1.12
COL9A1-209ENST00000489861 AP3B2Q13367 1082 aa8.06□□□□□ -1.12
COL9A1-209ENST00000489861 LY6DQ14210 128 aa8.06□□□□□ -1.12
COL9A1-209ENST00000489861 NBR1Q14596 966 aa8.06□□□□□ -1.12
COL9A1-209ENST00000489861 DUOXA1Q1HG43 343 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms