RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 OR2I1PQ8NGU4 316 aa4.52□□□□□ -1.69
SNRNP27-204ENST00000487029 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.52□□□□□ -1.69
SNRNP27-204ENST00000487029 CAGE1Q8TC20 777 aa4.52□□□□□ -1.69
SNRNP27-204ENST00000487029 ZNF480Q8WV37 535 aa4.52□□□□□ -1.69
SNRNP27-204ENST00000487029 SMG7Q92540 1137 aaKnown RBP4.52□□□□□ -1.69
SNRNP27-204ENST00000487029 HOXB13Q92826 284 aaPredicted RBP4.52□□□□□ -1.69
SNRNP27-204ENST00000487029 ZNF778Q96MU6 729 aa4.52□□□□□ -1.69
SNRNP27-204ENST00000487029 KRTAP1-5Q9BYS1 174 aa4.52□□□□□ -1.69
SNRNP27-204ENST00000487029 SLC29A3Q9BZD2 475 aa4.52□□□□□ -1.69
SNRNP27-204ENST00000487029 ARNT2Q9HBZ2 717 aa4.52□□□□□ -1.69
SNRNP27-204ENST00000487029 SLC52A1Q9NWF4 448 aa4.52□□□□□ -1.69
SNRNP27-204ENST00000487029 MAST3O60307 1309 aa4.51□□□□□ -1.69
SNRNP27-204ENST00000487029 FRMPD2Q68DX3 1309 aaPredicted RBP4.51□□□□□ -1.69
SNRNP27-204ENST00000487029 H3BML4 177 aa4.51□□□□□ -1.69
SNRNP27-204ENST00000487029 RPLP2P05387 115 aaKnown RBP4.51□□□□□ -1.69
SNRNP27-204ENST00000487029 ADSLP30566 484 aaPredicted RBP4.51□□□□□ -1.69
SNRNP27-204ENST00000487029 IL10RAQ13651 578 aa4.51□□□□□ -1.69
SNRNP27-204ENST00000487029 ZNF169Q14929 603 aaPredicted RBP4.51□□□□□ -1.69
SNRNP27-204ENST00000487029 FAM102AQ5T9C2 384 aaPredicted RBP4.51□□□□□ -1.69
SNRNP27-204ENST00000487029 DENND1CQ8IV53 801 aa4.51□□□□□ -1.69
SNRNP27-204ENST00000487029 SH2D3CQ8N5H7 860 aa4.51□□□□□ -1.69
SNRNP27-204ENST00000487029 CAMKK1Q8N5S9 505 aa4.51□□□□□ -1.69
SNRNP27-204ENST00000487029 ZNF366Q8N895 744 aa4.51□□□□□ -1.69
SNRNP27-204ENST00000487029 Q8N9P0 234 aaPredicted RBP4.51□□□□□ -1.69
SNRNP27-204ENST00000487029 ZBTB34Q8NCN2 500 aa4.51□□□□□ -1.69
SNRNP27-204ENST00000487029 ACO2Q99798 780 aaKnown RBP4.51□□□□□ -1.69
SNRNP27-204ENST00000487029 MANSC1Q9H8J5 431 aa4.51□□□□□ -1.69
SNRNP27-204ENST00000487029 SEMA4GQ9NTN9 838 aa4.51□□□□□ -1.69
SNRNP27-204ENST00000487029 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.51□□□□□ -1.69
SNRNP27-204ENST00000487029 DDX20Q9UHI6 824 aaKnown RBP4.51□□□□□ -1.69
SNRNP27-204ENST00000487029 ZMYM3Q14202 1370 aa4.51□□□□□ -1.69
SNRNP27-204ENST00000487029 PRR5-ARHGAP8B1AHC4 643 aa4.5□□□□□ -1.69
SNRNP27-204ENST00000487029 SGTAO43765 313 aa4.5□□□□□ -1.69
SNRNP27-204ENST00000487029 PLIN1O60240 522 aa4.5□□□□□ -1.69
SNRNP27-204ENST00000487029 MAP4K4O95819 1239 aaPredicted RBP4.5□□□□□ -1.69
SNRNP27-204ENST00000487029 CTGFP29279 349 aa4.5□□□□□ -1.69
SNRNP27-204ENST00000487029 KRTAP10-6P60371 365 aaPredicted RBP4.5□□□□□ -1.69
SNRNP27-204ENST00000487029 DSC2Q02487 901 aa4.5□□□□□ -1.69
SNRNP27-204ENST00000487029 MAP9Q49MG5 647 aa4.5□□□□□ -1.69
SNRNP27-204ENST00000487029 DRICH1Q6PGQ1 229 aaPredicted RBP4.5□□□□□ -1.69
SNRNP27-204ENST00000487029 Q6ZVL8 140 aa4.5□□□□□ -1.69
SNRNP27-204ENST00000487029 TTC7BQ86TV6 843 aa4.5□□□□□ -1.69
SNRNP27-204ENST00000487029 RHOT1Q8IXI2 618 aa4.5□□□□□ -1.69
SNRNP27-204ENST00000487029 RNF169Q8NCN4 708 aa4.5□□□□□ -1.69
SNRNP27-204ENST00000487029 OR7D4Q8NG98 312 aa4.5□□□□□ -1.69
SNRNP27-204ENST00000487029 KAT5Q92993 513 aa4.5□□□□□ -1.69
SNRNP27-204ENST00000487029 TTC17Q96AE7 1141 aa4.5□□□□□ -1.69
SNRNP27-204ENST00000487029 TIFAQ96CG3 184 aa4.5□□□□□ -1.69
SNRNP27-204ENST00000487029 CYFIP2Q96F07 1278 aa4.5□□□□□ -1.69
SNRNP27-204ENST00000487029 DUSP26Q9BV47 211 aa4.5□□□□□ -1.69
SNRNP27-204ENST00000487029 FAM204AQ9H8W3 233 aa4.5□□□□□ -1.69
SNRNP27-204ENST00000487029 BCO1Q9HAY6 547 aa4.5□□□□□ -1.69
SNRNP27-204ENST00000487029 KIAA1586Q9HCI6 787 aa4.5□□□□□ -1.69
SNRNP27-204ENST00000487029 KMT5AQ9NQR1 393 aa4.5□□□□□ -1.69
SNRNP27-204ENST00000487029 MAN1C1Q9NR34 630 aa4.5□□□□□ -1.69
SNRNP27-204ENST00000487029 USP15Q9Y4E8 981 aaPredicted RBP4.5□□□□□ -1.69
SNRNP27-204ENST00000487029 PCDHB1Q9Y5F3 818 aa4.5□□□□□ -1.69
SNRNP27-204ENST00000487029 PCDHA13Q9Y5I0 950 aa4.5□□□□□ -1.69
SNRNP27-204ENST00000487029 DIRC3C9JPN6 131 aa4.49□□□□□ -1.69
SNRNP27-204ENST00000487029 SLC16A6O15403 523 aa4.49□□□□□ -1.69
SNRNP27-204ENST00000487029 TUSC2O75896 110 aa4.49□□□□□ -1.69
SNRNP27-204ENST00000487029 GASTP01350 101 aa4.49□□□□□ -1.69
SNRNP27-204ENST00000487029 ALDH2P05091 517 aa4.49□□□□□ -1.69
SNRNP27-204ENST00000487029 TRIM27P14373 513 aa4.49□□□□□ -1.69
SNRNP27-204ENST00000487029 CRHR1P34998 444 aa4.49□□□□□ -1.69
SNRNP27-204ENST00000487029 SLC6A9P48067 706 aa4.49□□□□□ -1.69
SNRNP27-204ENST00000487029 ZNF81P51508 661 aa4.49□□□□□ -1.69
SNRNP27-204ENST00000487029 PER3P56645 1201 aa4.49□□□□□ -1.69
SNRNP27-204ENST00000487029 CDC42EP1Q00587 391 aa4.49□□□□□ -1.69
SNRNP27-204ENST00000487029 DUSP2Q05923 314 aa4.49□□□□□ -1.69
SNRNP27-204ENST00000487029 THEMIS2Q5TEJ8 643 aa4.49□□□□□ -1.69
SNRNP27-204ENST00000487029 CYB5RLQ6IPT4 315 aa4.49□□□□□ -1.69
SNRNP27-204ENST00000487029 KSR2Q6VAB6 950 aa4.49□□□□□ -1.69
SNRNP27-204ENST00000487029 CHST15Q7LFX5 561 aaPredicted RBP4.49□□□□□ -1.69
SNRNP27-204ENST00000487029 OVCH2Q7RTZ1 564 aa4.49□□□□□ -1.69
SNRNP27-204ENST00000487029 SRGAP1Q7Z6B7 1085 aa4.49□□□□□ -1.69
SNRNP27-204ENST00000487029 GPR149Q86SP6 731 aa4.49□□□□□ -1.69
SNRNP27-204ENST00000487029 DRC7Q8IY82 874 aa4.49□□□□□ -1.69
SNRNP27-204ENST00000487029 PQLC1Q8N2U9 271 aa4.49□□□□□ -1.69
SNRNP27-204ENST00000487029 PPP1R35Q8TAP8 253 aa4.49□□□□□ -1.69
SNRNP27-204ENST00000487029 NSUN6Q8TEA1 469 aaKnown RBP4.49□□□□□ -1.69
SNRNP27-204ENST00000487029 RGMAQ96B86 450 aa4.49□□□□□ -1.69
SNRNP27-204ENST00000487029 UHRF1Q96T88 793 aaPredicted RBP4.49□□□□□ -1.69
SNRNP27-204ENST00000487029 SARGQ9BW04 601 aa4.49□□□□□ -1.69
SNRNP27-204ENST00000487029 C1QTNF7Q9BXJ2 289 aa4.49□□□□□ -1.69
SNRNP27-204ENST00000487029 LANCL2Q9NS86 450 aa4.49□□□□□ -1.69
SNRNP27-204ENST00000487029 TDP1Q9NUW8 608 aa4.49□□□□□ -1.69
SNRNP27-204ENST00000487029 GPRC5DQ9NZD1 345 aa4.49□□□□□ -1.69
SNRNP27-204ENST00000487029 SIK3Q9Y2K2 1263 aa4.49□□□□□ -1.69
SNRNP27-204ENST00000487029 A6NNZ2 444 aa4.48□□□□□ -1.69
SNRNP27-204ENST00000487029 FAM227AF5H4B4 570 aa4.48□□□□□ -1.69
SNRNP27-204ENST00000487029 ITGA10O75578 1167 aa4.48□□□□□ -1.69
SNRNP27-204ENST00000487029 UBXN7O94888 489 aa4.48□□□□□ -1.69
SNRNP27-204ENST00000487029 FTLP02792 175 aaPredicted RBP4.48□□□□□ -1.69
SNRNP27-204ENST00000487029 MYBP10242 640 aa4.48□□□□□ -1.69
SNRNP27-204ENST00000487029 SREBF1P36956 1147 aa4.48□□□□□ -1.69
SNRNP27-204ENST00000487029 RARRES1P49788 294 aa4.48□□□□□ -1.69
SNRNP27-204ENST00000487029 BLOC1S1P78537 153 aa4.48□□□□□ -1.69
SNRNP27-204ENST00000487029 MAPK7Q13164 816 aa4.48□□□□□ -1.69
SNRNP27-204ENST00000487029 GALEQ14376 348 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms