RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 FBXO16Q8IX29 292 aaPredicted RBP6.82□□□□□ -1.32
SF3A3-208ENST00000489537 LINC00528Q8N1L1 170 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 MMGT1Q8N4V1 131 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 RNF149Q8NC42 400 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 SLC30A5Q8TAD4 765 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 ASAP3Q8TDY4 903 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 MAIP1Q8WWC4 291 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 BSNDQ8WZ55 320 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 FGD4Q96M96 766 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 RPS6KC1Q96S38 1066 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 APBA2Q99767 749 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 ACO2Q99798 780 aaKnown RBP6.82□□□□□ -1.32
SF3A3-208ENST00000489537 ARHGAP9Q9BRR9 750 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 GCOM2Q9BZD3 368 aaPredicted RBP6.82□□□□□ -1.32
SF3A3-208ENST00000489537 LACRTQ9GZZ8 138 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 AP5M1Q9H0R1 490 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 ISCUQ9H1K1 167 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 RPF1Q9H9Y2 349 aaKnown RBP6.82□□□□□ -1.32
SF3A3-208ENST00000489537 PLEKHA5Q9HAU0 1116 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 MRPL47Q9HD33 250 aaKnown RBP6.82□□□□□ -1.32
SF3A3-208ENST00000489537 PGPEP1Q9NXJ5 209 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 GTF3C4Q9UKN8 822 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 DERAQ9Y315 318 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.82□□□□□ -1.32
SF3A3-208ENST00000489537 CNTNAP2Q9UHC6 1331 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 SMCHD1A6NHR9 2005 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 ZNF236Q9UL36 1845 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 SMIM35A0A1B0GVV1 85 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 CCDC66A2RUB6 948 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 A6NJR5 290 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 ANKRD63C9JTQ0 380 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 INO80B-WBP1J3KQ70 363 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 FOXN3O00409 490 aaPredicted RBP6.81□□□□□ -1.32
SF3A3-208ENST00000489537 NDC80O14777 642 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 MSCO60682 206 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 MTA2O94776 668 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 C22orf31O95567 290 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 LSM8O95777 96 aaKnown RBP6.81□□□□□ -1.32
SF3A3-208ENST00000489537 PLEKP08567 350 aaPredicted RBP6.81□□□□□ -1.32
SF3A3-208ENST00000489537 SRGAP2CP0DJJ0 459 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 INSRRP14616 1297 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 ELNP15502 786 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 H2AFXP16104 143 aaPredicted RBP6.81□□□□□ -1.32
SF3A3-208ENST00000489537 ATF7P17544 494 aaPredicted RBP6.81□□□□□ -1.32
SF3A3-208ENST00000489537 POLR2BP30876 1174 aaKnown RBP6.81□□□□□ -1.32
SF3A3-208ENST00000489537 USP8P40818 1118 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 PPFIA1Q13136 1202 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 STILQ15468 1287 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 ELF2Q15723 593 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 ARHGAP44Q17R89 818 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 ERCC6LQ2NKX8 1250 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 GLIPR1L2Q4G1C9 344 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 TEX35Q5T0J7 233 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 MEI1Q5TIA1 1274 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 MFSD14CQ5VZR4 134 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 TAF2Q6P1X5 1199 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 TRMT1LQ7Z2T5 733 aaKnown RBP6.81□□□□□ -1.32
SF3A3-208ENST00000489537 PEX26Q7Z412 305 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 UBE2Q1Q7Z7E8 422 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 RHPN2Q8IUC4 686 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 KSR1Q8IVT5 923 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 HACE1Q8IYU2 909 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 MEIOBQ8N635 442 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 METTL13Q8N6R0 699 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 OR6J1Q8NGC5 347 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 CCDC26Q8TAB7 109 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 U2AF1L4Q8WU68 220 aaKnown RBP6.81□□□□□ -1.32
SF3A3-208ENST00000489537 SAAL1Q96ER3 474 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 SCLT1Q96NL6 688 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 OSBPL9Q96SU4 736 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 NCAPGQ9BPX3 1015 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 TSEN34Q9BSV6 310 aaKnown RBP6.81□□□□□ -1.32
SF3A3-208ENST00000489537 TARS2Q9BW92 718 aaKnown RBP6.81□□□□□ -1.32
SF3A3-208ENST00000489537 SEZ6LQ9BYH1 1024 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 FAM129AQ9BZQ8 928 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 CCDC113Q9H0I3 377 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 WNT8AQ9H1J5 351 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 CARD9Q9H257 536 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 CYP3A43Q9HB55 503 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 POLD4Q9HCU8 107 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 TOPORSQ9NS56 1045 aaPredicted RBP6.81□□□□□ -1.32
SF3A3-208ENST00000489537 SRRDQ9UH36 339 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 FEZ2Q9UHY8 353 aaPredicted RBP6.81□□□□□ -1.32
SF3A3-208ENST00000489537 FKBPLQ9UIM3 349 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 CPSF3Q9UKF6 684 aaKnown RBP6.81□□□□□ -1.32
SF3A3-208ENST00000489537 ZHX1Q9UKY1 873 aaPredicted RBP6.81□□□□□ -1.32
SF3A3-208ENST00000489537 KIAA1257Q9ULG3 409 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 TTC7AQ9ULT0 858 aaPredicted RBP6.81□□□□□ -1.32
SF3A3-208ENST00000489537 CNTN6Q9UQ52 1028 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 C2CD2Q9Y426 696 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 SCINQ9Y6U3 715 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 MGAMO43451 1857 aa6.81□□□□□ -1.32
SF3A3-208ENST00000489537 PLXNB2O15031 1838 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 MYH11P35749 1972 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 TMEM150BA6NC51 233 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 GOLGA8IPA6NC78 632 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 GOLGA8JA6NMD2 632 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 M0QZ92 97 aa6.8□□□□□ -1.32
SF3A3-208ENST00000489537 PGRMC1O00264 195 aaKnown RBP6.8□□□□□ -1.32
SF3A3-208ENST00000489537 DDX3XO00571 662 aaKnown RBP eCLIP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms