RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 ACSF2Q96CM8 615 aaPredicted RBP11.45□□□□□ -0.58
SCAMP4-208ENST00000489554 HVCN1Q96D96 273 aa11.45□□□□□ -0.58
SCAMP4-208ENST00000489554 DHTKD1Q96HY7 919 aaPredicted RBP11.45□□□□□ -0.58
SCAMP4-208ENST00000489554 TSPAN18Q96SJ8 248 aa11.45□□□□□ -0.58
SCAMP4-208ENST00000489554 CLSTN3Q9BQT9 956 aa11.45□□□□□ -0.58
SCAMP4-208ENST00000489554 HAPLN2Q9GZV7 340 aa11.45□□□□□ -0.58
SCAMP4-208ENST00000489554 RBSNQ9H1K0 784 aa11.45□□□□□ -0.58
SCAMP4-208ENST00000489554 RWDD2AQ9UIY3 292 aa11.45□□□□□ -0.58
SCAMP4-208ENST00000489554 ARIH1Q9Y4X5 557 aaPredicted RBP11.45□□□□□ -0.58
SCAMP4-208ENST00000489554 A0A0B4J269 797 aa11.44□□□□□ -0.58
SCAMP4-208ENST00000489554 TTC26A0AVF1 554 aa11.44□□□□□ -0.58
SCAMP4-208ENST00000489554 ANKRD63C9JTQ0 380 aa11.44□□□□□ -0.58
SCAMP4-208ENST00000489554 SYN3O14994 580 aa11.44□□□□□ -0.58
SCAMP4-208ENST00000489554 OGTO15294 1046 aa11.44□□□□□ -0.58
SCAMP4-208ENST00000489554 MEFVO15553 781 aaPredicted RBP11.44□□□□□ -0.58
SCAMP4-208ENST00000489554 XPOTO43592 962 aaKnown RBP11.44□□□□□ -0.58
SCAMP4-208ENST00000489554 ZMYND10O75800 440 aa11.44□□□□□ -0.58
SCAMP4-208ENST00000489554 SPATA31D3P0C874 917 aa11.44□□□□□ -0.58
SCAMP4-208ENST00000489554 CXCL8P10145 99 aa11.44□□□□□ -0.58
SCAMP4-208ENST00000489554 ZNF165P49910 485 aa11.44□□□□□ -0.58
SCAMP4-208ENST00000489554 STX17P56962 302 aa11.44□□□□□ -0.58
SCAMP4-208ENST00000489554 PPP2R3AQ06190 1150 aa11.44□□□□□ -0.58
SCAMP4-208ENST00000489554 SIGLEC14Q08ET2 396 aa11.44□□□□□ -0.58
SCAMP4-208ENST00000489554 PAK1Q13153 545 aa11.44□□□□□ -0.58
SCAMP4-208ENST00000489554 RAB33AQ14088 237 aa11.44□□□□□ -0.58
SCAMP4-208ENST00000489554 KNOP1Q1ED39 458 aaKnown RBP11.44□□□□□ -0.58
SCAMP4-208ENST00000489554 SEZ6Q53EL9 994 aa11.44□□□□□ -0.58
SCAMP4-208ENST00000489554 LIN9Q5TKA1 542 aa11.44□□□□□ -0.58
SCAMP4-208ENST00000489554 ANKRD40Q6AI12 368 aa11.44□□□□□ -0.58
SCAMP4-208ENST00000489554 SLFN12LQ6IEE8 588 aa11.44□□□□□ -0.58
SCAMP4-208ENST00000489554 KLHL10Q6JEL2 608 aa11.44□□□□□ -0.58
SCAMP4-208ENST00000489554 CD300LGQ6UXG3 332 aa11.44□□□□□ -0.58
SCAMP4-208ENST00000489554 TRIM67Q6ZTA4 783 aa11.44□□□□□ -0.58
SCAMP4-208ENST00000489554 SPATA31D4Q6ZUB0 917 aa11.44□□□□□ -0.58
SCAMP4-208ENST00000489554 C3orf58Q8NDZ4 430 aa11.44□□□□□ -0.58
SCAMP4-208ENST00000489554 FAM200AQ8TCP9 573 aa11.44□□□□□ -0.58
SCAMP4-208ENST00000489554 SMG7Q92540 1137 aaKnown RBP11.44□□□□□ -0.58
SCAMP4-208ENST00000489554 RPF1Q9H9Y2 349 aaKnown RBP11.44□□□□□ -0.58
SCAMP4-208ENST00000489554 PIDD1Q9HB75 910 aa11.44□□□□□ -0.58
SCAMP4-208ENST00000489554 WDR6Q9NNW5 1121 aaKnown RBP11.44□□□□□ -0.58
SCAMP4-208ENST00000489554 MTRRQ9UBK8 725 aa11.44□□□□□ -0.58
SCAMP4-208ENST00000489554 FBXW11Q9UKB1 542 aa11.44□□□□□ -0.58
SCAMP4-208ENST00000489554 SORCS3Q9UPU3 1222 aa11.44□□□□□ -0.58
SCAMP4-208ENST00000489554 TRAF3IP3Q9Y228 551 aa11.44□□□□□ -0.58
SCAMP4-208ENST00000489554 NUB1Q9Y5A7 615 aa11.44□□□□□ -0.58
SCAMP4-208ENST00000489554 PCDHB13Q9Y5F0 798 aa11.44□□□□□ -0.58
SCAMP4-208ENST00000489554 BACE2Q9Y5Z0 518 aa11.44□□□□□ -0.58
SCAMP4-208ENST00000489554 CLUHO75153 1309 aa11.43□□□□□ -0.58
SCAMP4-208ENST00000489554 TMEM221A6NGB7 291 aa11.43□□□□□ -0.58
SCAMP4-208ENST00000489554 M0R296 226 aa11.43□□□□□ -0.58
SCAMP4-208ENST00000489554 PDXKO00764 312 aa11.43□□□□□ -0.58
SCAMP4-208ENST00000489554 PSMA7O14818 248 aa11.43□□□□□ -0.58
SCAMP4-208ENST00000489554 IKBKBO14920 756 aa11.43□□□□□ -0.58
SCAMP4-208ENST00000489554 FAM189A1O60320 539 aa11.43□□□□□ -0.58
SCAMP4-208ENST00000489554 RFPL2O75678 378 aa11.43□□□□□ -0.58
SCAMP4-208ENST00000489554 ADRB2P07550 413 aa11.43□□□□□ -0.58
SCAMP4-208ENST00000489554 HNRNPA1P09651 372 aaKnown RBP eCLIP11.43□□□□□ -0.58
SCAMP4-208ENST00000489554 CYP3A5P20815 502 aa11.43□□□□□ -0.58
SCAMP4-208ENST00000489554 TKTP29401 623 aaKnown RBP11.43□□□□□ -0.58
SCAMP4-208ENST00000489554 ADSSP30520 456 aa11.43□□□□□ -0.58
SCAMP4-208ENST00000489554 HOXA9P31269 272 aa11.43□□□□□ -0.58
SCAMP4-208ENST00000489554 PPP1R2P41236 205 aa11.43□□□□□ -0.58
SCAMP4-208ENST00000489554 BRCC3P46736 316 aa11.43□□□□□ -0.58
SCAMP4-208ENST00000489554 CCDC173Q0VFZ6 552 aa11.43□□□□□ -0.58
SCAMP4-208ENST00000489554 MTMR3Q13615 1198 aa11.43□□□□□ -0.58
SCAMP4-208ENST00000489554 NFIL3Q16649 462 aa11.43□□□□□ -0.58
SCAMP4-208ENST00000489554 RTL10Q7L3V2 364 aa11.43□□□□□ -0.58
SCAMP4-208ENST00000489554 BMP8AQ7Z5Y6 402 aa11.43□□□□□ -0.58
SCAMP4-208ENST00000489554 LUZP1Q86V48 1076 aa11.43□□□□□ -0.58
SCAMP4-208ENST00000489554 IRF2BP1Q8IU81 584 aa11.43□□□□□ -0.58
SCAMP4-208ENST00000489554 CD302Q8IX05 232 aa11.43□□□□□ -0.58
SCAMP4-208ENST00000489554 UBALD2Q8IYN6 164 aa11.43□□□□□ -0.58
SCAMP4-208ENST00000489554 AOPEPQ8N6M6 819 aa11.43□□□□□ -0.58
SCAMP4-208ENST00000489554 ZSWIM2Q8NEG5 633 aa11.43□□□□□ -0.58
SCAMP4-208ENST00000489554 ENOX1Q8TC92 643 aaKnown RBP11.43□□□□□ -0.58
SCAMP4-208ENST00000489554 TMEM174Q8WUU8 243 aa11.43□□□□□ -0.58
SCAMP4-208ENST00000489554 C18orf25Q96B23 403 aaPredicted RBP11.43□□□□□ -0.58
SCAMP4-208ENST00000489554 ZNF707Q96C28 371 aaPredicted RBP11.43□□□□□ -0.58
SCAMP4-208ENST00000489554 KIF12Q96FN5 646 aa11.43□□□□□ -0.58
SCAMP4-208ENST00000489554 MFSD14AQ96MC6 490 aa11.43□□□□□ -0.58
SCAMP4-208ENST00000489554 ACCSQ96QU6 501 aa11.43□□□□□ -0.58
SCAMP4-208ENST00000489554 MSTO1Q9BUK6 570 aa11.43□□□□□ -0.58
SCAMP4-208ENST00000489554 PRKD2Q9BZL6 878 aa11.43□□□□□ -0.58
SCAMP4-208ENST00000489554 AGPAT3Q9NRZ7 376 aa11.43□□□□□ -0.58
SCAMP4-208ENST00000489554 DMAC2Q9NW81 257 aa11.43□□□□□ -0.58
SCAMP4-208ENST00000489554 DACH1Q9UI36 760 aa11.43□□□□□ -0.58
SCAMP4-208ENST00000489554 UBQLN1Q9UMX0 589 aaKnown RBP11.43□□□□□ -0.58
SCAMP4-208ENST00000489554 EXOC7Q9UPT5 735 aa11.43□□□□□ -0.58
SCAMP4-208ENST00000489554 STYXL1Q9Y6J8 313 aa11.43□□□□□ -0.58
SCAMP4-208ENST00000489554 C5orf42Q9H799 3197 aa11.42□□□□□ -0.58
SCAMP4-208ENST00000489554 H7C4K7 107 aa11.42□□□□□ -0.58
SCAMP4-208ENST00000489554 I3L4J1 428 aa11.42□□□□□ -0.58
SCAMP4-208ENST00000489554 POU2F2P09086 479 aa11.42□□□□□ -0.58
SCAMP4-208ENST00000489554 ZNF18P17022 549 aa11.42□□□□□ -0.58
SCAMP4-208ENST00000489554 IGFBP6P24592 240 aaPredicted RBP11.42□□□□□ -0.58
SCAMP4-208ENST00000489554 LRPAP1P30533 357 aa11.42□□□□□ -0.58
SCAMP4-208ENST00000489554 OR1D2P34982 312 aa11.42□□□□□ -0.58
SCAMP4-208ENST00000489554 TNFSF9P41273 254 aa11.42□□□□□ -0.58
SCAMP4-208ENST00000489554 POU5F1Q01860 360 aaKnown RBP11.42□□□□□ -0.58
SCAMP4-208ENST00000489554 LRRC63Q05C16 580 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms