RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 HPDLQ96IR7 371 aa16.95■□□□□ 0.3
C9orf3-219ENST00000488186 B3GALT6Q96L58 329 aa16.95■□□□□ 0.3
C9orf3-219ENST00000488186 VN1R3Q9BXE9 311 aa16.95■□□□□ 0.3
C9orf3-219ENST00000488186 DNAJC25Q9H1X3 360 aa16.95■□□□□ 0.3
C9orf3-219ENST00000488186 IGFLR1Q9H665 355 aa16.95■□□□□ 0.3
C9orf3-219ENST00000488186 TLE6Q9H808 572 aa16.95■□□□□ 0.3
C9orf3-219ENST00000488186 REV3LO60673 3130 aa16.94■□□□□ 0.3
C9orf3-219ENST00000488186 KPNA7A9QM74 516 aa16.94■□□□□ 0.3
C9orf3-219ENST00000488186 CYB561D2O14569 222 aa16.94■□□□□ 0.3
C9orf3-219ENST00000488186 FSCN2O14926 492 aa16.94■□□□□ 0.3
C9orf3-219ENST00000488186 SYN3O14994 580 aa16.94■□□□□ 0.3
C9orf3-219ENST00000488186 ODC1P11926 461 aa16.94■□□□□ 0.3
C9orf3-219ENST00000488186 IGFBP6P24592 240 aaPredicted RBP16.94■□□□□ 0.3
C9orf3-219ENST00000488186 GTF2H1P32780 548 aa16.94■□□□□ 0.3
C9orf3-219ENST00000488186 GCLMP48507 274 aa16.94■□□□□ 0.3
C9orf3-219ENST00000488186 CLDN10P78369 228 aa16.94■□□□□ 0.3
C9orf3-219ENST00000488186 DSG1Q02413 1049 aa16.94■□□□□ 0.3
C9orf3-219ENST00000488186 SKIV2LQ15477 1246 aaKnown RBP16.94■□□□□ 0.3
C9orf3-219ENST00000488186 CD300LGQ6UXG3 332 aa16.94■□□□□ 0.3
C9orf3-219ENST00000488186 RBM23Q86U06 439 aaKnown RBP16.94■□□□□ 0.3
C9orf3-219ENST00000488186 GPR65Q8IYL9 337 aa16.94■□□□□ 0.3
C9orf3-219ENST00000488186 CCDC150Q8NCX0 1101 aa16.94■□□□□ 0.3
C9orf3-219ENST00000488186 SUSD3Q96L08 255 aa16.94■□□□□ 0.3
C9orf3-219ENST00000488186 SENP8Q96LD8 212 aa16.94■□□□□ 0.3
C9orf3-219ENST00000488186 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.94■□□□□ 0.3
C9orf3-219ENST00000488186 DSEQ9UL01 958 aa16.94■□□□□ 0.3
C9orf3-219ENST00000488186 PCDHB8Q9UN66 801 aa16.94■□□□□ 0.3
C9orf3-219ENST00000488186 ANK1P16157 1881 aa16.94■□□□□ 0.3
C9orf3-219ENST00000488186 PDCD11Q14690 1871 aaKnown RBP16.94■□□□□ 0.3
C9orf3-219ENST00000488186 H7C4K7 107 aa16.93■□□□□ 0.3
C9orf3-219ENST00000488186 HUS1O60921 280 aa16.93■□□□□ 0.3
C9orf3-219ENST00000488186 CST3P01034 146 aaPredicted RBP16.93■□□□□ 0.3
C9orf3-219ENST00000488186 C4BPAP04003 597 aaKnown RBP16.93■□□□□ 0.3
C9orf3-219ENST00000488186 KLRC2P26717 231 aa16.93■□□□□ 0.3
C9orf3-219ENST00000488186 TKTP29401 623 aaKnown RBP16.93■□□□□ 0.3
C9orf3-219ENST00000488186 PIK3CAP42336 1068 aa16.93■□□□□ 0.3
C9orf3-219ENST00000488186 MTIF2P46199 727 aaKnown RBP16.93■□□□□ 0.3
C9orf3-219ENST00000488186 CETN1Q12798 172 aa16.93■□□□□ 0.3
C9orf3-219ENST00000488186 NCOA4Q13772 614 aa16.93■□□□□ 0.3
C9orf3-219ENST00000488186 ZSCAN23Q3MJ62 389 aa16.93■□□□□ 0.3
C9orf3-219ENST00000488186 ANO6Q4KMQ2 910 aa16.93■□□□□ 0.3
C9orf3-219ENST00000488186 TCEAL5Q5H9L2 206 aa16.93■□□□□ 0.3
C9orf3-219ENST00000488186 KIAA0319Q5VV43 1072 aa16.93■□□□□ 0.3
C9orf3-219ENST00000488186 TDRD10Q5VZ19 366 aaKnown RBP16.93■□□□□ 0.3
C9orf3-219ENST00000488186 KRT39Q6A163 491 aa16.93■□□□□ 0.3
C9orf3-219ENST00000488186 EP400NLQ6ZTU2 488 aa16.93■□□□□ 0.3
C9orf3-219ENST00000488186 C11orf57Q6ZUT1 292 aaPredicted RBP16.93■□□□□ 0.3
C9orf3-219ENST00000488186 ANKS3Q6ZW76 656 aa16.93■□□□□ 0.3
C9orf3-219ENST00000488186 SV2AQ7L0J3 742 aa16.93■□□□□ 0.3
C9orf3-219ENST00000488186 ENOX1Q8TC92 643 aaKnown RBP16.93■□□□□ 0.3
C9orf3-219ENST00000488186 BORCS6Q96GS4 357 aa16.93■□□□□ 0.3
C9orf3-219ENST00000488186 IMPG2Q9BZV3 1241 aa16.93■□□□□ 0.3
C9orf3-219ENST00000488186 GZF1Q9H116 711 aaPredicted RBP16.93■□□□□ 0.3
C9orf3-219ENST00000488186 THAP9Q9H5L6 903 aa16.93■□□□□ 0.3
C9orf3-219ENST00000488186 TMEM8AQ9HCN3 771 aa16.93■□□□□ 0.3
C9orf3-219ENST00000488186 CHST7Q9NS84 486 aa16.93■□□□□ 0.3
C9orf3-219ENST00000488186 SIX4Q9UIU6 781 aa16.93■□□□□ 0.3
C9orf3-219ENST00000488186 COG5Q9UP83 839 aa16.93■□□□□ 0.3
C9orf3-219ENST00000488186 PCDHGC5Q9Y5F6 944 aa16.93■□□□□ 0.3
C9orf3-219ENST00000488186 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.93■□□□□ 0.3
C9orf3-219ENST00000488186 SNX9Q9Y5X1 595 aa16.93■□□□□ 0.3
C9orf3-219ENST00000488186 IRAK3Q9Y616 596 aa16.93■□□□□ 0.3
C9orf3-219ENST00000488186 C2orf71A6NGG8 1288 aa16.92■□□□□ 0.3
C9orf3-219ENST00000488186 HIDE1A8MVS5 230 aa16.92■□□□□ 0.3
C9orf3-219ENST00000488186 M0QZQ0 153 aa16.92■□□□□ 0.3
C9orf3-219ENST00000488186 PER2O15055 1255 aa16.92■□□□□ 0.3
C9orf3-219ENST00000488186 EFEMP2O95967 443 aa16.92■□□□□ 0.3
C9orf3-219ENST00000488186 FGFR3P22607 806 aa16.92■□□□□ 0.3
C9orf3-219ENST00000488186 ATICP31939 592 aa16.92■□□□□ 0.3
C9orf3-219ENST00000488186 NRIP1P48552 1158 aa16.92■□□□□ 0.3
C9orf3-219ENST00000488186 MXI1P50539 228 aa16.92■□□□□ 0.3
C9orf3-219ENST00000488186 TNNC1P63316 161 aa16.92■□□□□ 0.3
C9orf3-219ENST00000488186 PTPN14Q15678 1187 aa16.92■□□□□ 0.3
C9orf3-219ENST00000488186 PSMD5Q16401 504 aa16.92■□□□□ 0.3
C9orf3-219ENST00000488186 SGSM1Q2NKQ1 1148 aa16.92■□□□□ 0.3
C9orf3-219ENST00000488186 ZACNQ401N2 412 aa16.92■□□□□ 0.3
C9orf3-219ENST00000488186 RTP2Q5QGT7 225 aa16.92■□□□□ 0.3
C9orf3-219ENST00000488186 RNF168Q8IYW5 571 aaPredicted RBP16.92■□□□□ 0.3
C9orf3-219ENST00000488186 CNOT6LQ96LI5 555 aaKnown RBP16.92■□□□□ 0.3
C9orf3-219ENST00000488186 MMS19Q96T76 1030 aa16.92■□□□□ 0.3
C9orf3-219ENST00000488186 CDCA3Q99618 268 aaPredicted RBP16.92■□□□□ 0.3
C9orf3-219ENST00000488186 NFE2L3Q9Y4A8 694 aa16.92■□□□□ 0.3
C9orf3-219ENST00000488186 TIMM13Q9Y5L4 95 aaPredicted RBP16.92■□□□□ 0.3
C9orf3-219ENST00000488186 SPTLC1O15269 473 aa16.91■□□□□ 0.3
C9orf3-219ENST00000488186 ADH1AP07327 375 aa16.91■□□□□ 0.3
C9orf3-219ENST00000488186 P4HA1P13674 534 aa16.91■□□□□ 0.3
C9orf3-219ENST00000488186 AARSP49588 968 aaKnown RBP eCLIP16.91■□□□□ 0.3
C9orf3-219ENST00000488186 MYL6P60660 151 aa16.91■□□□□ 0.3
C9orf3-219ENST00000488186 MYL5Q02045 173 aa16.91■□□□□ 0.3
C9orf3-219ENST00000488186 YWHAHQ04917 246 aaPredicted RBP16.91■□□□□ 0.3
C9orf3-219ENST00000488186 PPP3CAQ08209 521 aa16.91■□□□□ 0.3
C9orf3-219ENST00000488186 ZNF699Q32M78 642 aa16.91■□□□□ 0.3
C9orf3-219ENST00000488186 HSP90AA4PQ58FG1 418 aa16.91■□□□□ 0.3
C9orf3-219ENST00000488186 WDR44Q5JSH3 913 aa16.91■□□□□ 0.3
C9orf3-219ENST00000488186 VARS2Q5ST30 1063 aaKnown RBP16.91■□□□□ 0.3
C9orf3-219ENST00000488186 C1orf220Q5T0J3 134 aa16.91■□□□□ 0.3
C9orf3-219ENST00000488186 PRSS55Q6UWB4 352 aaPredicted RBP16.91■□□□□ 0.3
C9orf3-219ENST00000488186 PPFIBP1Q86W92 1011 aa16.91■□□□□ 0.3
C9orf3-219ENST00000488186 THEM5Q8N1Q8 247 aa16.91■□□□□ 0.3
C9orf3-219ENST00000488186 LNX1Q8TBB1 728 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms