RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 CITO14578 2027 aa17.26■□□□□ 0.35
CTDSP1-209ENST00000488627 WDR27A2RRH5 827 aa17.25■□□□□ 0.35
CTDSP1-209ENST00000488627 ZNF233A6NK53 670 aa17.25■□□□□ 0.35
CTDSP1-209ENST00000488627 CLIC2O15247 247 aa17.25■□□□□ 0.35
CTDSP1-209ENST00000488627 DCXO43602 365 aa17.25■□□□□ 0.35
CTDSP1-209ENST00000488627 RPN1P04843 607 aaKnown RBP17.25■□□□□ 0.35
CTDSP1-209ENST00000488627 TYMPP19971 482 aa17.25■□□□□ 0.35
CTDSP1-209ENST00000488627 SP100P23497 879 aaPredicted RBP17.25■□□□□ 0.35
CTDSP1-209ENST00000488627 TFAMQ00059 246 aaKnown RBP17.25■□□□□ 0.35
CTDSP1-209ENST00000488627 SNW1Q13573 536 aaKnown RBP17.25■□□□□ 0.35
CTDSP1-209ENST00000488627 UVSSAQ2YD98 709 aa17.25■□□□□ 0.35
CTDSP1-209ENST00000488627 CTXN3Q4LDR2 81 aa17.25■□□□□ 0.35
CTDSP1-209ENST00000488627 C12orf56Q8IXR9 622 aa17.25■□□□□ 0.35
CTDSP1-209ENST00000488627 C1orf127Q8N9H9 656 aa17.25■□□□□ 0.35
CTDSP1-209ENST00000488627 SMG7Q92540 1137 aaKnown RBP17.25■□□□□ 0.35
CTDSP1-209ENST00000488627 KIAA1586Q9HCI6 787 aa17.25■□□□□ 0.35
CTDSP1-209ENST00000488627 EXOC1Q9NV70 894 aa17.25■□□□□ 0.35
CTDSP1-209ENST00000488627 MUTYHQ9UIF7 546 aa17.25■□□□□ 0.35
CTDSP1-209ENST00000488627 CIZ1Q9ULV3 898 aaPredicted RBP17.25■□□□□ 0.35
CTDSP1-209ENST00000488627 NR2E1Q9Y466 385 aa17.25■□□□□ 0.35
CTDSP1-209ENST00000488627 VWA8A3KMH1 1905 aa17.25■□□□□ 0.35
CTDSP1-209ENST00000488627 N4BP1O75113 896 aaKnown RBP17.24■□□□□ 0.35
CTDSP1-209ENST00000488627 RHOBTB3O94955 611 aa17.24■□□□□ 0.35
CTDSP1-209ENST00000488627 C8AP07357 584 aa17.24■□□□□ 0.35
CTDSP1-209ENST00000488627 HNRNPA1P09651 372 aaKnown RBP eCLIP17.24■□□□□ 0.35
CTDSP1-209ENST00000488627 ATF2P15336 505 aa17.24■□□□□ 0.35
CTDSP1-209ENST00000488627 HOXA9P31269 272 aa17.24■□□□□ 0.35
CTDSP1-209ENST00000488627 YWHAHQ04917 246 aaPredicted RBP17.24■□□□□ 0.35
CTDSP1-209ENST00000488627 ZNF280DQ6N043 979 aa17.24■□□□□ 0.35
CTDSP1-209ENST00000488627 DSTYKQ6XUX3 929 aa17.24■□□□□ 0.35
CTDSP1-209ENST00000488627 RTL10Q7L3V2 364 aa17.24■□□□□ 0.35
CTDSP1-209ENST00000488627 KCTD10Q9H3F6 313 aa17.24■□□□□ 0.35
CTDSP1-209ENST00000488627 TSHZ2Q9NRE2 1034 aa17.24■□□□□ 0.35
CTDSP1-209ENST00000488627 CGNQ9P2M7 1197 aaKnown RBP17.24■□□□□ 0.35
CTDSP1-209ENST00000488627 PTPRJQ12913 1337 aa17.23■□□□□ 0.35
CTDSP1-209ENST00000488627 SEC24AO95486 1093 aa17.23■□□□□ 0.35
CTDSP1-209ENST00000488627 CYP11A1P05108 521 aa17.23■□□□□ 0.35
CTDSP1-209ENST00000488627 POU2F2P09086 479 aa17.23■□□□□ 0.35
CTDSP1-209ENST00000488627 ALADP13716 330 aa17.23■□□□□ 0.35
CTDSP1-209ENST00000488627 ARPP19P56211 112 aa17.23■□□□□ 0.35
CTDSP1-209ENST00000488627 PPM1LQ5SGD2 360 aa17.23■□□□□ 0.35
CTDSP1-209ENST00000488627 LIN9Q5TKA1 542 aa17.23■□□□□ 0.35
CTDSP1-209ENST00000488627 TPGS2Q68CL5 300 aa17.23■□□□□ 0.35
CTDSP1-209ENST00000488627 CCDC149Q6ZUS6 474 aa17.23■□□□□ 0.35
CTDSP1-209ENST00000488627 HS2ST1Q7LGA3 356 aa17.23■□□□□ 0.35
CTDSP1-209ENST00000488627 ZDHHC14Q8IZN3 488 aa17.23■□□□□ 0.35
CTDSP1-209ENST00000488627 XXYLT1Q8NBI6 393 aa17.23■□□□□ 0.35
CTDSP1-209ENST00000488627 RDH13Q8NBN7 331 aa17.23■□□□□ 0.35
CTDSP1-209ENST00000488627 SLC7A14Q8TBB6 771 aa17.23■□□□□ 0.35
CTDSP1-209ENST00000488627 NOC3LQ8WTT2 800 aaKnown RBP17.23■□□□□ 0.35
CTDSP1-209ENST00000488627 CACTINQ8WUQ7 758 aaKnown RBP17.23■□□□□ 0.35
CTDSP1-209ENST00000488627 TMEM174Q8WUU8 243 aa17.23■□□□□ 0.35
CTDSP1-209ENST00000488627 GZF1Q9H116 711 aaPredicted RBP17.23■□□□□ 0.35
CTDSP1-209ENST00000488627 INTS13Q9NVM9 706 aa17.23■□□□□ 0.35
CTDSP1-209ENST00000488627 DMAC2Q9NW81 257 aa17.23■□□□□ 0.35
CTDSP1-209ENST00000488627 SIX4Q9UIU6 781 aa17.23■□□□□ 0.35
CTDSP1-209ENST00000488627 ARHGEF37A1IGU5 675 aa17.22■□□□□ 0.35
CTDSP1-209ENST00000488627 VNN2O95498 520 aa17.22■□□□□ 0.35
CTDSP1-209ENST00000488627 POLR2BP30876 1174 aaKnown RBP17.22■□□□□ 0.35
CTDSP1-209ENST00000488627 TAF6P49848 677 aa17.22■□□□□ 0.35
CTDSP1-209ENST00000488627 CYP2J2P51589 502 aa17.22■□□□□ 0.35
CTDSP1-209ENST00000488627 KCNB1Q14721 858 aa17.22■□□□□ 0.35
CTDSP1-209ENST00000488627 SNRNP35Q16560 246 aaKnown RBP17.22■□□□□ 0.35
CTDSP1-209ENST00000488627 LMBRD2Q68DH5 695 aaPredicted RBP17.22■□□□□ 0.35
CTDSP1-209ENST00000488627 TCEAL8Q8IYN2 117 aa17.22■□□□□ 0.35
CTDSP1-209ENST00000488627 OR5B17Q8NGF7 314 aa17.22■□□□□ 0.35
CTDSP1-209ENST00000488627 MFSD14AQ96MC6 490 aa17.22■□□□□ 0.35
CTDSP1-209ENST00000488627 RTP3Q9BQQ7 232 aa17.22■□□□□ 0.35
CTDSP1-209ENST00000488627 C1QTNF1Q9BXJ1 281 aa17.22■□□□□ 0.35
CTDSP1-209ENST00000488627 OXCT2Q9BYC2 517 aaPredicted RBP17.22■□□□□ 0.35
CTDSP1-209ENST00000488627 MTMR12Q9C0I1 747 aa17.22■□□□□ 0.35
CTDSP1-209ENST00000488627 AGAP1Q9UPQ3 857 aa17.22■□□□□ 0.35
CTDSP1-209ENST00000488627 CLUHO75153 1309 aa17.21■□□□□ 0.35
CTDSP1-209ENST00000488627 PLXNA3P51805 1871 aa17.21■□□□□ 0.35
CTDSP1-209ENST00000488627 OR6C75A6NL08 312 aa17.21■□□□□ 0.35
CTDSP1-209ENST00000488627 KPNA7A9QM74 516 aa17.21■□□□□ 0.35
CTDSP1-209ENST00000488627 CYB561D2O14569 222 aa17.21■□□□□ 0.35
CTDSP1-209ENST00000488627 CCL16O15467 120 aa17.21■□□□□ 0.35
CTDSP1-209ENST00000488627 GPR37L1O60883 481 aa17.21■□□□□ 0.35
CTDSP1-209ENST00000488627 ITGB3P05106 788 aa17.21■□□□□ 0.35
CTDSP1-209ENST00000488627 ODC1P11926 461 aa17.21■□□□□ 0.35
CTDSP1-209ENST00000488627 CYP24A1Q07973 514 aa17.21■□□□□ 0.35
CTDSP1-209ENST00000488627 PSMD6Q15008 389 aa17.21■□□□□ 0.35
CTDSP1-209ENST00000488627 SURF1Q15526 300 aa17.21■□□□□ 0.35
CTDSP1-209ENST00000488627 WSCD1Q658N2 575 aa17.21■□□□□ 0.35
CTDSP1-209ENST00000488627 OVOS1Q6IE37 1185 aa17.21■□□□□ 0.35
CTDSP1-209ENST00000488627 RNF19BQ6ZMZ0 732 aa17.21■□□□□ 0.35
CTDSP1-209ENST00000488627 OTOP3Q7RTS5 596 aa17.21■□□□□ 0.35
CTDSP1-209ENST00000488627 USP37Q86T82 979 aa17.21■□□□□ 0.35
CTDSP1-209ENST00000488627 SLC9A9Q8IVB4 645 aa17.21■□□□□ 0.35
CTDSP1-209ENST00000488627 PLCD3Q8N3E9 789 aa17.21■□□□□ 0.35
CTDSP1-209ENST00000488627 CSGALNACT2Q8N6G5 542 aa17.21■□□□□ 0.35
CTDSP1-209ENST00000488627 LRRC52Q8N7C0 313 aa17.21■□□□□ 0.35
CTDSP1-209ENST00000488627 TDRD5Q8NAT2 981 aaKnown RBP17.21■□□□□ 0.35
CTDSP1-209ENST00000488627 PIDD1Q9HB75 910 aa17.21■□□□□ 0.35
CTDSP1-209ENST00000488627 LIMD1Q9UGP4 676 aa17.21■□□□□ 0.35
CTDSP1-209ENST00000488627 AFF4Q9UHB7 1163 aaKnown RBP17.21■□□□□ 0.35
CTDSP1-209ENST00000488627 ITGA11Q9UKX5 1188 aa17.21■□□□□ 0.35
CTDSP1-209ENST00000488627 TCHHQ07283 1943 aa17.21■□□□□ 0.35
CTDSP1-209ENST00000488627 PDCD11Q14690 1871 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms