RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 FAM200AQ8TCP9 573 aa9.87□□□□□ -0.83
HDAC6-232ENST00000489053 NXPE3Q969Y0 559 aa9.87□□□□□ -0.83
HDAC6-232ENST00000489053 ANKRD36BP1Q96IX9 119 aa9.87□□□□□ -0.83
HDAC6-232ENST00000489053 SENP8Q96LD8 212 aa9.87□□□□□ -0.83
HDAC6-232ENST00000489053 ZNF512Q96ME7 567 aaPredicted RBP9.87□□□□□ -0.83
HDAC6-232ENST00000489053 FIZ1Q96SL8 496 aa9.87□□□□□ -0.83
HDAC6-232ENST00000489053 C11orf16Q9NQ32 467 aa9.87□□□□□ -0.83
HDAC6-232ENST00000489053 KBTBD4Q9NVX7 518 aa9.87□□□□□ -0.83
HDAC6-232ENST00000489053 USP25Q9UHP3 1055 aa9.87□□□□□ -0.83
HDAC6-232ENST00000489053 RCOR1Q9UKL0 485 aa9.87□□□□□ -0.83
HDAC6-232ENST00000489053 TIMM13Q9Y5L4 95 aaPredicted RBP9.87□□□□□ -0.83
HDAC6-232ENST00000489053 STYXL1Q9Y6J8 313 aa9.87□□□□□ -0.83
HDAC6-232ENST00000489053 UBE4BO95155 1302 aa9.86□□□□□ -0.83
HDAC6-232ENST00000489053 FRMD3A2A2Y4 597 aa9.86□□□□□ -0.83
HDAC6-232ENST00000489053 ZNF233A6NK53 670 aa9.86□□□□□ -0.83
HDAC6-232ENST00000489053 M0QZQ0 153 aa9.86□□□□□ -0.83
HDAC6-232ENST00000489053 ZNF197O14709 1029 aa9.86□□□□□ -0.83
HDAC6-232ENST00000489053 EIF3DO15371 548 aaKnown RBP eCLIP9.86□□□□□ -0.83
HDAC6-232ENST00000489053 PPP1R37O75864 691 aa9.86□□□□□ -0.83
HDAC6-232ENST00000489053 KIF20AO95235 890 aa9.86□□□□□ -0.83
HDAC6-232ENST00000489053 LAMP2P13473 410 aa9.86□□□□□ -0.83
HDAC6-232ENST00000489053 ATF2P15336 505 aa9.86□□□□□ -0.83
HDAC6-232ENST00000489053 PTPN2P17706 415 aa9.86□□□□□ -0.83
HDAC6-232ENST00000489053 TYMPP19971 482 aa9.86□□□□□ -0.83
HDAC6-232ENST00000489053 CASP5P51878 434 aa9.86□□□□□ -0.83
HDAC6-232ENST00000489053 EPHB3P54753 998 aa9.86□□□□□ -0.83
HDAC6-232ENST00000489053 LILRA4P59901 499 aa9.86□□□□□ -0.83
HDAC6-232ENST00000489053 TSPY1Q01534 308 aa9.86□□□□□ -0.83
HDAC6-232ENST00000489053 ADCY1Q08828 1119 aa9.86□□□□□ -0.83
HDAC6-232ENST00000489053 KCNA1Q09470 495 aa9.86□□□□□ -0.83
HDAC6-232ENST00000489053 MYO1EQ12965 1108 aa9.86□□□□□ -0.83
HDAC6-232ENST00000489053 VEPH1Q14D04 833 aa9.86□□□□□ -0.83
HDAC6-232ENST00000489053 E2F4Q16254 413 aa9.86□□□□□ -0.83
HDAC6-232ENST00000489053 C9orf57Q5W0N0 161 aa9.86□□□□□ -0.83
HDAC6-232ENST00000489053 UNC13DQ70J99 1090 aa9.86□□□□□ -0.83
HDAC6-232ENST00000489053 PDZD4Q76G19 769 aaPredicted RBP9.86□□□□□ -0.83
HDAC6-232ENST00000489053 BRSK2Q8IWQ3 736 aa9.86□□□□□ -0.83
HDAC6-232ENST00000489053 TCEAL8Q8IYN2 117 aa9.86□□□□□ -0.83
HDAC6-232ENST00000489053 GPD1LQ8N335 351 aa9.86□□□□□ -0.83
HDAC6-232ENST00000489053 FBXL6Q8N531 539 aa9.86□□□□□ -0.83
HDAC6-232ENST00000489053 GOLGA5Q8TBA6 731 aa9.86□□□□□ -0.83
HDAC6-232ENST00000489053 GCNAQ96QF7 691 aa9.86□□□□□ -0.83
HDAC6-232ENST00000489053 FNBP1Q96RU3 617 aa9.86□□□□□ -0.83
HDAC6-232ENST00000489053 PRRX2Q99811 253 aa9.86□□□□□ -0.83
HDAC6-232ENST00000489053 C7orf25Q9BPX7 421 aa9.86□□□□□ -0.83
HDAC6-232ENST00000489053 CORO1BQ9BR76 489 aa9.86□□□□□ -0.83
HDAC6-232ENST00000489053 BLZF1Q9H2G9 400 aa9.86□□□□□ -0.83
HDAC6-232ENST00000489053 SLITRK6Q9H5Y7 841 aa9.86□□□□□ -0.83
HDAC6-232ENST00000489053 KCNK12Q9HB15 430 aa9.86□□□□□ -0.83
HDAC6-232ENST00000489053 KIAA1586Q9HCI6 787 aa9.86□□□□□ -0.83
HDAC6-232ENST00000489053 ASAH2Q9NR71 780 aa9.86□□□□□ -0.83
HDAC6-232ENST00000489053 EPS15L1Q9UBC2 864 aa9.86□□□□□ -0.83
HDAC6-232ENST00000489053 AFF4Q9UHB7 1163 aaKnown RBP9.86□□□□□ -0.83
HDAC6-232ENST00000489053 RAPGEFL1Q9UHV5 662 aa9.86□□□□□ -0.83
HDAC6-232ENST00000489053 CDH7Q9ULB5 785 aa9.86□□□□□ -0.83
HDAC6-232ENST00000489053 INSL5Q9Y5Q6 135 aa9.86□□□□□ -0.83
HDAC6-232ENST00000489053 PVALEFA0A1B0GWK0 134 aa9.85□□□□□ -0.83
HDAC6-232ENST00000489053 WDR27A2RRH5 827 aa9.85□□□□□ -0.83
HDAC6-232ENST00000489053 CYB561D2O14569 222 aa9.85□□□□□ -0.83
HDAC6-232ENST00000489053 MEFVO15553 781 aaPredicted RBP9.85□□□□□ -0.83
HDAC6-232ENST00000489053 FAM189A1O60320 539 aa9.85□□□□□ -0.83
HDAC6-232ENST00000489053 HUS1O60921 280 aa9.85□□□□□ -0.83
HDAC6-232ENST00000489053 OAZ2O95190 189 aa9.85□□□□□ -0.83
HDAC6-232ENST00000489053 POU2F2P09086 479 aa9.85□□□□□ -0.83
HDAC6-232ENST00000489053 SLFN14P0C7P3 912 aa9.85□□□□□ -0.83
HDAC6-232ENST00000489053 PFKFB1P16118 471 aa9.85□□□□□ -0.83
HDAC6-232ENST00000489053 CMA1P23946 247 aa9.85□□□□□ -0.83
HDAC6-232ENST00000489053 IGFBP6P24592 240 aaPredicted RBP9.85□□□□□ -0.83
HDAC6-232ENST00000489053 ADSSP30520 456 aa9.85□□□□□ -0.83
HDAC6-232ENST00000489053 POLR2BP30876 1174 aaKnown RBP9.85□□□□□ -0.83
HDAC6-232ENST00000489053 SYKP43405 635 aa9.85□□□□□ -0.83
HDAC6-232ENST00000489053 CYP2J2P51589 502 aa9.85□□□□□ -0.83
HDAC6-232ENST00000489053 NTHL1P78549 312 aa9.85□□□□□ -0.83
HDAC6-232ENST00000489053 NUCB2P80303 420 aa9.85□□□□□ -0.83
HDAC6-232ENST00000489053 RBP5P82980 135 aa9.85□□□□□ -0.83
HDAC6-232ENST00000489053 BFSP1Q12934 665 aa9.85□□□□□ -0.83
HDAC6-232ENST00000489053 ZBTB6Q15916 424 aa9.85□□□□□ -0.83
HDAC6-232ENST00000489053 CD300LGQ6UXG3 332 aa9.85□□□□□ -0.83
HDAC6-232ENST00000489053 RSPO2Q6UXX9 243 aaPredicted RBP9.85□□□□□ -0.83
HDAC6-232ENST00000489053 NELFCDQ8IXH7 590 aa9.85□□□□□ -0.83
HDAC6-232ENST00000489053 CSGALNACT2Q8N6G5 542 aa9.85□□□□□ -0.83
HDAC6-232ENST00000489053 FSIP1Q8NA03 581 aa9.85□□□□□ -0.83
HDAC6-232ENST00000489053 LEMD2Q8NC56 503 aa9.85□□□□□ -0.83
HDAC6-232ENST00000489053 FLCNQ8NFG4 579 aa9.85□□□□□ -0.83
HDAC6-232ENST00000489053 LEO1Q8WVC0 666 aaPredicted RBP9.85□□□□□ -0.83
HDAC6-232ENST00000489053 ING5Q8WYH8 240 aa9.85□□□□□ -0.83
HDAC6-232ENST00000489053 HPS3Q969F9 1004 aa9.85□□□□□ -0.83
HDAC6-232ENST00000489053 PGLYRP2Q96PD5 576 aa9.85□□□□□ -0.83
HDAC6-232ENST00000489053 MYADMQ96S97 322 aa9.85□□□□□ -0.83
HDAC6-232ENST00000489053 CBWD1Q9BRT8 395 aa9.85□□□□□ -0.83
HDAC6-232ENST00000489053 SLC39A2Q9NP94 309 aa9.85□□□□□ -0.83
HDAC6-232ENST00000489053 CGNQ9P2M7 1197 aaKnown RBP9.85□□□□□ -0.83
HDAC6-232ENST00000489053 ITGA11Q9UKX5 1188 aa9.85□□□□□ -0.83
HDAC6-232ENST00000489053 AGAP1Q9UPQ3 857 aa9.85□□□□□ -0.83
HDAC6-232ENST00000489053 MUC6Q6W4X9 2439 aa9.84□□□□□ -0.83
HDAC6-232ENST00000489053 A0A1B0GVL5 298 aa9.84□□□□□ -0.83
HDAC6-232ENST00000489053 KPNA7A9QM74 516 aa9.84□□□□□ -0.83
HDAC6-232ENST00000489053 EXOC3O60645 756 aa9.84□□□□□ -0.83
HDAC6-232ENST00000489053 PRPF40AO75400 957 aaKnown RBP9.84□□□□□ -0.83
HDAC6-232ENST00000489053 ABLIM3O94929 683 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms