RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 PIK3AP1Q6ZUJ8 805 aa6.65□□□□□ -1.34
CDHR3-213ENST00000488386 NIPA1Q7RTP0 329 aa6.65□□□□□ -1.34
CDHR3-213ENST00000488386 RSPH3Q86UC2 560 aa6.65□□□□□ -1.34
CDHR3-213ENST00000488386 KIAA0319LQ8IZA0 1049 aa6.65□□□□□ -1.34
CDHR3-213ENST00000488386 METTL13Q8N6R0 699 aa6.65□□□□□ -1.34
CDHR3-213ENST00000488386 FAM13CQ8NE31 585 aa6.65□□□□□ -1.34
CDHR3-213ENST00000488386 ATP8B4Q8TF62 1192 aa6.65□□□□□ -1.34
CDHR3-213ENST00000488386 TOP1MTQ969P6 601 aa6.65□□□□□ -1.34
CDHR3-213ENST00000488386 TGS1Q96RS0 853 aaKnown RBP6.65□□□□□ -1.34
CDHR3-213ENST00000488386 YME1L1Q96TA2 773 aa6.65□□□□□ -1.34
CDHR3-213ENST00000488386 CELF4Q9BZC1 486 aaKnown RBP6.65□□□□□ -1.34
CDHR3-213ENST00000488386 GLT8D2Q9H1C3 349 aa6.65□□□□□ -1.34
CDHR3-213ENST00000488386 TMX1Q9H3N1 280 aa6.65□□□□□ -1.34
CDHR3-213ENST00000488386 ORC3Q9UBD5 711 aaPredicted RBP6.65□□□□□ -1.34
CDHR3-213ENST00000488386 ZC3H7BQ9UGR2 993 aaKnown RBP6.65□□□□□ -1.34
CDHR3-213ENST00000488386 TCEAL9Q9UHQ7 104 aa6.65□□□□□ -1.34
CDHR3-213ENST00000488386 PADI3Q9ULW8 664 aa6.65□□□□□ -1.34
CDHR3-213ENST00000488386 NOC2LQ9Y3T9 749 aaKnown RBP6.65□□□□□ -1.34
CDHR3-213ENST00000488386 PCDHA2Q9Y5H9 948 aa6.65□□□□□ -1.34
CDHR3-213ENST00000488386 XIRP2A4UGR9 3374 aa6.65□□□□□ -1.35
CDHR3-213ENST00000488386 SCO2A0A1W2PP80 73 aa6.64□□□□□ -1.35
CDHR3-213ENST00000488386 RRN3P2A6NIE6 340 aa6.64□□□□□ -1.35
CDHR3-213ENST00000488386 PRR33A8MZF0 331 aa6.64□□□□□ -1.35
CDHR3-213ENST00000488386 M0QZ92 97 aa6.64□□□□□ -1.35
CDHR3-213ENST00000488386 EPB41L2O43491 1005 aaKnown RBP6.64□□□□□ -1.35
CDHR3-213ENST00000488386 HYAL3O43820 417 aaPredicted RBP6.64□□□□□ -1.35
CDHR3-213ENST00000488386 HBP1O60381 514 aa6.64□□□□□ -1.35
CDHR3-213ENST00000488386 GAS7O60861 476 aa6.64□□□□□ -1.35
CDHR3-213ENST00000488386 EFCAB14O75071 495 aa6.64□□□□□ -1.35
CDHR3-213ENST00000488386 CAND2O75155 1236 aa6.64□□□□□ -1.35
CDHR3-213ENST00000488386 CSDE1O75534 798 aaKnown RBP6.64□□□□□ -1.35
CDHR3-213ENST00000488386 ATE1O95260 518 aa6.64□□□□□ -1.35
CDHR3-213ENST00000488386 CENPBP07199 599 aaPredicted RBP6.64□□□□□ -1.35
CDHR3-213ENST00000488386 MCM4P33991 863 aa6.64□□□□□ -1.35
CDHR3-213ENST00000488386 NEK4P51957 841 aa6.64□□□□□ -1.35
CDHR3-213ENST00000488386 OXCT1P55809 520 aa6.64□□□□□ -1.35
CDHR3-213ENST00000488386 GUCY1B3Q02153 619 aa6.64□□□□□ -1.35
CDHR3-213ENST00000488386 PRKCEQ02156 737 aa6.64□□□□□ -1.35
CDHR3-213ENST00000488386 NONOQ15233 471 aaKnown RBP eCLIP6.64□□□□□ -1.35
CDHR3-213ENST00000488386 MTERF2Q49AM1 385 aa6.64□□□□□ -1.35
CDHR3-213ENST00000488386 CYP27C1Q4G0S4 372 aa6.64□□□□□ -1.35
CDHR3-213ENST00000488386 EPC2Q52LR7 807 aa6.64□□□□□ -1.35
CDHR3-213ENST00000488386 LRCH2Q5VUJ6 765 aa6.64□□□□□ -1.35
CDHR3-213ENST00000488386 PLA2G4FQ68DD2 849 aa6.64□□□□□ -1.35
CDHR3-213ENST00000488386 ZNF746Q6NUN9 644 aaPredicted RBP6.64□□□□□ -1.35
CDHR3-213ENST00000488386 LETMD1Q6P1Q0 360 aa6.64□□□□□ -1.35
CDHR3-213ENST00000488386 MIER3Q7Z3K6 550 aa6.64□□□□□ -1.35
CDHR3-213ENST00000488386 MFSD2AQ8NA29 543 aa6.64□□□□□ -1.35
CDHR3-213ENST00000488386 DNAJB8Q8NHS0 232 aa6.64□□□□□ -1.35
CDHR3-213ENST00000488386 BICD2Q8TD16 824 aa6.64□□□□□ -1.35
CDHR3-213ENST00000488386 APBB2Q92870 758 aa6.64□□□□□ -1.35
CDHR3-213ENST00000488386 SLC5A5Q92911 643 aa6.64□□□□□ -1.35
CDHR3-213ENST00000488386 PHF20Q9BVI0 1012 aa6.64□□□□□ -1.35
CDHR3-213ENST00000488386 TEKT3Q9BXF9 490 aa6.64□□□□□ -1.35
CDHR3-213ENST00000488386 TGIF2Q9GZN2 237 aa6.64□□□□□ -1.35
CDHR3-213ENST00000488386 SH3GLB2Q9NR46 395 aa6.64□□□□□ -1.35
CDHR3-213ENST00000488386 TBC1D22BQ9NU19 505 aa6.64□□□□□ -1.35
CDHR3-213ENST00000488386 INSL6Q9Y581 213 aa6.64□□□□□ -1.35
CDHR3-213ENST00000488386 PCDHA10Q9Y5I2 948 aa6.64□□□□□ -1.35
CDHR3-213ENST00000488386 IGSF9BQ9UPX0 1349 aa6.64□□□□□ -1.35
CDHR3-213ENST00000488386 RALGAPA2Q2PPJ7 1873 aa6.64□□□□□ -1.35
CDHR3-213ENST00000488386 TTC3P53804 2025 aa6.64□□□□□ -1.35
CDHR3-213ENST00000488386 A0A087WWV3 80 aa6.63□□□□□ -1.35
CDHR3-213ENST00000488386 A0A0C4DFX4 3053 aa6.63□□□□□ -1.35
CDHR3-213ENST00000488386 CCDC194A0A1B0GVG4 234 aa6.63□□□□□ -1.35
CDHR3-213ENST00000488386 SMIM35A0A1B0GVV1 85 aa6.63□□□□□ -1.35
CDHR3-213ENST00000488386 GRM6O15303 877 aa6.63□□□□□ -1.35
CDHR3-213ENST00000488386 CCNT1O60563 726 aaKnown RBP6.63□□□□□ -1.35
CDHR3-213ENST00000488386 RPS6KA5O75582 802 aa6.63□□□□□ -1.35
CDHR3-213ENST00000488386 PSMD10O75832 226 aa6.63□□□□□ -1.35
CDHR3-213ENST00000488386 STBD1O95210 358 aa6.63□□□□□ -1.35
CDHR3-213ENST00000488386 LINC00271P0C7V0 271 aa6.63□□□□□ -1.35
CDHR3-213ENST00000488386 ERCC5P28715 1186 aaPredicted RBP6.63□□□□□ -1.35
CDHR3-213ENST00000488386 CTNNB1P35222 781 aa6.63□□□□□ -1.35
CDHR3-213ENST00000488386 GTF2F1P35269 517 aaKnown RBP eCLIP6.63□□□□□ -1.35
CDHR3-213ENST00000488386 GPM6BQ13491 265 aa6.63□□□□□ -1.35
CDHR3-213ENST00000488386 BTG3Q14201 252 aaPredicted RBP6.63□□□□□ -1.35
CDHR3-213ENST00000488386 LONRF3Q496Y0 759 aa6.63□□□□□ -1.35
CDHR3-213ENST00000488386 Q4G0T1 1027 aa6.63□□□□□ -1.35
CDHR3-213ENST00000488386 FNDC1Q4ZHG4 1894 aaPredicted RBP6.63□□□□□ -1.35
CDHR3-213ENST00000488386 ZNF484Q5JVG2 852 aa6.63□□□□□ -1.35
CDHR3-213ENST00000488386 FAM102BQ5T8I3 360 aa6.63□□□□□ -1.35
CDHR3-213ENST00000488386 OVOS1Q6IE37 1185 aa6.63□□□□□ -1.35
CDHR3-213ENST00000488386 EFCAB12Q6NXP0 572 aa6.63□□□□□ -1.35
CDHR3-213ENST00000488386 CPLX2Q6PUV4 134 aaKnown RBP6.63□□□□□ -1.35
CDHR3-213ENST00000488386 EP400NLQ6ZTU2 488 aa6.63□□□□□ -1.35
CDHR3-213ENST00000488386 RPAINQ86UA6 219 aa6.63□□□□□ -1.35
CDHR3-213ENST00000488386 FAM228AQ86W67 206 aa6.63□□□□□ -1.35
CDHR3-213ENST00000488386 CCDC83Q8IWF9 413 aa6.63□□□□□ -1.35
CDHR3-213ENST00000488386 ADGRA3Q8IWK6 1321 aa6.63□□□□□ -1.35
CDHR3-213ENST00000488386 TMEM192Q8IY95 271 aa6.63□□□□□ -1.35
CDHR3-213ENST00000488386 SMAP1Q8IYB5 467 aaPredicted RBP6.63□□□□□ -1.35
CDHR3-213ENST00000488386 SLFN12Q8IYM2 578 aa6.63□□□□□ -1.35
CDHR3-213ENST00000488386 PLD6Q8N2A8 252 aaKnown RBP6.63□□□□□ -1.35
CDHR3-213ENST00000488386 FIBCD1Q8N539 461 aa6.63□□□□□ -1.35
CDHR3-213ENST00000488386 DAGLBQ8NCG7 672 aa6.63□□□□□ -1.35
CDHR3-213ENST00000488386 NSUN7Q8NE18 718 aaKnown RBP6.63□□□□□ -1.35
CDHR3-213ENST00000488386 ETNPPLQ8TBG4 499 aa6.63□□□□□ -1.35
CDHR3-213ENST00000488386 GTF3C6Q969F1 213 aa6.63□□□□□ -1.35
CDHR3-213ENST00000488386 IL17RAQ96F46 866 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms