RNA–Protein interactions for RNA: ENST00000488733.1

ATP1A1-208, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

TSL 2

Gene ATP1A1, Length 1,728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-208ENST00000488733 ZNF667Q5HYK9 610 aa21.54■■□□□ 1.04
ATP1A1-208ENST00000488733 PDCL2Q8N4E4 241 aa21.54■■□□□ 1.04
ATP1A1-208ENST00000488733 TSEN34Q9BSV6 310 aaKnown RBP21.54■■□□□ 1.04
ATP1A1-208ENST00000488733 VRTNQ9H8Y1 702 aa21.54■■□□□ 1.04
ATP1A1-208ENST00000488733 OSGEPQ9NPF4 335 aa21.54■■□□□ 1.04
ATP1A1-208ENST00000488733 ARGLU1Q9NWB6 273 aaPredicted RBP21.54■■□□□ 1.04
ATP1A1-208ENST00000488733 CTTNBP2NLQ9P2B4 639 aa21.54■■□□□ 1.04
ATP1A1-208ENST00000488733 GTF3C4Q9UKN8 822 aa21.54■■□□□ 1.04
ATP1A1-208ENST00000488733 AMFRQ9UKV5 643 aa21.54■■□□□ 1.04
ATP1A1-208ENST00000488733 ITGA11Q9UKX5 1188 aa21.54■■□□□ 1.04
ATP1A1-208ENST00000488733 MEFVO15553 781 aaPredicted RBP21.53■■□□□ 1.04
ATP1A1-208ENST00000488733 KIF4AO95239 1232 aa21.53■■□□□ 1.04
ATP1A1-208ENST00000488733 CYP1A2P05177 515 aa21.53■■□□□ 1.04
ATP1A1-208ENST00000488733 TUBBP07437 444 aa21.53■■□□□ 1.04
ATP1A1-208ENST00000488733 UNGP13051 313 aaPredicted RBP21.53■■□□□ 1.04
ATP1A1-208ENST00000488733 YARSP54577 528 aaKnown RBP21.53■■□□□ 1.04
ATP1A1-208ENST00000488733 CFAP221Q4G0U5 840 aa21.53■■□□□ 1.04
ATP1A1-208ENST00000488733 RSPH3Q86UC2 560 aa21.53■■□□□ 1.04
ATP1A1-208ENST00000488733 ARRDC4Q8NCT1 418 aa21.53■■□□□ 1.04
ATP1A1-208ENST00000488733 PBKQ96KB5 322 aa21.53■■□□□ 1.04
ATP1A1-208ENST00000488733 ABCB6Q9NP58 842 aa21.53■■□□□ 1.04
ATP1A1-208ENST00000488733 CISHQ9NSE2 258 aa21.53■■□□□ 1.04
ATP1A1-208ENST00000488733 SIX4Q9UIU6 781 aa21.53■■□□□ 1.04
ATP1A1-208ENST00000488733 STXBP5LQ9Y2K9 1186 aa21.53■■□□□ 1.04
ATP1A1-208ENST00000488733 GRIN2DO15399 1336 aa21.53■■□□□ 1.04
ATP1A1-208ENST00000488733 BUB1BO60566 1050 aaPredicted RBP21.52■■□□□ 1.04
ATP1A1-208ENST00000488733 CYP1A1P04798 512 aaPredicted RBP21.52■■□□□ 1.04
ATP1A1-208ENST00000488733 MYBL1P10243 752 aa21.52■■□□□ 1.04
ATP1A1-208ENST00000488733 P4HA1P13674 534 aa21.52■■□□□ 1.04
ATP1A1-208ENST00000488733 SCARA3Q6AZY7 606 aa21.52■■□□□ 1.04
ATP1A1-208ENST00000488733 NT5DC3Q86UY8 548 aa21.52■■□□□ 1.04
ATP1A1-208ENST00000488733 GLT1D1Q96MS3 346 aa21.52■■□□□ 1.04
ATP1A1-208ENST00000488733 FAM124BQ9H5Z6 455 aaPredicted RBP21.52■■□□□ 1.04
ATP1A1-208ENST00000488733 UVRAGQ9P2Y5 699 aa21.52■■□□□ 1.04
ATP1A1-208ENST00000488733 STAU1O95793 577 aaKnown RBP21.52■■□□□ 1.03
ATP1A1-208ENST00000488733 ITGB3P05106 788 aa21.52■■□□□ 1.03
ATP1A1-208ENST00000488733 H2AFXP16104 143 aaPredicted RBP21.52■■□□□ 1.03
ATP1A1-208ENST00000488733 CXCR5P32302 372 aa21.52■■□□□ 1.03
ATP1A1-208ENST00000488733 ASPAP45381 313 aa21.52■■□□□ 1.03
ATP1A1-208ENST00000488733 RBP5P82980 135 aa21.52■■□□□ 1.03
ATP1A1-208ENST00000488733 ITGA7Q13683 1181 aa21.52■■□□□ 1.03
ATP1A1-208ENST00000488733 TSPAN18Q96SJ8 248 aa21.52■■□□□ 1.03
ATP1A1-208ENST00000488733 PSMB7Q99436 277 aa21.52■■□□□ 1.03
ATP1A1-208ENST00000488733 SELENOOQ9BVL4 669 aa21.52■■□□□ 1.03
ATP1A1-208ENST00000488733 BCO2Q9BYV7 579 aa21.52■■□□□ 1.03
ATP1A1-208ENST00000488733 CELF4Q9BZC1 486 aaKnown RBP21.52■■□□□ 1.03
ATP1A1-208ENST00000488733 TRIM6Q9C030 488 aaPredicted RBP21.52■■□□□ 1.03
ATP1A1-208ENST00000488733 PAK6Q9NQU5 681 aaPredicted RBP21.52■■□□□ 1.03
ATP1A1-208ENST00000488733 M0QZ92 97 aa21.51■■□□□ 1.03
ATP1A1-208ENST00000488733 PDE2AO00408 941 aaPredicted RBP21.51■■□□□ 1.03
ATP1A1-208ENST00000488733 THAP12O43422 761 aa21.51■■□□□ 1.03
ATP1A1-208ENST00000488733 MYCP01106 439 aaPredicted RBP21.51■■□□□ 1.03
ATP1A1-208ENST00000488733 CENPCQ03188 943 aa21.51■■□□□ 1.03
ATP1A1-208ENST00000488733 C11orf63Q6NUN7 778 aa21.51■■□□□ 1.03
ATP1A1-208ENST00000488733 SERINC5Q86VE9 423 aa21.51■■□□□ 1.03
ATP1A1-208ENST00000488733 MSANTD4Q8NCY6 345 aa21.51■■□□□ 1.03
ATP1A1-208ENST00000488733 CXorf38Q8TB03 319 aa21.51■■□□□ 1.03
ATP1A1-208ENST00000488733 ZNF653Q96CK0 615 aa21.51■■□□□ 1.03
ATP1A1-208ENST00000488733 VCPIP1Q96JH7 1222 aa21.51■■□□□ 1.03
ATP1A1-208ENST00000488733 CYP3A43Q9HB55 503 aa21.51■■□□□ 1.03
ATP1A1-208ENST00000488733 DPP3Q9NY33 737 aa21.51■■□□□ 1.03
ATP1A1-208ENST00000488733 COG5Q9UP83 839 aa21.51■■□□□ 1.03
ATP1A1-208ENST00000488733 TRIP12Q14669 1992 aaPredicted RBP21.51■■□□□ 1.03
ATP1A1-208ENST00000488733 FRMPD3Q5JV73 1810 aa21.5■■□□□ 1.03
ATP1A1-208ENST00000488733 ZSCAN20P17040 1043 aaPredicted RBP21.5■■□□□ 1.03
ATP1A1-208ENST00000488733 NSFP46459 744 aaKnown RBP21.5■■□□□ 1.03
ATP1A1-208ENST00000488733 MTFR1Q15390 333 aa21.5■■□□□ 1.03
ATP1A1-208ENST00000488733 WDR72Q3MJ13 1102 aa21.5■■□□□ 1.03
ATP1A1-208ENST00000488733 ZNF606Q8WXB4 792 aa21.5■■□□□ 1.03
ATP1A1-208ENST00000488733 KIF12Q96FN5 646 aa21.5■■□□□ 1.03
ATP1A1-208ENST00000488733 HES6Q96HZ4 224 aa21.5■■□□□ 1.03
ATP1A1-208ENST00000488733 AVENQ9NQS1 362 aaPredicted RBP21.5■■□□□ 1.03
ATP1A1-208ENST00000488733 SNTG2Q9NY99 539 aa21.5■■□□□ 1.03
ATP1A1-208ENST00000488733 NXF1Q9UBU9 619 aaKnown RBP21.5■■□□□ 1.03
ATP1A1-208ENST00000488733 PACSIN2Q9UNF0 486 aaPredicted RBP21.5■■□□□ 1.03
ATP1A1-208ENST00000488733 PIN4Q9Y237 131 aaKnown RBP21.5■■□□□ 1.03
ATP1A1-208ENST00000488733 KBTBD13C9JR72 458 aa21.49■■□□□ 1.03
ATP1A1-208ENST00000488733 KCNK3O14649 394 aa21.49■■□□□ 1.03
ATP1A1-208ENST00000488733 WEE2P0C1S8 567 aa21.49■■□□□ 1.03
ATP1A1-208ENST00000488733 HSPA8P11142 646 aaKnown RBP21.49■■□□□ 1.03
ATP1A1-208ENST00000488733 CD58P19256 250 aa21.49■■□□□ 1.03
ATP1A1-208ENST00000488733 MRPS6P82932 125 aaKnown RBP21.49■■□□□ 1.03
ATP1A1-208ENST00000488733 CCDC70Q6NSX1 233 aa21.49■■□□□ 1.03
ATP1A1-208ENST00000488733 FBXO38Q6PIJ6 1188 aa21.49■■□□□ 1.03
ATP1A1-208ENST00000488733 MCOLN2Q8IZK6 566 aa21.49■■□□□ 1.03
ATP1A1-208ENST00000488733 TTC39CQ8N584 583 aa21.49■■□□□ 1.03
ATP1A1-208ENST00000488733 NOA1Q8NC60 698 aaKnown RBP21.49■■□□□ 1.03
ATP1A1-208ENST00000488733 TMEM40Q8WWA1 233 aa21.49■■□□□ 1.03
ATP1A1-208ENST00000488733 SNX27Q96L92 541 aa21.49■■□□□ 1.03
ATP1A1-208ENST00000488733 EIF2AQ9BY44 585 aaKnown RBP21.49■■□□□ 1.03
ATP1A1-208ENST00000488733 PARD6BQ9BYG5 372 aa21.49■■□□□ 1.03
ATP1A1-208ENST00000488733 A0A1W2PQ45 241 aaPredicted RBP21.49■■□□□ 1.03
ATP1A1-208ENST00000488733 A0A1W2PQY0 241 aa21.49■■□□□ 1.03
ATP1A1-208ENST00000488733 CITO14578 2027 aa21.49■■□□□ 1.03
ATP1A1-208ENST00000488733 CCL5P13501 91 aa21.49■■□□□ 1.03
ATP1A1-208ENST00000488733 PTPN11Q06124 597 aaPredicted RBP21.49■■□□□ 1.03
ATP1A1-208ENST00000488733 PTGISQ16647 500 aa21.49■■□□□ 1.03
ATP1A1-208ENST00000488733 CTU1Q7Z7A3 348 aaKnown RBP21.49■■□□□ 1.03
ATP1A1-208ENST00000488733 MMGT1Q8N4V1 131 aa21.49■■□□□ 1.03
ATP1A1-208ENST00000488733 SPATA4Q8NEY3 305 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms