RNA–Protein interactions for RNA: ENST00000488758.1

APOBEC3A-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 2

Gene APOBEC3A, Length 344 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-203ENST00000488758 FERP16591 822 aa8.12□□□□□ -1.11
APOBEC3A-203ENST00000488758 ATF7P17544 494 aaPredicted RBP8.12□□□□□ -1.11
APOBEC3A-203ENST00000488758 CYP3A5P20815 502 aa8.12□□□□□ -1.11
APOBEC3A-203ENST00000488758 POLR2BP30876 1174 aaKnown RBP8.12□□□□□ -1.11
APOBEC3A-203ENST00000488758 HNRNPH3P31942 346 aaKnown RBP8.12□□□□□ -1.11
APOBEC3A-203ENST00000488758 SOX5P35711 763 aa8.12□□□□□ -1.11
APOBEC3A-203ENST00000488758 MLH1P40692 756 aa8.12□□□□□ -1.11
APOBEC3A-203ENST00000488758 USP8P40818 1118 aa8.12□□□□□ -1.11
APOBEC3A-203ENST00000488758 GUCY2FP51841 1108 aa8.12□□□□□ -1.11
APOBEC3A-203ENST00000488758 FAM189BP81408 668 aa8.12□□□□□ -1.11
APOBEC3A-203ENST00000488758 CCZ1BP86790 482 aa8.12□□□□□ -1.11
APOBEC3A-203ENST00000488758 CCZ1P86791 482 aaPredicted RBP8.12□□□□□ -1.11
APOBEC3A-203ENST00000488758 ARID5AQ03989 594 aa8.12□□□□□ -1.11
APOBEC3A-203ENST00000488758 KLHL30Q0D2K2 578 aa8.12□□□□□ -1.11
APOBEC3A-203ENST00000488758 MYO1EQ12965 1108 aa8.12□□□□□ -1.11
APOBEC3A-203ENST00000488758 IKBKEQ14164 716 aa8.12□□□□□ -1.11
APOBEC3A-203ENST00000488758 GPNMBQ14956 572 aa8.12□□□□□ -1.11
APOBEC3A-203ENST00000488758 TDRD12Q587J7 1177 aaKnown RBP8.12□□□□□ -1.11
APOBEC3A-203ENST00000488758 ZNF667Q5HYK9 610 aa8.12□□□□□ -1.11
APOBEC3A-203ENST00000488758 SPOPLQ6IQ16 392 aa8.12□□□□□ -1.11
APOBEC3A-203ENST00000488758 AGMOQ6ZNB7 445 aa8.12□□□□□ -1.11
APOBEC3A-203ENST00000488758 RPUSD2Q8IZ73 545 aaKnown RBP8.12□□□□□ -1.11
APOBEC3A-203ENST00000488758 TMEM199Q8N511 208 aa8.12□□□□□ -1.11
APOBEC3A-203ENST00000488758 HELQQ8TDG4 1101 aa8.12□□□□□ -1.11
APOBEC3A-203ENST00000488758 JAKMIP2Q96AA8 810 aa8.12□□□□□ -1.11
APOBEC3A-203ENST00000488758 HPDLQ96IR7 371 aa8.12□□□□□ -1.11
APOBEC3A-203ENST00000488758 FAXDC2Q96IV6 333 aa8.12□□□□□ -1.11
APOBEC3A-203ENST00000488758 ZFRQ96KR1 1074 aaKnown RBP8.12□□□□□ -1.11
APOBEC3A-203ENST00000488758 ZMAT2Q96NC0 199 aaKnown RBP8.12□□□□□ -1.11
APOBEC3A-203ENST00000488758 WNT8AQ9H1J5 351 aa8.12□□□□□ -1.11
APOBEC3A-203ENST00000488758 CXCL16Q9H2A7 254 aa8.12□□□□□ -1.11
APOBEC3A-203ENST00000488758 KCNF1Q9H3M0 494 aa8.12□□□□□ -1.11
APOBEC3A-203ENST00000488758 DEF6Q9H4E7 631 aa8.12□□□□□ -1.11
APOBEC3A-203ENST00000488758 RNF19AQ9NV58 838 aa8.12□□□□□ -1.11
APOBEC3A-203ENST00000488758 AIPL1Q9NZN9 384 aa8.12□□□□□ -1.11
APOBEC3A-203ENST00000488758 PRKAG2Q9UGJ0 569 aa8.12□□□□□ -1.11
APOBEC3A-203ENST00000488758 PLAGL2Q9UPG8 496 aa8.12□□□□□ -1.11
APOBEC3A-203ENST00000488758 ZKSCAN5Q9Y2L8 839 aa8.12□□□□□ -1.11
APOBEC3A-203ENST00000488758 PCDHB7Q9Y5E2 793 aa8.12□□□□□ -1.11
APOBEC3A-203ENST00000488758 CENPFP49454 3210 aa8.12□□□□□ -1.11
APOBEC3A-203ENST00000488758 ANK1P16157 1881 aa8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 TRIM43BA6NCK2 446 aa8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 ARL5CA6NH57 179 aa8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 MEIS3P2A8K0S8 358 aa8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 F8VZ95 297 aa8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 RBAK-RBAKDNI3L0D1 243 aa8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 ARHGAP6O43182 974 aa8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 GFPT2O94808 682 aa8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 ASS1P00966 412 aaKnown RBP8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 SERPING1P05155 500 aa8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 KRT5P13647 590 aa8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 FECHP22830 423 aa8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 MSNP26038 577 aaKnown RBP8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 CYLC1P35663 651 aaPredicted RBP8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 PNPLA4P41247 253 aa8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 JAM2P57087 298 aa8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 YWHAEP62258 255 aaKnown RBP8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 TNNC1P63316 161 aa8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 NOP14P78316 857 aaKnown RBP8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 CDK17Q00537 523 aa8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 GCNT1Q02742 428 aa8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 CUL2Q13617 745 aa8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 MEA1Q16626 185 aa8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 WDR72Q3MJ13 1102 aa8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 C9orf57Q5W0N0 161 aa8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 CNKSR3Q6P9H4 555 aa8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 GLB1LQ6UWU2 654 aa8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 ZNF598Q86UK7 904 aaKnown RBP8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 ZSCAN30Q86W11 494 aa8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 GPIHBP1Q8IV16 184 aa8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 ABI1Q8IZP0 508 aa8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 LRRC52Q8N7C0 313 aa8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 URGCPQ8TCY9 931 aa8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 KAT5Q92993 513 aa8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 C18orf25Q96B23 403 aaPredicted RBP8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 ELMO3Q96BJ8 720 aa8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 TRIM43Q96BQ3 446 aaPredicted RBP8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 CCDC42Q96M95 316 aa8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 ZFP42Q96MM3 310 aa8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 ZNF560Q96MR9 790 aa8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 CHP1Q99653 195 aa8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 NIF3L1Q9GZT8 377 aa8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 ELAC1Q9H777 363 aaKnown RBP8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 NHEJ1Q9H9Q4 299 aaPredicted RBP8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 APOBEC3GQ9HC16 384 aaKnown RBP8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 TMEM161AQ9NX61 479 aa8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 MIOSQ9NXC5 875 aa8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 NXF1Q9UBU9 619 aaKnown RBP8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 TUBGCP4Q9UGJ1 667 aa8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 SIX4Q9UIU6 781 aa8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 AJAP1Q9UKB5 411 aaPredicted RBP8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 INPP5FQ9Y2H2 1132 aa8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 NUB1Q9Y5A7 615 aa8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 BZW2Q9Y6E2 419 aaKnown RBP8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 TRIP11Q15643 1979 aa8.11□□□□□ -1.11
APOBEC3A-203ENST00000488758 TRIOBPQ9H2D6 2365 aa8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 SSU72P8A0A1W2PR75 194 aa8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 SOWAHDA6NJG2 315 aa8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 C3orf80F5H4A9 247 aa8.1□□□□□ -1.11
APOBEC3A-203ENST00000488758 H0YGN5 161 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms