RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 ANGPTL2Q9UKU9 493 aa17.09■□□□□ 0.33
MCF2L-229ENST00000488765 R3HDM2Q9Y2K5 976 aaKnown RBP17.09■□□□□ 0.33
MCF2L-229ENST00000488765 PDE5AO76074 875 aa17.09■□□□□ 0.33
MCF2L-229ENST00000488765 ZSCAN5DPP0CG00 497 aa17.09■□□□□ 0.33
MCF2L-229ENST00000488765 TROVE2P10155 538 aaKnown RBP eCLIP17.09■□□□□ 0.33
MCF2L-229ENST00000488765 NAA20P61599 178 aa17.09■□□□□ 0.33
MCF2L-229ENST00000488765 PABPC4Q13310 644 aaKnown RBP eCLIP17.09■□□□□ 0.33
MCF2L-229ENST00000488765 EFTUD2Q15029 972 aaKnown RBP eCLIP17.09■□□□□ 0.335e-6■■■■□ 22.6
MCF2L-229ENST00000488765 DPY19L2P1Q6NXN4 242 aa17.09■□□□□ 0.33
MCF2L-229ENST00000488765 GSTA5Q7RTV2 222 aa17.09■□□□□ 0.33
MCF2L-229ENST00000488765 PROM2Q8N271 834 aa17.09■□□□□ 0.33
MCF2L-229ENST00000488765 POU5F2Q8N7G0 328 aa17.09■□□□□ 0.33
MCF2L-229ENST00000488765 ZNF512BQ96KM6 892 aaPredicted RBP17.09■□□□□ 0.33
MCF2L-229ENST00000488765 CYP4F11Q9HBI6 524 aa17.09■□□□□ 0.33
MCF2L-229ENST00000488765 USP29Q9HBJ7 922 aa17.09■□□□□ 0.33
MCF2L-229ENST00000488765 SIX2Q9NPC8 291 aa17.09■□□□□ 0.33
MCF2L-229ENST00000488765 BARHL2Q9NY43 387 aa17.09■□□□□ 0.33
MCF2L-229ENST00000488765 FAF1Q9UNN5 650 aaPredicted RBP17.09■□□□□ 0.33
MCF2L-229ENST00000488765 RSPH10B2B2RC85 870 aa17.09■□□□□ 0.33
MCF2L-229ENST00000488765 RPS6KA4O75676 772 aa17.09■□□□□ 0.33
MCF2L-229ENST00000488765 RSPH10BP0C881 870 aa17.09■□□□□ 0.33
MCF2L-229ENST00000488765 SLURP2P0DP57 97 aa17.09■□□□□ 0.33
MCF2L-229ENST00000488765 ATF2P15336 505 aa17.09■□□□□ 0.33
MCF2L-229ENST00000488765 SERPINB6P35237 376 aa17.09■□□□□ 0.33
MCF2L-229ENST00000488765 ATXN3P54252 364 aaPredicted RBP17.09■□□□□ 0.33
MCF2L-229ENST00000488765 PICALMQ13492 652 aa17.09■□□□□ 0.33
MCF2L-229ENST00000488765 BTG3Q14201 252 aaPredicted RBP17.09■□□□□ 0.33
MCF2L-229ENST00000488765 NADK2Q4G0N4 442 aa17.09■□□□□ 0.33
MCF2L-229ENST00000488765 C6orf183Q5T699 404 aa17.09■□□□□ 0.33
MCF2L-229ENST00000488765 TSHZ1Q6ZSZ6 1077 aa17.09■□□□□ 0.33
MCF2L-229ENST00000488765 SLF2Q8IX21 1173 aa17.09■□□□□ 0.33
MCF2L-229ENST00000488765 RNF169Q8NCN4 708 aa17.09■□□□□ 0.33
MCF2L-229ENST00000488765 OR6Y1Q8NGX8 325 aa17.09■□□□□ 0.33
MCF2L-229ENST00000488765 ZFP28Q8NHY6 868 aa17.09■□□□□ 0.33
MCF2L-229ENST00000488765 TTC17Q96AE7 1141 aa17.09■□□□□ 0.33
MCF2L-229ENST00000488765 CCDC77Q9BR77 488 aa17.09■□□□□ 0.33
MCF2L-229ENST00000488765 OXCT2Q9BYC2 517 aaPredicted RBP17.09■□□□□ 0.33
MCF2L-229ENST00000488765 MAGEF1Q9HAY2 307 aa17.09■□□□□ 0.33
MCF2L-229ENST00000488765 ZNF148Q9UQR1 794 aa17.09■□□□□ 0.33
MCF2L-229ENST00000488765 ITGB4P16144 1822 aa17.09■□□□□ 0.33
MCF2L-229ENST00000488765 ATRNO75882 1429 aa17.09■□□□□ 0.33
MCF2L-229ENST00000488765 FOXN3O00409 490 aaPredicted RBP17.08■□□□□ 0.33
MCF2L-229ENST00000488765 SPTLC1O15269 473 aa17.08■□□□□ 0.33
MCF2L-229ENST00000488765 MYL2P10916 166 aa17.08■□□□□ 0.33
MCF2L-229ENST00000488765 VCLP18206 1134 aa17.08■□□□□ 0.33
MCF2L-229ENST00000488765 NFKBIAP25963 317 aa17.08■□□□□ 0.33
MCF2L-229ENST00000488765 CYLC2Q14093 348 aaPredicted RBP17.08■□□□□ 0.33
MCF2L-229ENST00000488765 TRIP10Q15642 601 aa17.08■□□□□ 0.33
MCF2L-229ENST00000488765 PDK4Q16654 411 aa17.08■□□□□ 0.33
MCF2L-229ENST00000488765 CLEC4GQ6UXB4 293 aa17.08■□□□□ 0.33
MCF2L-229ENST00000488765 RAVER1Q8IY67 606 aaKnown RBP17.08■□□□□ 0.33
MCF2L-229ENST00000488765 PTCD3Q96EY7 689 aaKnown RBP17.08■□□□□ 0.33
MCF2L-229ENST00000488765 ABHD8Q96I13 439 aa17.08■□□□□ 0.33
MCF2L-229ENST00000488765 PIGSQ96S52 555 aa17.08■□□□□ 0.33
MCF2L-229ENST00000488765 LRRC4BQ9NT99 713 aa17.08■□□□□ 0.33
MCF2L-229ENST00000488765 UBAP1Q9NZ09 502 aa17.08■□□□□ 0.33
MCF2L-229ENST00000488765 PPARGC1AQ9UBK2 798 aaKnown RBP17.08■□□□□ 0.33
MCF2L-229ENST00000488765 MAD2L2Q9UI95 211 aa17.08■□□□□ 0.33
MCF2L-229ENST00000488765 TTLL13PA6NNM8 815 aa17.08■□□□□ 0.32
MCF2L-229ENST00000488765 H3BSA7 217 aa17.08■□□□□ 0.32
MCF2L-229ENST00000488765 CTNNA2P26232 953 aa17.08■□□□□ 0.32
MCF2L-229ENST00000488765 PDK3Q15120 406 aa17.08■□□□□ 0.32
MCF2L-229ENST00000488765 GSTA3Q16772 222 aa17.08■□□□□ 0.32
MCF2L-229ENST00000488765 CCDC174Q6PII3 467 aa17.08■□□□□ 0.32
MCF2L-229ENST00000488765 TRABD2AQ86V40 505 aa17.08■□□□□ 0.32
MCF2L-229ENST00000488765 PPP2R3CQ969Q6 453 aa17.08■□□□□ 0.32
MCF2L-229ENST00000488765 NSUN4Q96CB9 384 aaKnown RBP17.08■□□□□ 0.32
MCF2L-229ENST00000488765 MTBPQ96DY7 904 aa17.08■□□□□ 0.32
MCF2L-229ENST00000488765 RIOK1Q9BRS2 568 aaKnown RBP17.08■□□□□ 0.32
MCF2L-229ENST00000488765 KCTD10Q9H3F6 313 aa17.08■□□□□ 0.32
MCF2L-229ENST00000488765 MYO3BQ8WXR4 1341 aa17.08■□□□□ 0.32
MCF2L-229ENST00000488765 SYNGAP1Q96PV0 1343 aa17.08■□□□□ 0.32
MCF2L-229ENST00000488765 A0A1B0GTW7 788 aa17.08■□□□□ 0.32
MCF2L-229ENST00000488765 UFL1O94874 794 aa17.08■□□□□ 0.32
MCF2L-229ENST00000488765 TMEM253P0C7T8 217 aa17.08■□□□□ 0.32
MCF2L-229ENST00000488765 HOXD12P35452 270 aa17.08■□□□□ 0.32
MCF2L-229ENST00000488765 RASA3Q14644 834 aa17.08■□□□□ 0.32
MCF2L-229ENST00000488765 EPHA7Q15375 998 aa17.08■□□□□ 0.32
MCF2L-229ENST00000488765 ZFYVE27Q5T4F4 411 aa17.08■□□□□ 0.32
MCF2L-229ENST00000488765 SYCP2LQ5T4T6 812 aa17.08■□□□□ 0.32
MCF2L-229ENST00000488765 KLC3Q6P597 504 aa17.08■□□□□ 0.32
MCF2L-229ENST00000488765 C1orf228Q6PIY5 440 aa17.08■□□□□ 0.32
MCF2L-229ENST00000488765 SLC30A10Q6XR72 485 aa17.08■□□□□ 0.32
MCF2L-229ENST00000488765 SLC15A3Q8IY34 581 aa17.08■□□□□ 0.32
MCF2L-229ENST00000488765 STKLD1Q8NE28 680 aa17.08■□□□□ 0.32
MCF2L-229ENST00000488765 SLC30A5Q8TAD4 765 aa17.08■□□□□ 0.32
MCF2L-229ENST00000488765 ANKFY1Q9P2R3 1169 aa17.08■□□□□ 0.32
MCF2L-229ENST00000488765 SLC7A8Q9UHI5 535 aa17.08■□□□□ 0.32
MCF2L-229ENST00000488765 DDX60Q8IY21 1712 aaKnown RBP17.07■□□□□ 0.32
MCF2L-229ENST00000488765 ABCB11O95342 1321 aa17.07■□□□□ 0.32
MCF2L-229ENST00000488765 C2CD2LO14523 706 aa17.07■□□□□ 0.32
MCF2L-229ENST00000488765 FCHO1O14526 889 aa17.07■□□□□ 0.32
MCF2L-229ENST00000488765 TRAFD1O14545 582 aaPredicted RBP17.07■□□□□ 0.32
MCF2L-229ENST00000488765 ALDH18A1P54886 795 aaKnown RBP17.07■□□□□ 0.32
MCF2L-229ENST00000488765 AP2B1P63010 937 aa17.07■□□□□ 0.32
MCF2L-229ENST00000488765 PEX6Q13608 980 aa17.07■□□□□ 0.32
MCF2L-229ENST00000488765 ANKDD1AQ495B1 522 aa17.07■□□□□ 0.32
MCF2L-229ENST00000488765 LLGL2Q6P1M3 1020 aa17.07■□□□□ 0.32
MCF2L-229ENST00000488765 FBXL19Q6PCT2 694 aa17.07■□□□□ 0.32
MCF2L-229ENST00000488765 METTL25Q8N6Q8 603 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms