RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	PIR	O00625	290 aa		11.99	□□□□□ -0.49
GGA1-222	ENST00000489772	TGFB1I1	O43294	461 aa		11.99	□□□□□ -0.49
GGA1-222	ENST00000489772	ZMYND10	O75800	440 aa		11.99	□□□□□ -0.49
GGA1-222	ENST00000489772	C8A	P07357	584 aa		11.99	□□□□□ -0.49
GGA1-222	ENST00000489772	SP100	P23497	879 aa	Predicted RBP	11.99	□□□□□ -0.49
GGA1-222	ENST00000489772	AARS	P49588	968 aa	Known RBP eCLIP	11.99	□□□□□ -0.49	9e-7	■■■■■ 61.1
GGA1-222	ENST00000489772	YWHAH	Q04917	246 aa	Predicted RBP	11.99	□□□□□ -0.49
GGA1-222	ENST00000489772	STK4	Q13043	487 aa		11.99	□□□□□ -0.49
GGA1-222	ENST00000489772	MRPL58	Q14197	206 aa	Known RBP	11.99	□□□□□ -0.49
GGA1-222	ENST00000489772	SURF1	Q15526	300 aa		11.99	□□□□□ -0.49
GGA1-222	ENST00000489772	CTXN3	Q4LDR2	81 aa		11.99	□□□□□ -0.49
GGA1-222	ENST00000489772	PPM1L	Q5SGD2	360 aa		11.99	□□□□□ -0.49
GGA1-222	ENST00000489772	ZNF280D	Q6N043	979 aa		11.99	□□□□□ -0.49
GGA1-222	ENST00000489772	RSPO2	Q6UXX9	243 aa	Predicted RBP	11.99	□□□□□ -0.49
GGA1-222	ENST00000489772	CCDC149	Q6ZUS6	474 aa		11.99	□□□□□ -0.49
GGA1-222	ENST00000489772	RTL10	Q7L3V2	364 aa		11.99	□□□□□ -0.49
GGA1-222	ENST00000489772	RNF135	Q8IUD6	432 aa		11.99	□□□□□ -0.49
GGA1-222	ENST00000489772	EFCAB13	Q8IY85	973 aa		11.99	□□□□□ -0.49
GGA1-222	ENST00000489772	ZSWIM2	Q8NEG5	633 aa		11.99	□□□□□ -0.49
GGA1-222	ENST00000489772	SMG7	Q92540	1137 aa	Known RBP	11.99	□□□□□ -0.49
GGA1-222	ENST00000489772	C1QTNF1	Q9BXJ1	281 aa		11.99	□□□□□ -0.49
GGA1-222	ENST00000489772	OXCT2	Q9BYC2	517 aa	Predicted RBP	11.99	□□□□□ -0.49
GGA1-222	ENST00000489772	PRKD2	Q9BZL6	878 aa		11.99	□□□□□ -0.49
GGA1-222	ENST00000489772	FBXL5	Q9UKA1	691 aa		11.99	□□□□□ -0.49
GGA1-222	ENST00000489772	UST	Q9Y2C2	406 aa		11.99	□□□□□ -0.49
GGA1-222	ENST00000489772	PPEF2	O14830	753 aa		11.98	□□□□□ -0.49
GGA1-222	ENST00000489772	DCX	O43602	365 aa		11.98	□□□□□ -0.49
GGA1-222	ENST00000489772	TBC1D4	O60343	1298 aa		11.98	□□□□□ -0.49
GGA1-222	ENST00000489772	OAZ2	O95190	189 aa		11.98	□□□□□ -0.49
GGA1-222	ENST00000489772	KIF20A	O95235	890 aa		11.98	□□□□□ -0.49
GGA1-222	ENST00000489772	PAPLN	O95428	1278 aa		11.98	□□□□□ -0.49
GGA1-222	ENST00000489772	HNRNPA1	P09651	372 aa	Known RBP eCLIP	11.98	□□□□□ -0.49
GGA1-222	ENST00000489772	ODC1	P11926	461 aa		11.98	□□□□□ -0.49
GGA1-222	ENST00000489772	TYMP	P19971	482 aa		11.98	□□□□□ -0.49
GGA1-222	ENST00000489772	HOXA9	P31269	272 aa		11.98	□□□□□ -0.49
GGA1-222	ENST00000489772	ELF1	P32519	619 aa		11.98	□□□□□ -0.49
GGA1-222	ENST00000489772	ANP32A	P39687	249 aa	Known RBP	11.98	□□□□□ -0.49
GGA1-222	ENST00000489772	TAF6	P49848	677 aa		11.98	□□□□□ -0.49
GGA1-222	ENST00000489772	ARPP19	P56211	112 aa		11.98	□□□□□ -0.49
GGA1-222	ENST00000489772	ROR1	Q01973	937 aa		11.98	□□□□□ -0.49
GGA1-222	ENST00000489772	UVSSA	Q2YD98	709 aa		11.98	□□□□□ -0.49
GGA1-222	ENST00000489772	OTOP3	Q7RTS5	596 aa		11.98	□□□□□ -0.49
GGA1-222	ENST00000489772	CBWD2	Q8IUF1	395 aa		11.98	□□□□□ -0.49
GGA1-222	ENST00000489772	TDRD5	Q8NAT2	981 aa	Known RBP	11.98	□□□□□ -0.49
GGA1-222	ENST00000489772	XXYLT1	Q8NBI6	393 aa		11.98	□□□□□ -0.49
GGA1-222	ENST00000489772	ZNF461	Q8TAF7	563 aa		11.98	□□□□□ -0.49
GGA1-222	ENST00000489772	SLC7A14	Q8TBB6	771 aa		11.98	□□□□□ -0.49
GGA1-222	ENST00000489772	KHSRP	Q92945	711 aa	Known RBP eCLIP	11.98	□□□□□ -0.49
GGA1-222	ENST00000489772	SENP8	Q96LD8	212 aa		11.98	□□□□□ -0.49
GGA1-222	ENST00000489772	EPHX3	Q9H6B9	360 aa		11.98	□□□□□ -0.49
GGA1-222	ENST00000489772	PDE11A	Q9HCR9	933 aa		11.98	□□□□□ -0.49
GGA1-222	ENST00000489772	R3HCC1	Q9Y3T6	440 aa	Known RBP	11.98	□□□□□ -0.49
GGA1-222	ENST00000489772	TIMM13	Q9Y5L4	95 aa	Predicted RBP	11.98	□□□□□ -0.49
GGA1-222	ENST00000489772	CLIC2	O15247	247 aa		11.97	□□□□□ -0.49
GGA1-222	ENST00000489772	SPTLC1	O15269	473 aa		11.97	□□□□□ -0.49
GGA1-222	ENST00000489772	XYLB	O75191	536 aa		11.97	□□□□□ -0.49
GGA1-222	ENST00000489772	ABLIM3	O94929	683 aa		11.97	□□□□□ -0.49
GGA1-222	ENST00000489772	TMEM191B	P0C7N4	346 aa		11.97	□□□□□ -0.49
GGA1-222	ENST00000489772	PNPLA4	P41247	253 aa		11.97	□□□□□ -0.49
GGA1-222	ENST00000489772	CYP2J2	P51589	502 aa		11.97	□□□□□ -0.49
GGA1-222	ENST00000489772	WNT7B	P56706	349 aa		11.97	□□□□□ -0.49
GGA1-222	ENST00000489772	DPYD	Q12882	1025 aa		11.97	□□□□□ -0.49
GGA1-222	ENST00000489772	SNRNP35	Q16560	246 aa	Known RBP	11.97	□□□□□ -0.49
GGA1-222	ENST00000489772	SV2C	Q496J9	727 aa		11.97	□□□□□ -0.49
GGA1-222	ENST00000489772	TPGS2	Q68CL5	300 aa		11.97	□□□□□ -0.49
GGA1-222	ENST00000489772	OVOS1	Q6IE37	1185 aa		11.97	□□□□□ -0.49
GGA1-222	ENST00000489772	C12orf56	Q8IXR9	622 aa		11.97	□□□□□ -0.49
GGA1-222	ENST00000489772	FMR1NB	Q8N0W7	255 aa	Predicted RBP	11.97	□□□□□ -0.49
GGA1-222	ENST00000489772	PLCD3	Q8N3E9	789 aa		11.97	□□□□□ -0.49
GGA1-222	ENST00000489772	CSGALNACT2	Q8N6G5	542 aa		11.97	□□□□□ -0.49
GGA1-222	ENST00000489772	RDH13	Q8NBN7	331 aa		11.97	□□□□□ -0.49
GGA1-222	ENST00000489772	KIAA0895	Q8NCT3	520 aa		11.97	□□□□□ -0.49
GGA1-222	ENST00000489772	FEZF2	Q8TBJ5	459 aa		11.97	□□□□□ -0.49
GGA1-222	ENST00000489772	ZNF707	Q96C28	371 aa	Predicted RBP	11.97	□□□□□ -0.49
GGA1-222	ENST00000489772	ACSF2	Q96CM8	615 aa	Predicted RBP	11.97	□□□□□ -0.49
GGA1-222	ENST00000489772	ZNF560	Q96MR9	790 aa		11.97	□□□□□ -0.49
GGA1-222	ENST00000489772	WDR6	Q9NNW5	1121 aa	Known RBP	11.97	□□□□□ -0.49
GGA1-222	ENST00000489772	MUTYH	Q9UIF7	546 aa		11.97	□□□□□ -0.49
GGA1-222	ENST00000489772	ITGA11	Q9UKX5	1188 aa		11.97	□□□□□ -0.49
GGA1-222	ENST00000489772	DSE	Q9UL01	958 aa		11.97	□□□□□ -0.49
GGA1-222	ENST00000489772	MAFF	Q9ULX9	164 aa		11.97	□□□□□ -0.49
GGA1-222	ENST00000489772	WDR27	A2RRH5	827 aa		11.96	□□□□□ -0.49
GGA1-222	ENST00000489772	OR6C75	A6NL08	312 aa		11.96	□□□□□ -0.49
GGA1-222	ENST00000489772	KPNA7	A9QM74	516 aa		11.96	□□□□□ -0.49
GGA1-222	ENST00000489772	C2CD4D	B7Z1M9	353 aa		11.96	□□□□□ -0.49
GGA1-222	ENST00000489772	CYB561D2	O14569	222 aa		11.96	□□□□□ -0.49
GGA1-222	ENST00000489772	PRRG1	O14668	218 aa		11.96	□□□□□ -0.49
GGA1-222	ENST00000489772	EXOC3	O60645	756 aa		11.96	□□□□□ -0.49
GGA1-222	ENST00000489772	PRPF40A	O75400	957 aa	Known RBP	11.96	□□□□□ -0.49
GGA1-222	ENST00000489772	RHOBTB3	O94955	611 aa		11.96	□□□□□ -0.49
GGA1-222	ENST00000489772	TNNC2	P02585	160 aa		11.96	□□□□□ -0.49
GGA1-222	ENST00000489772	ITGB3	P05106	788 aa		11.96	□□□□□ -0.49
GGA1-222	ENST00000489772	KRT19	P08727	400 aa		11.96	□□□□□ -0.49
GGA1-222	ENST00000489772	CPB1	P15086	417 aa		11.96	□□□□□ -0.49
GGA1-222	ENST00000489772	ATF2	P15336	505 aa		11.96	□□□□□ -0.49
GGA1-222	ENST00000489772	POLR2B	P30876	1174 aa	Known RBP	11.96	□□□□□ -0.49
GGA1-222	ENST00000489772	RBP5	P82980	135 aa		11.96	□□□□□ -0.49
GGA1-222	ENST00000489772	FAM160A1	Q05DH4	1040 aa		11.96	□□□□□ -0.49
GGA1-222	ENST00000489772	DUOXA2	Q1HG44	320 aa		11.96	□□□□□ -0.49
GGA1-222	ENST00000489772	METTL23	Q86XA0	190 aa		11.96	□□□□□ -0.49

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