RNA–Protein interactions for RNA: ENST00000489212.2

LIME1-207, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 559 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-207ENST00000489212 ZNF280DQ6N043 979 aa22.92■■□□□ 1.26
LIME1-207ENST00000489212 ARMCX5Q6P1M9 558 aa22.92■■□□□ 1.26
LIME1-207ENST00000489212 OTOP3Q7RTS5 596 aa22.92■■□□□ 1.26
LIME1-207ENST00000489212 ZNF461Q8TAF7 563 aa22.92■■□□□ 1.26
LIME1-207ENST00000489212 SCFD1Q8WVM8 642 aa22.92■■□□□ 1.26
LIME1-207ENST00000489212 FAM84AQ96KN4 292 aa22.92■■□□□ 1.26
LIME1-207ENST00000489212 SCAND2PQ9GZW5 306 aaPredicted RBP22.92■■□□□ 1.26
LIME1-207ENST00000489212 GDPD2Q9HCC8 539 aa22.92■■□□□ 1.26
LIME1-207ENST00000489212 DPP3Q9NY33 737 aa22.92■■□□□ 1.26
LIME1-207ENST00000489212 RBAKQ9NYW8 714 aaPredicted RBP22.92■■□□□ 1.26
LIME1-207ENST00000489212 PRR33A8MZF0 331 aa22.91■■□□□ 1.26
LIME1-207ENST00000489212 TGFB1I1O43294 461 aa22.91■■□□□ 1.26
LIME1-207ENST00000489212 OAZ2O95190 189 aa22.91■■□□□ 1.26
LIME1-207ENST00000489212 COL9A1P20849 921 aa22.91■■□□□ 1.26
LIME1-207ENST00000489212 HOXA9P31269 272 aa22.91■■□□□ 1.26
LIME1-207ENST00000489212 NDUFA8P51970 172 aa22.91■■□□□ 1.26
LIME1-207ENST00000489212 NTHL1P78549 312 aa22.91■■□□□ 1.26
LIME1-207ENST00000489212 UVSSAQ2YD98 709 aa22.91■■□□□ 1.26
LIME1-207ENST00000489212 DSTYKQ6XUX3 929 aa22.91■■□□□ 1.26
LIME1-207ENST00000489212 PLCD3Q8N3E9 789 aa22.91■■□□□ 1.26
LIME1-207ENST00000489212 ACSF2Q96CM8 615 aaPredicted RBP22.91■■□□□ 1.26
LIME1-207ENST00000489212 SENP8Q96LD8 212 aa22.91■■□□□ 1.26
LIME1-207ENST00000489212 MYADMQ96S97 322 aa22.91■■□□□ 1.26
LIME1-207ENST00000489212 SLC39A2Q9NP94 309 aa22.91■■□□□ 1.26
LIME1-207ENST00000489212 NOTCH4Q99466 2003 aa22.91■■□□□ 1.26
LIME1-207ENST00000489212 YWHAHQ04917 246 aaPredicted RBP22.9■■□□□ 1.26
LIME1-207ENST00000489212 SCARA3Q6AZY7 606 aa22.9■■□□□ 1.26
LIME1-207ENST00000489212 TRIM67Q6ZTA4 783 aa22.9■■□□□ 1.26
LIME1-207ENST00000489212 GRASPQ7Z6J2 395 aaPredicted RBP22.9■■□□□ 1.26
LIME1-207ENST00000489212 NELFCDQ8IXH7 590 aa22.9■■□□□ 1.26
LIME1-207ENST00000489212 GPD1LQ8N335 351 aa22.9■■□□□ 1.26
LIME1-207ENST00000489212 NOC3LQ8WTT2 800 aaKnown RBP22.9■■□□□ 1.26
LIME1-207ENST00000489212 SMOC2Q9H3U7 446 aa22.9■■□□□ 1.26
LIME1-207ENST00000489212 GOLPH3LQ9H4A5 285 aa22.9■■□□□ 1.26
LIME1-207ENST00000489212 TSC2P49815 1807 aa22.89■■□□□ 1.26
LIME1-207ENST00000489212 UBE4BO95155 1302 aa22.89■■□□□ 1.26
LIME1-207ENST00000489212 A0A1W2PQ27 194 aa22.89■■□□□ 1.25
LIME1-207ENST00000489212 A0A1W2PQ64 194 aa22.89■■□□□ 1.25
LIME1-207ENST00000489212 A0A1W2PQD8 194 aa22.89■■□□□ 1.25
LIME1-207ENST00000489212 TULP1O00294 542 aaPredicted RBP22.89■■□□□ 1.25
LIME1-207ENST00000489212 SEC24AO95486 1093 aa22.89■■□□□ 1.25
LIME1-207ENST00000489212 ATF2P15336 505 aa22.89■■□□□ 1.25
LIME1-207ENST00000489212 TYMPP19971 482 aa22.89■■□□□ 1.25
LIME1-207ENST00000489212 SYKP43405 635 aa22.89■■□□□ 1.25
LIME1-207ENST00000489212 NT5DC4Q86YG4 428 aa22.89■■□□□ 1.25
LIME1-207ENST00000489212 CBWD2Q8IUF1 395 aa22.89■■□□□ 1.25
LIME1-207ENST00000489212 PDE11AQ9HCR9 933 aa22.89■■□□□ 1.25
LIME1-207ENST00000489212 AGPAT3Q9NRZ7 376 aa22.89■■□□□ 1.25
LIME1-207ENST00000489212 HSPBP1Q9NZL4 362 aa22.89■■□□□ 1.25
LIME1-207ENST00000489212 USP25Q9UHP3 1055 aa22.89■■□□□ 1.25
LIME1-207ENST00000489212 POU2F2P09086 479 aa22.88■■□□□ 1.25
LIME1-207ENST00000489212 GBP2P32456 591 aaPredicted RBP22.88■■□□□ 1.25
LIME1-207ENST00000489212 TFAMQ00059 246 aaKnown RBP22.88■■□□□ 1.25
LIME1-207ENST00000489212 BMT2Q1RMZ1 405 aa22.88■■□□□ 1.25
LIME1-207ENST00000489212 HFE2Q6ZVN8 426 aa22.88■■□□□ 1.25
LIME1-207ENST00000489212 RTL10Q7L3V2 364 aa22.88■■□□□ 1.25
LIME1-207ENST00000489212 GET4Q7L5D6 327 aaPredicted RBP22.88■■□□□ 1.25
LIME1-207ENST00000489212 FSIP1Q8NA03 581 aa22.88■■□□□ 1.25
LIME1-207ENST00000489212 BORCS6Q96GS4 357 aa22.88■■□□□ 1.25
LIME1-207ENST00000489212 HCFC1R1Q9NWW0 138 aa22.88■■□□□ 1.25
LIME1-207ENST00000489212 POLIQ9UNA4 740 aa22.88■■□□□ 1.25
LIME1-207ENST00000489212 SORCS3Q9UPU3 1222 aa22.88■■□□□ 1.25
LIME1-207ENST00000489212 ZDBF2Q9HCK1 2354 aa22.87■■□□□ 1.25
LIME1-207ENST00000489212 ARHGEF37A1IGU5 675 aa22.87■■□□□ 1.25
LIME1-207ENST00000489212 TMEM221A6NGB7 291 aa22.87■■□□□ 1.25
LIME1-207ENST00000489212 M0R296 226 aa22.87■■□□□ 1.25
LIME1-207ENST00000489212 KIAA0391O15091 583 aaKnown RBP22.87■■□□□ 1.25
LIME1-207ENST00000489212 CLIC2O15247 247 aa22.87■■□□□ 1.25
LIME1-207ENST00000489212 XYLBO75191 536 aa22.87■■□□□ 1.25
LIME1-207ENST00000489212 VNN2O95498 520 aa22.87■■□□□ 1.25
LIME1-207ENST00000489212 OR4Q2P0C623 313 aa22.87■■□□□ 1.25
LIME1-207ENST00000489212 ODC1P11926 461 aa22.87■■□□□ 1.25
LIME1-207ENST00000489212 SIGLEC14Q08ET2 396 aa22.87■■□□□ 1.25
LIME1-207ENST00000489212 STK4Q13043 487 aa22.87■■□□□ 1.25
LIME1-207ENST00000489212 KMT5BQ4FZB7 885 aa22.87■■□□□ 1.25
LIME1-207ENST00000489212 TPGS2Q68CL5 300 aa22.87■■□□□ 1.25
LIME1-207ENST00000489212 OVOS1Q6IE37 1185 aa22.87■■□□□ 1.25
LIME1-207ENST00000489212 RNF19BQ6ZMZ0 732 aa22.87■■□□□ 1.25
LIME1-207ENST00000489212 USP37Q86T82 979 aa22.87■■□□□ 1.25
LIME1-207ENST00000489212 TCEAL8Q8IYN2 117 aa22.87■■□□□ 1.25
LIME1-207ENST00000489212 C1orf127Q8N9H9 656 aa22.87■■□□□ 1.25
LIME1-207ENST00000489212 CXorf38Q8TB03 319 aa22.87■■□□□ 1.25
LIME1-207ENST00000489212 CYP4F11Q9HBI6 524 aa22.87■■□□□ 1.25
LIME1-207ENST00000489212 EPS15L1Q9UBC2 864 aa22.87■■□□□ 1.25
LIME1-207ENST00000489212 DNMT3BQ9UBC3 853 aaKnown RBP22.87■■□□□ 1.25
LIME1-207ENST00000489212 PTPRJQ12913 1337 aa22.86■■□□□ 1.25
LIME1-207ENST00000489212 PRR29P0C7W0 189 aa22.86■■□□□ 1.25
LIME1-207ENST00000489212 PAX3P23760 479 aa22.86■■□□□ 1.25
LIME1-207ENST00000489212 FSHRP23945 695 aa22.86■■□□□ 1.25
LIME1-207ENST00000489212 ELF1P32519 619 aa22.86■■□□□ 1.25
LIME1-207ENST00000489212 TAF6P49848 677 aa22.86■■□□□ 1.25
LIME1-207ENST00000489212 NUCB2P80303 420 aa22.86■■□□□ 1.25
LIME1-207ENST00000489212 ADCY1Q08828 1119 aa22.86■■□□□ 1.25
LIME1-207ENST00000489212 MTMR3Q13615 1198 aa22.86■■□□□ 1.25
LIME1-207ENST00000489212 LMBRD2Q68DH5 695 aaPredicted RBP22.86■■□□□ 1.25
LIME1-207ENST00000489212 KIAA0895Q8NCT3 520 aa22.86■■□□□ 1.25
LIME1-207ENST00000489212 ASIC4Q96FT7 647 aa22.86■■□□□ 1.25
LIME1-207ENST00000489212 TMEM209Q96SK2 561 aa22.86■■□□□ 1.25
LIME1-207ENST00000489212 KCNK12Q9HB15 430 aa22.86■■□□□ 1.25
LIME1-207ENST00000489212 AFF4Q9UHB7 1163 aaKnown RBP22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms