RNA–Protein interactions for RNA: ENST00000487625.1

USP9X-208, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-208ENST00000487625 OXSMQ9NWU1 459 aa3.31□□□□□ -1.88
USP9X-208ENST00000487625 CDK11AQ9UQ88 783 aaPredicted RBP3.31□□□□□ -1.88
USP9X-208ENST00000487625 SPO11Q9Y5K1 396 aa3.31□□□□□ -1.88
USP9X-208ENST00000487625 A0A087WYN8 130 aa3.3□□□□□ -1.88
USP9X-208ENST00000487625 ST20-MTHFSA0A0A6YYL1 179 aa3.3□□□□□ -1.88
USP9X-208ENST00000487625 A0A1W2PS29 197 aa3.3□□□□□ -1.88
USP9X-208ENST00000487625 DNAJB5O75953 348 aa3.3□□□□□ -1.88
USP9X-208ENST00000487625 POMCP01189 267 aa3.3□□□□□ -1.88
USP9X-208ENST00000487625 TMEM191BP0C7N4 346 aa3.3□□□□□ -1.88
USP9X-208ENST00000487625 PRF1P14222 555 aa3.3□□□□□ -1.88
USP9X-208ENST00000487625 ATP2A2P16615 1042 aaKnown RBP3.3□□□□□ -1.88
USP9X-208ENST00000487625 CTSSP25774 331 aa3.3□□□□□ -1.88
USP9X-208ENST00000487625 PTPN7P35236 360 aa3.3□□□□□ -1.88
USP9X-208ENST00000487625 NOMO3P69849 1222 aa3.3□□□□□ -1.88
USP9X-208ENST00000487625 NOMO1Q15155 1222 aa3.3□□□□□ -1.88
USP9X-208ENST00000487625 NOMO2Q5JPE7 1267 aa3.3□□□□□ -1.88
USP9X-208ENST00000487625 ZNF329Q86UD4 541 aa3.3□□□□□ -1.88
USP9X-208ENST00000487625 GSTO2Q9H4Y5 243 aa3.3□□□□□ -1.88
USP9X-208ENST00000487625 FAM30AQ9NZY2 134 aa3.3□□□□□ -1.88
USP9X-208ENST00000487625 A0A1B0GVY2 172 aa3.29□□□□□ -1.88
USP9X-208ENST00000487625 LCHNA4D1U4 455 aa3.29□□□□□ -1.88
USP9X-208ENST00000487625 ZNF891A8MT65 544 aaPredicted RBP3.29□□□□□ -1.88
USP9X-208ENST00000487625 TNFRSF13BO14836 293 aaPredicted RBP3.29□□□□□ -1.88
USP9X-208ENST00000487625 JTBO76095 146 aa3.29□□□□□ -1.88
USP9X-208ENST00000487625 ABLIM3O94929 683 aa3.29□□□□□ -1.88
USP9X-208ENST00000487625 TOMM40O96008 361 aa3.29□□□□□ -1.88
USP9X-208ENST00000487625 T-ENOLP0DO92 83 aa3.29□□□□□ -1.88
USP9X-208ENST00000487625 PPARAQ07869 468 aa3.29□□□□□ -1.88
USP9X-208ENST00000487625 PABPC4Q13310 644 aaKnown RBP eCLIP3.29□□□□□ -1.88
USP9X-208ENST00000487625 SF3B4Q15427 424 aaKnown RBP eCLIP3.29□□□□□ -1.882e-25■■■□□ 14.6
USP9X-208ENST00000487625 CFAP100Q494V2 611 aa3.29□□□□□ -1.88
USP9X-208ENST00000487625 LCE3CQ5T5A8 94 aa3.29□□□□□ -1.88
USP9X-208ENST00000487625 CEP85Q6P2H3 762 aa3.29□□□□□ -1.88
USP9X-208ENST00000487625 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.29□□□□□ -1.88
USP9X-208ENST00000487625 UBE2R2Q712K3 238 aaPredicted RBP3.29□□□□□ -1.88
USP9X-208ENST00000487625 NXPE1Q8N323 547 aa3.29□□□□□ -1.88
USP9X-208ENST00000487625 WFIKKN2Q8TEU8 576 aa3.29□□□□□ -1.88
USP9X-208ENST00000487625 SH3TC2Q8TF17 1288 aa3.29□□□□□ -1.88
USP9X-208ENST00000487625 C5orf34Q96MH7 638 aa3.29□□□□□ -1.88
USP9X-208ENST00000487625 PNKPQ96T60 521 aa3.29□□□□□ -1.88
USP9X-208ENST00000487625 TTC3P53804 2025 aa3.29□□□□□ -1.88
USP9X-208ENST00000487625 ZNF213O14771 459 aa3.28□□□□□ -1.88
USP9X-208ENST00000487625 TGM5O43548 720 aa3.28□□□□□ -1.88
USP9X-208ENST00000487625 KPNA6O60684 536 aa3.28□□□□□ -1.88
USP9X-208ENST00000487625 RFPL3O75679 317 aa3.28□□□□□ -1.88
USP9X-208ENST00000487625 ASMTLO95671 621 aa3.28□□□□□ -1.88
USP9X-208ENST00000487625 EBLN1P0CF75 366 aa3.28□□□□□ -1.88
USP9X-208ENST00000487625 FLT3P36888 993 aa3.28□□□□□ -1.88
USP9X-208ENST00000487625 HNRNPMP52272 730 aaKnown RBP eCLIP3.28□□□□□ -1.88
USP9X-208ENST00000487625 DSG1Q02413 1049 aa3.28□□□□□ -1.88
USP9X-208ENST00000487625 SLFN5Q08AF3 891 aa3.28□□□□□ -1.88
USP9X-208ENST00000487625 RBMS2Q15434 407 aaKnown RBP3.28□□□□□ -1.88
USP9X-208ENST00000487625 SF3A1Q15459 793 aaKnown RBP3.28□□□□□ -1.88
USP9X-208ENST00000487625 AFMIDQ63HM1 303 aa3.28□□□□□ -1.88
USP9X-208ENST00000487625 C8orf58Q8NAV2 365 aa3.28□□□□□ -1.88
USP9X-208ENST00000487625 CHTF18Q8WVB6 975 aa3.28□□□□□ -1.88
USP9X-208ENST00000487625 ORAI3Q9BRQ5 295 aa3.28□□□□□ -1.88
USP9X-208ENST00000487625 MS4A5Q9H3V2 200 aa3.28□□□□□ -1.88
USP9X-208ENST00000487625 KLC4Q9NSK0 619 aa3.28□□□□□ -1.88
USP9X-208ENST00000487625 ADGRA2Q96PE1 1338 aa3.27□□□□□ -1.89
USP9X-208ENST00000487625 F2P00734 622 aa3.27□□□□□ -1.89
USP9X-208ENST00000487625 PLGP00747 810 aaPredicted RBP3.27□□□□□ -1.89
USP9X-208ENST00000487625 PPP3CBP16298 524 aa3.27□□□□□ -1.89
USP9X-208ENST00000487625 CD40P25942 277 aa3.27□□□□□ -1.89
USP9X-208ENST00000487625 CDKN2AP42771 156 aaKnown RBP3.27□□□□□ -1.89
USP9X-208ENST00000487625 KRTAP10-8P60410 259 aa3.27□□□□□ -1.89
USP9X-208ENST00000487625 NFE2L2Q16236 605 aa3.27□□□□□ -1.89
USP9X-208ENST00000487625 C21orf62-AS1Q17RA5 79 aa3.27□□□□□ -1.89
USP9X-208ENST00000487625 CUZD1Q86UP6 607 aa3.27□□□□□ -1.89
USP9X-208ENST00000487625 LYSMD2Q8IV50 215 aa3.27□□□□□ -1.89
USP9X-208ENST00000487625 SLC41A1Q8IVJ1 513 aa3.27□□□□□ -1.89
USP9X-208ENST00000487625 ZZZ3Q8IYH5 903 aa3.27□□□□□ -1.89
USP9X-208ENST00000487625 EFHBQ8N7U6 833 aa3.27□□□□□ -1.89
USP9X-208ENST00000487625 RFKQ969G6 155 aa3.27□□□□□ -1.89
USP9X-208ENST00000487625 ZNF496Q96IT1 587 aaPredicted RBP3.27□□□□□ -1.89
USP9X-208ENST00000487625 PBKQ96KB5 322 aa3.27□□□□□ -1.89
USP9X-208ENST00000487625 LMLNQ96KR4 655 aa3.27□□□□□ -1.89
USP9X-208ENST00000487625 FOXP1Q9H334 677 aaPredicted RBP3.27□□□□□ -1.89
USP9X-208ENST00000487625 THG1LQ9NWX6 298 aaKnown RBP3.27□□□□□ -1.89
USP9X-208ENST00000487625 MAGEC2Q9UBF1 373 aaPredicted RBP3.27□□□□□ -1.89
USP9X-208ENST00000487625 TMPRSS11EQ9UL52 423 aa3.27□□□□□ -1.89
USP9X-208ENST00000487625 PRAMEF33A0A0G2JMD5 474 aa3.26□□□□□ -1.89
USP9X-208ENST00000487625 PRAMEF10O60809 474 aa3.26□□□□□ -1.89
USP9X-208ENST00000487625 CGAP01215 116 aa3.26□□□□□ -1.89
USP9X-208ENST00000487625 CRYABP02511 175 aaKnown RBP3.26□□□□□ -1.89
USP9X-208ENST00000487625 NR2F6P10588 404 aa3.26□□□□□ -1.89
USP9X-208ENST00000487625 PCSK6P29122 969 aa3.26□□□□□ -1.89
USP9X-208ENST00000487625 LRRC32Q14392 662 aa3.26□□□□□ -1.89
USP9X-208ENST00000487625 MST1LQ2TV78 715 aa3.26□□□□□ -1.89
USP9X-208ENST00000487625 NUP133Q8WUM0 1156 aa3.26□□□□□ -1.89
USP9X-208ENST00000487625 SSH1Q8WYL5 1049 aa3.26□□□□□ -1.89
USP9X-208ENST00000487625 MRFAP1L1Q96HT8 127 aa3.26□□□□□ -1.89
USP9X-208ENST00000487625 GJB4Q9NTQ9 266 aa3.26□□□□□ -1.89
USP9X-208ENST00000487625 TRMT13Q9NUP7 481 aaKnown RBP3.26□□□□□ -1.89
USP9X-208ENST00000487625 IFT57Q9NWB7 429 aa3.26□□□□□ -1.89
USP9X-208ENST00000487625 MSRAQ9UJ68 235 aa3.26□□□□□ -1.89
USP9X-208ENST00000487625 CD2APQ9Y5K6 639 aa3.26□□□□□ -1.89
USP9X-208ENST00000487625 PRSS38A1L453 326 aa3.25□□□□□ -1.89
USP9X-208ENST00000487625 GRID2O43424 1007 aa3.25□□□□□ -1.89
USP9X-208ENST00000487625 SLC28A2O43868 658 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms