RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 THOC5Q13769 683 aaKnown RBP5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 LPIN1Q14693 890 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 NDUFA5Q16718 116 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 CTC1Q2NKJ3 1217 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 ZNF568Q3ZCX4 644 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 FAM83BQ5T0W9 1011 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 C6orf163Q5TEZ5 329 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 CENPPQ6IPU0 288 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 AAGABQ6PD74 315 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 DHRS4L2Q6PKH6 230 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 NET1Q7Z628 596 aaPredicted RBP5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 CLNKQ7Z7G1 428 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 RASSF3Q86WH2 238 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 PDSS2Q86YH6 399 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 JAMLQ86YT9 394 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 LRRC49Q8IUZ0 686 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 ERI1Q8IV48 349 aaKnown RBP5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 CEP70Q8NHQ1 597 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 C10orf82Q8WW14 230 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 ART4Q93070 314 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 EFHD2Q96C19 240 aaPredicted RBP5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 HSPBAP1Q96EW2 488 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 PTCD3Q96EY7 689 aaKnown RBP5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 TRIM11Q96F44 468 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 CRAMP1Q96RY5 1269 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 CCT7Q99832 543 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 SH3GL1Q99961 368 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 HGH1Q9BTY7 390 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 PHF20Q9BVI0 1012 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 EBF3Q9H4W6 596 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 MAGEF1Q9HAY2 307 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 TCP11L1Q9NUJ3 509 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 KBTBD4Q9NVX7 518 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 NDE1Q9NXR1 346 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 QPCTLQ9NXS2 382 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 GRHL1Q9NZI5 618 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 KLK14Q9P0G3 267 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 ARMCX3Q9UH62 379 aaPredicted RBP5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 LGALS13Q9UHV8 139 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 ASAP1Q9ULH1 1129 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 CARD8Q9Y2G2 431 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 FRMD4BQ9Y2L6 1034 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 TDRKHQ9Y2W6 561 aaKnown RBP5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 GIT1Q9Y2X7 761 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 NUMBLQ9Y6R0 609 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 DIP2AQ14689 1571 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 KAT6BQ8WYB5 2073 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 AKAP12Q02952 1782 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 MON2Q7Z3U7 1717 aa5.04□□□□□ -1.6
SNRNP40-206ENST00000489853 SOBPA7XYQ1 873 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 B4E1Z4 1266 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 LILRA1O75019 489 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 FKBP6O75344 327 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 TPPPO94811 219 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 OXSR1O95747 527 aaPredicted RBP5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 TTLL1O95922 423 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 CLPTM1O96005 669 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 GH1P01241 217 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 FGGP02679 453 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 TFAP2AP05549 437 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 CYP2C9P11712 490 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 COL6A2P12110 1019 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 KCNA6P17658 529 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 MUTP22033 750 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 DNAJA1P31689 397 aaKnown RBP5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 PGM1P36871 562 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 PPARGP37231 505 aaPredicted RBP5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 GRM5P41594 1212 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 PTGIRP43119 386 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 TIMM10P62072 90 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 KLHL30Q0D2K2 578 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 CDC16Q13042 620 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 TRIM32Q13049 653 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 MAPK7Q13164 816 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 PDK3Q15120 406 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 ALX1Q15699 326 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 IL17AQ16552 155 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 KYNUQ16719 465 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 TRMT5Q32P41 509 aaKnown RBP5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 MEX3CQ5U5Q3 659 aaKnown RBP5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 FOXR2Q6PJQ5 311 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 OTUD6AQ7L8S5 288 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 NLRP9Q7RTR0 991 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 PTF1AQ7RTS3 328 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 MTDHQ86UE4 582 aaKnown RBP5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 NT5DC3Q86UY8 548 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 LRRC6Q86X45 466 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 PALB2Q86YC2 1186 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 SCYL3Q8IZE3 742 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 FANCBQ8NB91 859 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 ZFP28Q8NHY6 868 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 UHMK1Q8TAS1 419 aaKnown RBP5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 GIPC3Q8TF64 312 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 C7orf43Q8WVR3 580 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 TNFRSF25Q93038 417 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 RNF34Q969K3 372 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 BIRC8Q96P09 236 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 BTBD9Q96Q07 612 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 MYL10Q9BUA6 226 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms